Search Results - "Marı́n, Carmen"

a‑ARM: Automatic Rhodopsin Modeling with Chromophore Cavity Generation, Ionization State Selection, and External Counterion Placement by Pedraza-González, Laura, De Vico, Luca, Marı́n, Marı́a del Carmen, Fanelli, Francesca, Olivucci, Massimo

“…The Automatic Rhodopsin Modeling (ARM) protocol has recently been proposed as a tool for the fast and parallel generation of basic hybrid quantum…”
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Red-shifting mutation of light-driven sodium-pump rhodopsin by Inoue, Keiichi, del Carmen Marín, María, Tomida, Sahoko, Nakamura, Ryoko, Nakajima, Yuta, Olivucci, Massimo, Kandori, Hideki

“…Microbial rhodopsins are photoreceptive membrane proteins that transport various ions using light energy. While they are widely used in optogenetics to…”
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plasma membrane Na⁺/H⁺ antiporter SOS1 is essential for salt tolerance in tomato and affects the partitioning of Na⁺ between plant organs by OLÍAS, RAQUEL, ELJAKAOUI, ZAKIA, LI, JUN, DE MORALES, PAZ ALVAREZ, MARÍN-MANZANO, MARI CARMEN, PARDO, JOSE M, BELVER, ANDRÉS

“…We have identified a plasma membrane Na⁺/H⁺ antiporter gene from tomato (Solanum lycopersicum), SlSOS1, and used heterologous expression in yeast to confirm…”
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Hydrogen-Bonding and Hydrophobic Interaction Networks as Structural Determinants of Microbial Rhodopsin Function by Bertalan, Éva, Konno, Masae, del Carmen Marín, María, Bagherzadeh, Reza, Nagata, Takashi, Brown, Leonid, Inoue, Keiichi, Bondar, Ana-Nicoleta

“…Microbial pump rhodopsins are highly versatile light-driven membrane proteins that couple protein conformational dynamics with ion translocation across the…”
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Environmental benchmarking of building typologies through BIM-based combinatorial case studies by Martínez-Rocamora, Alejandro, Rivera-Gómez, Carlos, Galán-Marín, Carmen, Marrero, Madelyn

“…Integrated life-cycle assessment (LCA) tools have emerged as decision-making support for BIM practitioners during the design stage of sustainable projects…”
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Effect of N‐acetylcysteine on motivation, seeking and relapse to ethanol self‐administration by Lebourgeois, Sophie, González‐Marín, María Carmen, Jeanblanc, Jerome, Naassila, Mickael, Vilpoux, Catherine

“…Alcohol use disorder is a chronic and highly relapsing disorder, characterized by a loss of control over alcohol consumption and craving. Several studies…”
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Excitability is increased in hippocampal CA1 pyramidal cells of Fmr1 knockout mice by Luque, M Angeles, Beltran-Matas, Pablo, Marin, M Carmen, Torres, Blas, Herrero, Luis

“…Fragile X syndrome (FXS) is caused by a failure of neuronal cells to express the gene encoding the fragile mental retardation protein (FMRP). Clinical features…”
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Toward Automatic Rhodopsin Modeling as a Tool for High-Throughput Computational Photobiology by Melaccio, Federico, del Carmen Marín, María, Valentini, Alessio, Montisci, Fabio, Rinaldi, Silvia, Cherubini, Marco, Yang, Xuchun, Kato, Yoshitaka, Stenrup, Michael, Orozco-Gonzalez, Yoelvis, Ferré, Nicolas, Luk, Hoi Ling, Kandori, Hideki, Olivucci, Massimo

“…We report on a prototype protocol for the automatic and fast construction of congruous sets of QM/MM models of rhodopsin-like photoreceptors and of their…”
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Extending the adaptive thermal comfort models for courtyards by Diz-Mellado, Eduardo, López-Cabeza, Victoria Patricia, Rivera-Gómez, Carlos, Galán-Marín, Carmen, Rojas-Fernández, Juan, Nikolopoulou, Marialena

“…Temperatures in Mediterranean cities are rising due to the effects of climate change, with a consequent increase in the heat waves frequency. Recent research…”
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Performance evaluation and users’ perception of courtyards role in indoor areas of mediterranean social housing by Diz-Mellado, Eduardo, López-Cabeza, Victoria Patricia, Rivera-Gómez, Carlos, Galán-Marín, Carmen

“…Cities confront two critical challenges: general overheating and inefficient use of energy resources within their housing buildings, both adversely affecting…”
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A Clustering Study of Sociodemographic Data, Dietary Patterns, and Gut Microbiota in Healthy and Breast Cancer Women Participating in the MICROMA Study by Ruiz‐Marín, Carmen María, Isabel Álvarez‐Mercado, Ana, Plaza‐Díaz, Julio, Rodríguez‐Lara, Avilene, Gallart‐Aragón, Tania, Sánchez‐Barrón, María Teresa, Lartategui, Saturnino de Reyes, Alcaide‐Lucena, Miriam, Fernández, Mariana F., Fontana, Luis

“…Scope This work is part of the clinical study NCT03885648 registered in ClinicalTrials.gov, aimed at studying the relationship among breast cancer, microbiota,…”
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Structural characterization of proton-pumping rhodopsin lacking a cytoplasmic proton donor residue by X-ray crystallography by Suzuki, Kano, del Carmen Marín, María, Konno, Masae, Bagherzadeh, Reza, Murata, Takeshi, Inoue, Keiichi

“…DTG/DTS rhodopsin, which was named based on a three-residue motif (DTG or DTS) that is important for its function, is a light-driven proton-pumping microbial…”
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Fluorescence Enhancement of a Microbial Rhodopsin via Electronic Reprogramming by Marín, María del Carmen, Agathangelou, Damianos, Orozco-Gonzalez, Yoelvis, Valentini, Alessio, Kato, Yoshitaka, Abe-Yoshizumi, Rei, Kandori, Hideki, Choi, Ahreum, Jung, Kwang-Hwan, Haacke, Stefan, Olivucci, Massimo

“…The engineering of microbial rhodopsins with enhanced fluorescence is of great importance in the expanding field of optogenetics. Here we report the discovery…”
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Circulating levels of endothelial function are modulated by dietary monounsaturated fat by Pérez-Jiménez, Francisco, Castro, Pedro, López-Miranda, José, Paz-Rojas, Elier, Blanco, Angeles, López-Segura, Fernando, Velasco, Francisco, Marı́n, Carmen, Fuentes, Francisco, Ordovás, José M

“…Background: For the most part, the benefits of monounsaturated-rich diets (MUFA-diet) have been related to their action on plasma lipid levels. However other…”
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Web-ARM: A Web-Based Interface for the Automatic Construction of QM/MM Models of Rhodopsins by Pedraza-González, Laura, Marín, María Del Carmen, Jorge, Alejandro N, Ruck, Tyler D, Yang, Xuchun, Valentini, Alessio, Olivucci, Massimo, De Vico, Luca

“…This article introduces Web-ARM, a specialized tool, online available, designed to build quantum mechanical/molecular mechanical models of rhodopsins, a widely…”
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Mediterranean diet and endothelial function in patients with coronary heart disease: An analysis of the CORDIOPREV randomized controlled trial by Yubero-Serrano, Elena M., Fernandez-Gandara, Carolina, Garcia-Rios, Antonio, Rangel-Zuñiga, Oriol A., Gutierrez-Mariscal, Francisco M., Torres-Peña, Jose D., Marin, Carmen, Lopez-Moreno, Javier, Castaño, Justo P., Delgado-Lista, Javier, Ordovas, Jose M., Perez-Martinez, Pablo, Lopez-Miranda, Jose

“…BACKGROUNDEndothelial dysfunction is a crucial step in atherosclerosis development, and its severity is determinant for the risk of cardiovascular recurrence…”
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Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes by Muñoz-Marín, María Del Carmen, Magasin, Jonathan D, Zehr, Jonathan P

“…Decades of research on marine N2 fixation focused on Trichodesmium, which are generally free-living cyanobacteria, but in recent years the endosymbiotic…”
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Association of breast and gut microbiota dysbiosis and the risk of breast cancer: a case-control clinical study by Plaza-Díaz, Julio, Álvarez-Mercado, Ana I, Ruiz-Marín, Carmen M, Reina-Pérez, Iris, Pérez-Alonso, Alejandro J, Sánchez-Andujar, María Belén, Torné, Pablo, Gallart-Aragón, Tania, Sánchez-Barrón, María Teresa, Reyes Lartategui, Saturnino, García, Federico, Chueca, Natalia, Moreno-Delgado, Ana, Torres-Martínez, Katia, Sáez-Lara, María José, Robles-Sánchez, Cándido, Fernández, Mariana F, Fontana, Luis

“…Breast cancer ranks first in women, and is the second cause of death in this gender. In addition to genetics, the environment contributes to the development of…”
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Unravelling the impact of courtyard geometry on cooling energy consumption in buildings by Diz-Mellado, Eduardo, Ruiz-Pardo, Álvaro, Rivera-Gómez, Carlos, Sanchez de la Flor, Francisco José, Galán-Marín, Carmen

“…At present, the energy used for air conditioning in buildings in urban areas accounts for over 36% of total global energy consumption. Energy efficiency has…”
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Assessing the impact of courtyards in cooling energy demand in buildings by Sánchez de la Flor, Francisco José, Ruiz-Pardo, Álvaro, Diz-Mellado, Eduardo, Rivera-Gómez, Carlos, Galán-Marín, Carmen

“…Sustainable passive design strategies can reduce the energy consumption of buildings. In this regard, inner courtyards act as microclimate modifiers that…”
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