Search Results - "MANI, R"

Non-linear adaptive three-dimensional imaging with interferenceless coded aperture correlation holography (I-COACH) by Rai, Mani R, Vijayakumar, A, Rosen, Joseph

“…Interferenceless coded aperture correlation holography (I-COACH) is an incoherent digital holography technique for imaging 3D objects without two-wave…”
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Coastal vulnerability assessment of Puducherry coast, India, using the analytical hierarchical process by Mani Murali, R, Ankita, M, Amrita, S, Vethamony, P

“…As a consequence of change in global climate, an increased frequency of natural hazards such as storm surges, tsunamis and cyclones, is predicted to have…”
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Cancer proteogenomics: current impact and future prospects by Mani, D. R., Krug, Karsten, Zhang, Bing, Satpathy, Shankha, Clauser, Karl R., Ding, Li, Ellis, Matthew, Gillette, Michael A., Carr, Steven A.

“…Genomic analyses in cancer have been enormously impactful, leading to the identification of driver mutations and development of targeted therapies. But the…”
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Enhanced Antifungal Activity of Pure and Iron-Doped ZnO Nanoparticles Prepared in the Absence of Reducing Agents by Ferin Fathima, A., Jothi Mani, R., Sakthipandi, K., Manimala, K., Hossain, Aslam

“…Pure and iron (Fe)-doped ZnO nanoparticles were synthesized using polyethylene glycol in the absence of reducing agents such as NaOH and ammonia. From XRD…”
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Repression of E-cadherin by the polycomb group protein EZH2 in cancer by Cao, Q, Yu, J, Dhanasekaran, S M, Kim, J H, Mani, R-S, Tomlins, S A, Mehra, R, Laxman, B, Cao, X, Kleer, C G, Varambally, S, Chinnaiyan, A M

“…Enhancer of zeste homolog 2 (EZH2) is a critical component of the polycomb-repressive complex 2 (PRC2), which is involved in gene silencing and histone H3…”
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Cyclone Hudhud-eddy induced phytoplankton bloom in the northern Bay of Bengal using a coupled model by Vidya, P.J., Balaji, M., Mani Murali, R

“…•Stratification inhibits eddy-driven upwelling in the northern Bay of Bengal.•Eddy-cyclone interaction reduces the water column stability and initiates…”
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The necrosome promotes pancreatic oncogenesis via CXCL1 and Mincle-induced immune suppression by Seifert, Lena, Werba, Gregor, Tiwari, Shaun, Giao Ly, Nancy Ngoc, Alothman, Sara, Alqunaibit, Dalia, Avanzi, Antonina, Barilla, Rocky, Daley, Donnele, Greco, Stephanie H., Torres-Hernandez, Alejandro, Pergamo, Matthew, Ochi, Atsuo, Zambirinis, Constantinos P., Pansari, Mridul, Rendon, Mauricio, Tippens, Daniel, Hundeyin, Mautin, Mani, Vishnu R., Hajdu, Cristina, Engle, Dannielle, Miller, George

“…A study of pancreatic ductal adenocarcinoma shows that cancer cell proliferation is associated with increased expression of proteins that control programmed…”
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Distribution and dynamics of mangrove forests of South Asia by Giri, Chandra, Long, Jordan, Abbas, Sawaid, Murali, R.Mani, Qamer, Faisal M., Pengra, Bruce, Thau, David

“…Mangrove forests in South Asia occur along the tidal sea edge of Bangladesh, India, Pakistan, and Sri Lanka. These forests provide important ecosystem goods…”
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Integrated proteomic analysis of post-translational modifications by serial enrichment by Mertins, Philipp, Qiao, Jana W, Patel, Jinal, Udeshi, Namrata D, Clauser, Karl R, Mani, D R, Burgess, Michael W, Gillette, Michael A, Jaffe, Jacob D, Carr, Steven A

“…A mass spectrometry–based method using serial enrichments of different post-translational modifications (SEPTM) enables high-coverage proteomic analysis of…”
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Size-dependent giant-magnetoresistance in millimeter scale GaAs/AlGaAs 2D electron devices by Mani, R. G., Kriisa, A., Wegscheider, W.

“…Large changes in the electrical resistance induced by the application of a small magnetic field are potentially useful for device-applications. Such Giant…”
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Prediction of high-responding peptides for targeted protein assays by mass spectrometry by Mesirov, Jill P, Carr, Steven A, Fusaro, Vincent A, Mani, D R

“…Development of sensitive mass spectrometry–based assays for complex biofluids depends on the ability to identify signature peptides that produce the strongest…”
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Dectin 1 activation on macrophages by galectin 9 promotes pancreatic carcinoma and peritumoral immune tolerance by Daley, Donnele, Mani, Vishnu R, Mohan, Navyatha, Akkad, Neha, Ochi, Atsuo, Heindel, Daniel W, Lee, Ki Buom, Zambirinis, Constantinos P, Pandian, Gautam SD Balasubramania, Savadkar, Shivraj, Torres-Hernandez, Alejandro, Nayak, Shruti, Wang, Ding, Hundeyin, Mautin, Diskin, Brian, Aykut, Berk, Werba, Gregor, Barilla, Rocky M, Rodriguez, Robert, Chang, Steven, Gardner, Lawrence, Mahal, Lara K, Ueberheide, Beatrix, Miller, George

“…Activation of dectin-1-dependent signaling in macrophages through ligation by galectin 9 promotes an immunosuppressive, protumorigenic microenvironment in…”
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Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry by Mertins, Philipp, Tang, Lauren C., Krug, Karsten, Clark, David J., Gritsenko, Marina A., Chen, Lijun, Clauser, Karl R., Clauss, Therese R., Shah, Punit, Gillette, Michael A., Petyuk, Vladislav A., Thomas, Stefani N., Mani, D. R., Mundt, Filip, Moore, Ronald J., Hu, Yingwei, Zhao, Rui, Schnaubelt, Michael, Keshishian, Hasmik, Monroe, Matthew E., Zhang, Zhen, Udeshi, Namrata D., Mani, Deepak, Davies, Sherri R., Townsend, R. Reid, Chan, Daniel W., Smith, Richard D., Zhang, Hui, Liu, Tao, Carr, Steven A.

“…Here we present an optimized workflow for global proteome and phosphoproteome analysis of tissues or cell lines that uses isobaric tags (TMT (tandem mass…”
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An Assessment of Software Solutions for the Analysis of Mass Spectrometry Based Quantitative Proteomics Data by Mueller, Lukas N, Brusniak, Mi-Youn, Mani, D. R, Aebersold, Ruedi

“…Over the past decade, a series of experimental strategies for mass spectrometry based quantitative proteomics and corresponding computational methodology for…”
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Application of physiological network mapping in the prediction of survival in critically ill patients with acute liver failure by Oyelade, Tope, Moore, Kevin P., Mani, Ali R.

“…Reduced functional connectivity of physiological systems is associated with poor prognosis in critically ill patients. However, physiological network analysis…”
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Proteogenomics connects somatic mutations to signalling in breast cancer by Mertins, Philipp, Mani, D. R., Ruggles, Kelly V., Gillette, Michael A., Clauser, Karl R., Wang, Pei, Wang, Xianlong, Qiao, Jana W., Cao, Song, Petralia, Francesca, Kawaler, Emily, Mundt, Filip, Krug, Karsten, Tu, Zhidong, Lei, Jonathan T., Gatza, Michael L., Wilkerson, Matthew, Perou, Charles M., Yellapantula, Venkata, Huang, Kuan-lin, Lin, Chenwei, McLellan, Michael D., Yan, Ping, Davies, Sherri R., Townsend, R. Reid, Skates, Steven J., Wang, Jing, Zhang, Bing, Kinsinger, Christopher R., Mesri, Mehdi, Rodriguez, Henry, Ding, Li, Paulovich, Amanda G., Fenyö, David, Ellis, Matthew J., Carr, Steven A.

“…Somatic mutations have been extensively characterized in breast cancer, but the effects of these genetic alterations on the proteomic landscape remain poorly…”
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Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications by Ctortecka, Claudia, Clark, Natalie M., Boyle, Brian W., Seth, Anjali, Mani, D. R., Udeshi, Namrata D., Carr, Steven A.

“…The recent technological and computational advances in mass spectrometry-based single-cell proteomics have pushed the boundaries of sensitivity and throughput…”
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Automated Detection of Inaccurate and Imprecise Transitions in Peptide Quantification by Multiple Reaction Monitoring Mass Spectrometry by Abbatiello, Susan E, Mani, D. R, Keshishian, Hasmik, Carr, Steven A

“…Multiple reaction monitoring mass spectrometry (MRM-MS) of peptides with stable isotope-labeled internal standards (SISs) is increasingly being used to develop…”
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Harnessing full-text publications for deep insights into C. elegans and Drosophila biomaps by Arulprakasam, Karthick Raja, Toh, Janelle Wing Shan, Foo, Herman, Kumar, Mani R, Kutevska, An-Nikol, Davey, Emilia Emmanuelle, Mutwil, Marek, Thibault, Guillaume

“…In the rapidly expanding domain of scientific research, tracking and synthesizing information from the rapidly increasing volume of publications pose…”
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NLRP3 signaling drives macrophage-induced adaptive immune suppression in pancreatic carcinoma by Daley, Donnele, Mani, Vishnu R, Mohan, Navyatha, Akkad, Neha, Pandian, Gautam S D Balasubramania, Savadkar, Shivraj, Lee, Ki Buom, Torres-Hernandez, Alejandro, Aykut, Berk, Diskin, Brian, Wang, Wei, Farooq, Mohammad S, Mahmud, Arif I, Werba, Gregor, Morales, Eduardo J, Lall, Sarah, Wadowski, Benjamin J, Rubin, Amanda G, Berman, Matthew E, Narayanan, Rajkishen, Hundeyin, Mautin, Miller, George

“…The tumor microenvironment (TME) in pancreatic ductal adenocarcinoma (PDA) is characterized by immune tolerance, which enables disease to progress unabated by…”
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