Search Results - "Ma, Dongna"
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Genomic evidence of prevalent hybridization throughout the evolutionary history of the fig-wasp pollination mutualism
Published in Nature communications (02-02-2021)“…Ficus (figs) and their agaonid wasp pollinators present an ecologically important mutualism that also provides a rich comparative system for studying…”
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2
Genome-Wide Identification, Characterization and Function Analysis of Lineage-Specific Genes in the Tea Plant Camellia sinensis
Published in Frontiers in genetics (10-11-2021)“…Genes that have no homologous sequences with other species are called lineage-specific genes (LSGs), are common in living organisms, and have an important role…”
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3
Microbial community succession patterns and drivers of Luxiang-flavor Jiupei during long fermentation
Published in Frontiers in microbiology (10-02-2023)“…Luxiang-flavor Baijiu is the mainstream of Baijiu production and consumption in China, and the microbial composition has a great influence on the flavor and…”
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4
Segmental duplications: evolution and impact among the current Lepidoptera genomes
Published in BMC evolutionary biology (06-07-2017)“…Structural variation among genomes is now viewed to be as important as single nucleoid polymorphisms in influencing the phenotype and evolution of a species…”
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Identification, characterization and expression analysis of lineage-specific genes within mangrove species Aegiceras corniculatum
Published in Molecular genetics and genomics : MGG (01-11-2021)“…Lineage-specific genes (LSGs) are the genes that have no recognizable homology to any sequences in other species, which are important drivers for the…”
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6
Aging-based molecular classification and score system in ccRCC uncovers distinct prognosis, tumor immunogenicity, and treatment sensitivity
Published in Frontiers in immunology (11-08-2022)“…Objective Aging is a complex biological process and a major risk factor for cancer development. This study was conducted to develop a novel aging-based…”
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Identification, Characterization and Function of Orphan Genes Among the Current Cucurbitaceae Genomes
Published in Frontiers in plant science (04-05-2022)“…Orphan genes (OGs) that are missing identifiable homologs in other lineages may potentially make contributions to a variety of biological functions. The…”
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High-Quality Genome of the Medicinal Plant Strobilanthes cusia Provides Insights Into the Biosynthesis of Indole Alkaloids
Published in Frontiers in plant science (30-09-2021)“…Strobilanthes cusia (Nees) Kuntze is an important plant used to process the traditional Chinese herbal medicines “Qingdai” and “Nanbanlangen”. The key active…”
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Illumina sequencing of complete chloroplast genome of Avicennia marina, a pioneer mangrove species
Published in Mitochondrial DNA. Part B. Resources (02-07-2020)“…Mangrove tree Avicenna marina has great ecological significance in maintaining coastal ecosystem, but its unique potential for gene functions and genetic…”
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Chromosome‐level reference genome assembly provides insights into aroma biosynthesis in passion fruit (Passiflora edulis)
Published in Molecular ecology resources (01-04-2021)“…Passion fruit, native to tropical America, is an agriculturally, economically and ornamentally important fruit plant that is well known for its acid pulp, rich…”
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Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis
Published in Nature genetics (01-08-2021)“…Tea is an important global beverage crop and is largely clonally propagated. Despite previous studies on the species, its genetic and evolutionary history…”
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12
Multicopper Oxidase from Lactobacillus hilgardii: Mechanism of Degradation of Tyramine and Phenylethylamine in Fermented Food
Published in Journal of agricultural and food chemistry (07-08-2024)“…Elevated levels of biogenic amines (BAs) in fermented food can have negative effects on both the flavor and health. Mining enzymes that degrade BAs is an…”
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13
An Orphan Gene Enhances Male Reproductive Success in Plutella xylostella
Published in Molecular biology and evolution (11-07-2024)“…Abstract Plutella xylostella exhibits exceptional reproduction ability, yet the genetic basis underlying the high reproductive capacity remains unknown. Here,…”
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14
Chloroplast genome analysis of three Acanthus species reveal the adaptation of mangrove to intertidal habitats
Published in Gene (15-07-2023)“…Acanthus is a distinctive genus that covers three species with different ecological niches including Acanthus mollis (arid terrestrial), Acanthus leucostachyus…”
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DSNetax: a deep learning species annotation method based on a deep-shallow parallel framework
Published in Briefings in bioinformatics (27-03-2024)“…Abstract Microbial community analysis is an important field to study the composition and function of microbial communities. Microbial species annotation is…”
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RNA-seq analyses of Marine Medaka (Oryzias melastigma) reveals salinity responsive transcriptomes in the gills and livers
Published in Aquatic toxicology (01-11-2021)“…•Salinity induced adaptive mechanisms and histochemical responses were evaluated in O. melastigma.•1664 genes exhibited expression responses under extreme…”
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The genome of a mangrove plant, Avicennia marina, provides insights into adaptation to coastal intertidal habitats
Published in Planta (01-07-2022)“…Main conclusion Whole-genome duplication, gene family and lineage-specific genes analysis based on high-quality genome reveal the adaptation mechanisms of…”
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Comparative transcriptome analysis on the mangrove Acanthus ilicifolius and its two terrestrial relatives provides insights into adaptation to intertidal habitats
Published in Gene (25-09-2022)“…•A. ilicifolius migrated to the intertidal habitats at 16.89 Mya.•Unique unigenes drives adaptation of A. ilicifolius to environment.•Positive selection of…”
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PlantPhoneDB: A manually curated pan‐plant database of ligand‐receptor pairs infers cell–cell communication
Published in Plant biotechnology journal (01-11-2022)“…Summary Ligand‐receptor pairs play important roles in cell–cell communication for multicellular organisms in response to environmental cues. Recently, the…”
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Purification, characterisation and visualisation of soybean protein hydrolysis by aspergillopepsin I from mangrove Aspergillus tubingensis
Published in International biodeterioration & biodegradation (01-06-2024)“…In order to obtain marine-derived enzymes suitable for protein hydrolysis in acid brewing system, seven species of fungi were obtained from mangrove soil. One…”
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