Search Results - "Macey, Robert"

Berkeley Madonna Version 10–A simulation package for solving mathematical models by Marcoline, Frank V., Furth, John, Nayak, Smita, Grabe, Michael, Macey, Robert I.

“…Berkeley Madonna is a software program that provides an easy and intuitive environment for graphically building and numerically solving mathematical equations…”
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The demise of a wonder: Evolutionary history and conservation assessments of the Wonder Gecko Teratoscincus keyserlingii (Gekkota, Sphaerodactylidae) in Arabia by Tamar, Karin, Els, Johannes, Kornilios, Panagiotis, Soorae, Pritpal, Tarroso, Pedro, Thanou, Evanthia, Pereira, John, Shah, Junid Nazeer, Elhassan, Esmat Elfaki Mohammed, Aguhob, Jeruel Cabadonga, Badaam, Saoud Faisal, Eltayeb, Mohamed Mustafa, Pusey, Ricardo, Papenfuss, Theodore J, Macey, J Robert, Carranza, Salvador

“…Effective biodiversity conservation planning starts with genetic characterization within and among focal populations, in order to understand the likely impact…”
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Molecular Phylogenetics of Squamata: The Position of Snakes, Amphisbaenians, and Dibamids, and the Root of the Squamate Tree by Townsend, Ted M., Larson, Allan, Louis, Edward, Macey, J. Robert, Sites, Jack

“…Squamate reptiles (snakes, lizards, and amphisbaenians) serve as model systems for evolutionary studies of a variety of morphological and behavioral traits,…”
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Evidence of two deeply divergent co-existing mitochondrial genomes in the Tuatara reveals an extremely complex genomic organization by Macey, J. Robert, Pabinger, Stephan, Barbieri, Charles G., Buring, Ella S., Gonzalez, Vanessa L., Mulcahy, Daniel G., DeMeo, Dustin P., Urban, Lara, Hime, Paul M., Prost, Stefan, Elliott, Aaron N., Gemmell, Neil J.

“…Animal mitochondrial genomic polymorphism occurs as low-level mitochondrial heteroplasmy and deeply divergent co-existing molecules. The latter is rare, known…”
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Morphological Homoplasy, Life History Evolution, and Historical Biogeography of Plethodontid Salamanders Inferred from Complete Mitochondrial Genomes by Mueller, Rachel Lockridge, Macey, J. Robert, Jaekel, Martin, Wake, David B., Boore, Jeffrey L.

“…The evolutionary history of the largest salamander family (Plethodontidae) is characterized by extreme morphological homoplasy. Analysis of the mechanisms…”
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A molecular assessment of phylogenetic relationships and lineage accumulation rates within the family Salamandridae (Amphibia, Caudata) by Weisrock, David W., Papenfuss, Theodore J., Macey, J. Robert, Litvinchuk, Spartak N., Polymeni, Rosa, Ugurtas, Ismail H., Zhao, Ermi, Jowkar, Houman, Larson, Allan

“…We examine phylogenetic relationships among salamanders of the family Salamandridae using approximately 2700 bases of new mtDNA sequence data (the tRNA Leu,…”
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Evaluating Trans-Tethys Migration: An Example Using Acrodont Lizard Phylogenetics by Macey, J. Robert, Schulte, James A., Larson, Allan, Ananjeva, Natalia B., Wang, Yuezhao, Pethiyagoda, Rohan, Rastegar-Pouyani, Nasrullah, Papenfuss, Theodore J.

“…A phylogenetic tree for acrodont lizards (Chamaeleonidae and Agamidae) is established based on 1434 bases (1041 informative) of aligned DNA positions from a…”
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Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences by Macey, J. Robert, Papenfuss, Theodore J., Kuehl, Jennifer V., Fourcade, H. Mathew, Boore, Jeffrey L.

“…Complete mitochondrial genomic sequences are reported from 12 members in the four families of the reptile group Amphisbaenia. Analysis of 11,946 aligned…”
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Plethodontid salamander mitochondrial genomics: A parsimony evaluation of character conflict and implications for historical biogeography by Macey, J. Robert

“…A new parsimony analysis of 27 complete mitochondrial genomic sequences is conducted to investigate the phylogenetic relationships of plethodontid salamanders…”
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Molecular phylogenetic reconstruction of the endemic Asian salamander family Hynobiidae (Amphibia, Caudata) by Weisrock, David W, Macey, J Robert, Matsui, Masafumi, Mulcahy, Daniel G, Papenfuss, Theodore J

“…The salamander family Hynobiidae contains over 50 species and has been the subject of a number of molecular phylogenetic investigations aimed at reconstructing…”
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Socotra Island the forgotten fragment of Gondwana: Unmasking chameleon lizard history with complete mitochondrial genomic data by Robert Macey, J., Kuehl, Jennifer V., Larson, Allan, Robinson, Michael D., Ugurtas, Ismail H., Ananjeva, Natalia B., Rahman, Hafizur, Javed, Hamid Iqbal, Osman, Ridwan Mohamed, Doumma, Ali, Papenfuss, Theodore J.

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Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards by Macey, J R, Larson, A, Ananjeva, N B, Papenfuss, T J

“…A phylogenetic tree for major lineages of iguanian lizards is estimated from 1,488 aligned base positions (858 informative) of newly reported mitochondrial DNA…”
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The tuatara genome reveals ancient features of amniote evolution by Gemmell, Neil J., Rutherford, Kim, Prost, Stefan, Tollis, Marc, Winter, David, Macey, J. Robert, Adelson, David L., Suh, Alexander, Bertozzi, Terry, Grau, José H., Organ, Chris, Gardner, Paul P., Muffato, Matthieu, Patricio, Mateus, Billis, Konstantinos, Martin, Fergal J., Flicek, Paul, Petersen, Bent, Kang, Lin, Michalak, Pawel, Buckley, Thomas R., Wilson, Melissa, Cheng, Yuanyuan, Miller, Hilary, Schott, Ryan K., Jordan, Melissa D., Newcomb, Richard D., Arroyo, José Ignacio, Valenzuela, Nicole, Hore, Tim A., Renart, Jaime, Peona, Valentina, Peart, Claire R., Warmuth, Vera M., Zeng, Lu, Kortschak, R. Daniel, Raison, Joy M., Zapata, Valeria Velásquez, Wu, Zhiqiang, Santesmasses, Didac, Mariotti, Marco, Guigó, Roderic, Rupp, Shawn M., Twort, Victoria G., Dussex, Nicolas, Taylor, Helen, Abe, Hideaki, Bond, Donna M., Paterson, James M., Mulcahy, Daniel G., Gonzalez, Vanessa L., Barbieri, Charles G., DeMeo, Dustin P., Pabinger, Stephan, Van Stijn, Tracey, Clarke, Shannon, Ryder, Oliver, Edwards, Scott V., Salzberg, Steven L., Anderson, Lindsay, Nelson, Nicola, Stone, Clive

“…The tuatara ( Sphenodon punctatus )—the only living member of the reptilian order Rhynchocephalia (Sphenodontia), once widespread across Gondwana 1 , 2 —is an…”
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The complete mitochondrial genome of a gecko and the phylogenetic position of the Middle Eastern Teratoscincus keyserlingii by Macey, J. Robert, Fong, Jonathan J., Kuehl, Jennifer V., Shafiei, Soheila, Ananjeva, Natalia B., Papenfuss, Theodore J., Boore, Jeffrey L.

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Assembly of the eastern North American herpetofauna: new evidence from lizards and frogs by Robert Macey, J, Schulte, James A, Strasburg, Jared L, Brisson, Jennifer A, Larson, Allan, Ananjeva, Natalia B, Wang, Yuezhao, Parham, James F, Papenfuss, Theodore J

“…Darwin first recognized the importance of episodic intercontinental dispersal in the establishment of worldwide biotic diversity. Faunal exchange across the…”
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A genetic perspective on the geographic association of taxa among arid North American lizards of the Sceloporus magister complex (Squamata: Iguanidae: Phrynosomatinae) by Schulte, James A., Macey, J. Robert, Papenfuss, Theodore J.

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Evaluating Trans-Tethys Migration: An Example Using Acrodont Lizard Phylogenetics by Macey, J. Robert, Schulte, James A., Larson, Allan, Ananjeva, Natalia B., Wang, Yuezhao, Pethiyagoda, Rohan, Rastegar-Pouyani, Nasrullah, Papenfuss, Theodore J.

“…A phylogenetic tree for acrodont lizards (Chamaeleonidae and Agamidae) is established based on 1434 bases (1041 informative) of aligned DNA positions from a…”
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Evolution of mitochondrial relationships and biogeography of Palearctic green toads ( Bufo viridis subgroup) with insights in their genomic plasticity by Stöck, Matthias, Moritz, Craig, Hickerson, Michael, Frynta, Daniel, Dujsebayeva, Tatjana, Eremchenko, Valery, Macey, J. Robert, Papenfuss, Theodore J., Wake, David B.

“…Taxa involving three bisexually reproducing ploidy levels make green toads a unique amphibian system. We put a cytogenetic dataset from Central Asia in a…”
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Phylogenetic relationships in the iguanid lizard genus Liolaemus: multiple origins of viviparous reproduction and evidence for recurring Andean vicariance and dispersal by SCHULTE II, JAMES A, MACEY, ROBERT J, ESPINOZA, ROBERT E, LARSON, ALLAN

“…Phylogenetic relationships within the iguanid lizard genus Liolaemus are investigated using 1710 aligned base positions (785 phylogenetically informative) of…”
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Vicariance and dispersal form a ring distribution in nightsnakes around the Gulf of California by Mulcahy, Daniel G., Macey, J. Robert

“…Plate tectonics can have profound effects on organismal distribution and is often the driving force in speciation. Through geologic processes, the Baja…”
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