Search Results - "Machulin, Andrey"

The number of domains in the ribosomal protein S1 as a hallmark of the phylogenetic grouping of bacteria by Machulin, Andrey V, Deryusheva, Evgenia I, Selivanova, Olga M, Galzitskaya, Oxana V

“…The family of ribosomal proteins S1 contains about 20% of all bacterial proteins including the S1 domain. An important feature of this family is multiple…”
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Variation in base composition, structure-function relationships, and origins of structural repetition in bacterial rpsA gene by Machulin, Andrey V., Deryusheva, Evgeniya I., Galzitskaya, Oxana V.

“…Protein domain repeats are known to arise due to tandem duplications of internal genes. However, the understanding of the underlying mechanisms of this process…”
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Interchangeability of class I and II fumarases in an obligate methanotroph Methylotuvimicrobium alcaliphilum 20Z by Melnikov, Oleg I, Mustakhimov, Ildar I, Reshetnikov, Alexander S, Molchanov, Maxim V, Machulin, Andrey V, Khmelenina, Valentina N, Rozova, Olga N

“…The methanotrophic bacterium Methylotuvimicrobium alcaliphilum 20Z is an industrially promising candidate for bioconversion of methane into value-added…”
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Repeats in S1 Proteins: Flexibility and Tendency for Intrinsic Disorder by Machulin, Andrey, Deryusheva, Evgenia, Lobanov, Mikhail, Galzitskaya, Oxana

“…An important feature of ribosomal S1 proteins is multiple copies of structural domains in bacteria, the number of which changes in a strictly limited range…”
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Impact of hydrophilic polymers in organosilica matrices on structure, stability, and biocatalytic activity of immobilized methylotrophic yeast used as biofilter bed by Lavrova, Daria G., Kamanina, Olga A., Alferov, Valery A., Rybochkin, Pavel V., Machulin, Andrey V., Sidorov, Alexander I., Ponamoreva, Olga N.

“…[Display omitted] •Artificial shells are built around yeasts using TEOS, MTES, and structure-directing agents.•Whole-cell biocatalyst was stable when stored…”
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Investigation of the Relationship between the S1 Domain and Its Molecular Functions Derived from Studies of the Tertiary Structure by Deryusheva, Evgenia I, Machulin, Andrey V, Matyunin, Maxim A, Galzitskaya, Oxana V

“…S1 domain, a structural variant of one of the "oldest" OB-folds (oligonucleotide/oligosaccharide-binding fold), is widespread in various proteins in three…”
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Amyloidogenic Propensities of Ribosomal S1 Proteins: Bioinformatics Screening and Experimental Checking by Grishin, Sergei Y, Deryusheva, Evgeniya I, Machulin, Andrey V, Selivanova, Olga M, Glyakina, Anna V, Gorbunova, Elena Y, Mustaeva, Leila G, Azev, Vyacheslav N, Rekstina, Valentina V, Kalebina, Tatyana S, Surin, Alexey K, Galzitskaya, Oxana V

“…Structural S1 domains belong to the superfamily of oligosaccharide/oligonucleotide-binding fold domains, which are highly conserved from prokaryotes to higher…”
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Electroactive Biofilms of Activated Sludge Microorganisms on a Nanostructured Surface as the Basis for a Highly Sensitive Biochemical Oxygen Demand Biosensor by Kurbanalieva, Saniyat, Arlyapov, Vyacheslav, Kharkova, Anna, Perchikov, Roman, Kamanina, Olga, Melnikov, Pavel, Popova, Nadezhda, Machulin, Andrey, Tarasov, Sergey, Saverina, Evgeniya, Vereshchagin, Anatoly, Reshetilov, Anatoly

“…The possibility of the developing a biochemical oxygen demand (BOD) biosensor based on electroactive biofilms of activated sludge grown on the surface of a…”
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Diversity and features of proteins with structural repeats by Deryusheva, Evgeniya I., Machulin, Andrey V., Galzitskaya, Oxana V.

“…The review provides information on proteins with structural repeats, including their classification, characteristics, functions, and relevance in disease…”
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In Search for Low-Molecular-Weight Ligands of Human Serum Albumin That Affect Its Affinity for Monomeric Amyloid β Peptide by Deryusheva, Evgenia I, Shevelyova, Marina P, Rastrygina, Victoria A, Nemashkalova, Ekaterina L, Vologzhannikova, Alisa A, Machulin, Andrey V, Nazipova, Alija A, Permyakova, Maria E, Permyakov, Sergei E, Litus, Ekaterina A

“…An imbalance between production and excretion of amyloid β peptide (Aβ) in the brain tissues of Alzheimer's disease (AD) patients leads to Aβ accumulation and…”
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S-layer protein 2 of vaginal Lactobacillus crispatus 2029 enhances growth, differentiation, VEGF production and barrier functions in intestinal epithelial cell line Caco-2 by Abramov, Vyacheslav M., Kosarev, Igor V., Priputnevich, Tatiana V., Machulin, Andrey V., Abashina, Tatiana N., Chikileva, Irina O., Donetskova, Almira D., Takada, Kazuhide, Melnikov, Vyacheslav G., Vasilenko, Raisa N., Khlebnikov, Valentin S., Samoilenko, Vladimir A., Nikonov, Ilya N., Sukhikh, Gennady T., Uversky, Vladimir N., Karlyshev, Andrey V.

“…We have previously demonstrated the ability of the human vaginal strain Lactobacillus crispatus 2029 (LC2029) for strong adhesion to cervicovaginal epithelial…”
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Heparin-Induced Changes of Vascular Endothelial Growth Factor (VEGF 165 ) Structure by Nemashkalova, Ekaterina L, Shevelyova, Marina P, Machulin, Andrey V, Lykoshin, Dmitry D, Esipov, Roman S, Deryusheva, Evgenia I

“…Vascular endothelial growth factor-A (VEGF-A), a secreted homodimeric glycoprotein, is a critical regulator of angiogenesis in normal and pathological states…”
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Amyloidogenic Peptides: New Class of Antimicrobial Peptides with the Novel Mechanism of Activity by Galzitskaya, Oxana V, Kurpe, Stanislav R, Panfilov, Alexander V, Glyakina, Anna V, Grishin, Sergei Y, Kochetov, Alexey P, Deryusheva, Evgeniya I, Machulin, Andrey V, Kravchenko, Sergey V, Domnin, Pavel A, Surin, Alexey K, Azev, Viacheslav N, Ermolaeva, Svetlana A

“…Antibiotic-resistant bacteria are recognized as one of the leading causes of death in the world. We proposed and successfully tested peptides with a new…”
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Ancylobacter radicis sp. nov., a novel aerobic methylotrophic bacteria associated with plants by Agafonova, Nadezhda V., Belova, Alina A., Kaparullina, Elena N., Tarlachkov, Sergey V., Kopitsyn, Dmitry S., Machulin, Andrey V., Doronina, Nina V.

“…The two novel bacterial strains, designated as VT T and ML, were isolated from roots of cinquefoil ( Potentilla sp.) and leaves of meadow-grass ( Poa sp.) on…”
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Virtual Screening of Human Serum Albumin Mutants to Optimize the Search for its Forms that Increase Affinity to Amyloid-Β Peptide by Deryusheva, Evgenia, Machulin, Andrey, Litus, Ekaterina

“…A promising approach to the treatment of Alzheimer's disease (AD) is the removal of amyloid-β peptide (Aβ) from the patient's central nervous system by acting…”
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Taxonomic distribution, repeats, and functions of the S1 domain‐containing proteins as members of the OB‐fold family by Deryusheva, Evgeniia I., Machulin, Andrey V., Selivanova, Olga M., Galzitskaya, Oxana V.

“…ABSTRACT Proteins of the nucleic acid‐binding proteins superfamily perform such functions as processing, transport, storage, stretching, translation, and…”
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Bioanalytical System for Determining the Phenol Index Based on Pseudomonas putida BS394(pBS216) Bacteria Immobilized in a Redox-Active Biocompatible Composite Polymer "Bovine Serum Albumin-Ferrocene-Carbon Nanotubes" by Perchikov, Roman N, Provotorova, Daria V, Kharkova, Anna S, Arlyapov, Vyacheslav A, Medvedeva, Anastasia S, Machulin, Andrey V, Filonov, Andrey E, Reshetilov, Anatoly N

“…The possibility of using the microorganisms sp. 7p-81, BS394(pBS216), s67, 5Ap, X5, F5 and DSM 11331 as the basis of a biosensor for the phenol index to assess…”
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Ibuprofen Favors Binding of Amyloid-β Peptide to Its Depot, Serum Albumin by Litus, Ekaterina A, Kazakov, Alexey S, Deryusheva, Evgenia I, Nemashkalova, Ekaterina L, Shevelyova, Marina P, Machulin, Andrey V, Nazipova, Aliya A, Permyakova, Maria E, Uversky, Vladimir N, Permyakov, Sergei E

“…The deposition of amyloid-β peptide (Aβ) in the brain is a critical event in the progression of Alzheimer's disease (AD). This Aβ deposition could be prevented…”
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Acceptor properties of “carbon nanotubes–redox-active polymer based on bovine serum albumin modified with ferrocenecarboxaldehyde” composite for creating a BOD biosensor with Blastobotrys adeninivorans BKM Y-2677 yeast by Sergeevna, Kharkova Anna, Vladimirovna, Provotorova Darya, Valerievich, Machulin Andrey, Alekseevich, Arlyapov Vyacheslav

“…The possibility of using a composite material based on bovine serum albumin (BSA) covalently bonded with ferrocenecarboxaldehyde and containing carbon…”
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S-layer protein 2 of Lactobacillus crispatus 2029, its structural and immunomodulatory characteristics and roles in protective potential of the whole bacteria against foodborne pathogens by Abramov, Vyacheslav M., Kosarev, Igor V., Priputnevich, Tatiana V., Machulin, Andrey V., Khlebnikov, Valentin S., Pchelintsev, Sergey Yu, Vasilenko, Raisa N., Sakulin, Vadim K., Suzina, Natalia E., Chikileva, Irina O., Derysheva, Evgenia I., Melnikov, Vyacheslav G., Nikonov, Ilya N., Samoilenko, Vladimir A., Svetoch, Eduard E., Sukhikh, Gennady T., Uversky, Vladimir N., Karlyshev, Andrey V.

“…We have previously demonstrated that human vaginal Lactobacillus crispatus 2029 (LC2029) strain is highly adhesive to cervicovaginal epithelial cells, exhibits…”
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