Search Results - "Luo, Ruiyan"
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Ensemble bootstrap methodology for forecasting dynamic growth processes using differential equations: application to epidemic outbreaks
Published in BMC medical research methodology (14-02-2021)“…Ensemble modeling aims to boost the forecasting performance by systematically integrating the predictive accuracy across individual models. Here we introduce a…”
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Short-term Forecasts of the COVID-19 Epidemic in Guangdong and Zhejiang, China: February 13-23, 2020
Published in Journal of clinical medicine (22-02-2020)“…The ongoing COVID-19 epidemic continues to spread within and outside of China, despite several social distancing measures implemented by the Chinese…”
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Transmission dynamics and control of COVID-19 in Chile, March-October, 2020
Published in PLoS neglected tropical diseases (22-01-2021)“…Since the detection of the first case of COVID-19 in Chile on March 3rd, 2020, a total of 513,188 cases, including ~14,302 deaths have been reported in Chile…”
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Real-time forecasting the trajectory of monkeypox outbreaks at the national and global levels, July-October 2022
Published in BMC medicine (16-01-2023)“…Beginning May 7, 2022, multiple nations reported an unprecedented surge in monkeypox cases. Unlike past outbreaks, differences in affected populations,…”
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Geospatial Variability in Excess Death Rates during the COVID-19 Pandemic in Mexico: Examining Socio Demographic, Climate and Population Health Characteristics
Published in International journal of infectious diseases (01-12-2021)“…This study examined how socio-demographic, climate and population health characteristics shaped the geospatial variability in excess mortality patterns during…”
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Evaluating the forecasting performance of ensemble sub-epidemic frameworks and other time series models for the 2022-2023 mpox epidemic
Published in Royal Society open science (01-07-2024)“…During the 2022-2023 unprecedented mpox epidemic, near real-time short-term forecasts of the epidemic's trajectory were essential in intervention…”
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GrowthPredict: A toolbox and tutorial-based primer for fitting and forecasting growth trajectories using phenomenological growth models
Published in Scientific reports (18-01-2024)“…Simple dynamic modeling tools can help generate real-time short-term forecasts with quantified uncertainty of the trajectory of diverse growth processes…”
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SpatialWavePredict: a tutorial-based primer and toolbox for forecasting growth trajectories using the ensemble spatial wave sub-epidemic modeling framework
Published in BMC medical research methodology (07-06-2024)“…Dynamical mathematical models defined by a system of differential equations are typically not easily accessible to non-experts. However, forecasts based on…”
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Blood transcriptomics and metabolomics for personalized medicine
Published in Computational and structural biotechnology journal (01-01-2016)“…Molecular analysis of blood samples is pivotal to clinical diagnosis and has been intensively investigated since the rise of systems biology. Recent…”
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Evaluating latent tuberculosis infection diagnostics using latent class analysis
Published in Thorax (01-11-2018)“…Lack of a gold standard for latent TB infection has precluded direct measurement of test characteristics of the tuberculin skin test and interferon-γ release…”
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An ensemble n-sub-epidemic modeling framework for short-term forecasting epidemic trajectories: Application to the COVID-19 pandemic in the USA
Published in PLoS computational biology (06-10-2022)“…We analyze an ensemble of n -sub-epidemic modeling for forecasting the trajectory of epidemics and pandemics. These ensemble modeling approaches, and models…”
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Comparative assessment of parameter estimation methods in the presence of overdispersion: a simulation study
Published in Mathematical biosciences and engineering : MBE (01-01-2019)“…The Poisson distribution is commonly assumed as the error structure for count data; however, empirical data may exhibit greater variability than expected based…”
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Investigating COVID-19 transmission and mortality differences between indigenous and non-indigenous populations in Mexico
Published in International journal of infectious diseases (01-09-2022)“…•Indigenous groups had a 68% higher COVID-19 mortality rate than the non-indigenous groups.•Of 32 federal entities, 23 had a higher mortality rate among the…”
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An investigation of spatial-temporal patterns and predictions of the coronavirus 2019 pandemic in Colombia, 2020-2021
Published in PLoS neglected tropical diseases (01-03-2022)“…Colombia announced the first case of severe acute respiratory syndrome coronavirus 2 on March 6, 2020. Since then, the country has reported a total of…”
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Investigating oral health among individuals with depression: NHANES 2015–2016
Published in The Saudi dental journal (01-03-2022)“…Depression is highly prevalent across populations, yet studies on its contribution to oral health are lacking. Therefore, our goal is to examine the…”
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Transmission dynamics and forecasts of the COVID-19 pandemic in Mexico, March-December 2020
Published in PloS one (21-07-2021)“…Mexico has experienced one of the highest COVID-19 mortality rates in the world. A delayed implementation of social distancing interventions in late March 2020…”
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Public Housing Relocations and Partnership Dynamics in Areas With High Prevalences of Sexually Transmitted Infections
Published in Sexually transmitted diseases (01-04-2016)“…BACKGROUNDWe investigated the implications of one structural intervention—public housing relocations—for partnership dynamics among individuals living areas…”
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SubEpiPredict: A tutorial-based primer and toolbox for fitting and forecasting growth trajectories using the ensemble n-sub-epidemic modeling framework
Published in Infectious disease modelling (01-06-2024)“…An ensemble n-sub-epidemic modeling framework that integrates sub-epidemics to capture complex temporal dynamics has demonstrated powerful forecasting…”
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Transmission Dynamics and Short-Term Forecasts of COVID-19: Nepal 2020/2021
Published in Epidemiolgia (Basel, Switzerland) (16-12-2021)“…Nepal was hard hit by a second wave of COVID-19 from April-May 2021. We investigated the transmission dynamics of COVID-19 at the national and provincial…”
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Stillbirth Risk during the 1918 Influenza Pandemic in Arizona, USA
Published in Epidemiolgia (Basel, Switzerland) (11-11-2020)“…The 1918 influenza pandemic, the deadliest pandemic on record, affected approximately 1/3rd of the population worldwide. The impact of this pandemic on…”
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