Search Results - "Lukasiak, Piotr"
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Ab Initio Study of Glycine Formation in the Condensed Phase: Carbon Monoxide, Formaldimine, and Water Are Enough
Published in The Astrophysical journal (01-10-2023)“…Glycine is considered to be crucial in the formation of proteins and prebiotic substances. Nevertheless, the mechanism of spontaneous glycine formation under…”
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Effects of Fructose and Oligofructose Addition on Milk Fermentation Using Novel Lactobacillus Cultures to Obtain High-Quality Yogurt-like Products
Published in Molecules (Basel, Switzerland) (22-09-2021)“…The incorporation of prebiotics in fermented milk products is one of the best ways to promote health benefits while improving their sensory characteristics at…”
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3
Automated 3D structure composition for large RNAs
Published in Nucleic acids research (01-08-2012)“…Understanding the numerous functions that RNAs play in living cells depends critically on knowledge of their three-dimensional structure. Due to the…”
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A Survey on the Application of Machine Learning in Turbulent Flow Simulations
Published in Energies (Basel) (01-02-2023)“…As early as at the end of the 19th century, shortly after mathematical rules describing fluid flow—such as the Navier–Stokes equations—were developed, the idea…”
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5
Analysis of the Impact of Reformulation of the Recipe Composition on the Quality of Instant Noodles
Published in Applied sciences (01-10-2024)“…This study aimed to evaluate how adding whey protein and transglutaminase impacts the quality of fried instant noodles. This research focused on analyzing…”
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The correctness of large scale analysis of genomic data
Published in Foundations of computing and decision sciences (01-12-2021)“…Implementing a large genomic project is a demanding task, also from the computer science point of view. Besides collecting many genome samples and sequencing…”
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Incorporation of Chokeberry Pomace into Baked Products: Influence on the Quality of the Dough and the Muffins
Published in Applied sciences (01-11-2024)“…The use of pomace in bakery products opens up new possibilities for the management of waste products from the fruit industry. Such activities are integral to…”
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The Influence of Rice Protein, Hemp Protein and Transglutaminase Addition on the Quality of Instant Fried Noodles
Published in Applied sciences (01-10-2021)“…The goal of this study was to determine the effect of rice and hemp protein addition together with transglutaminase on the quality and fat content of fried…”
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The Influence of Chestnut Flour on the Quality of Gluten-Free Bread
Published in Applied sciences (01-08-2022)“…Gluten-free bread is the basis of an elimination diet in the case of many glucose-related diseases. The quality of this bread differs significantly from…”
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Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA
Published in Computational biology and chemistry (01-02-2017)“…[Display omitted] •Plant Dicer-like proteins have Platform domain similar to Giardia and human Dicers.•Assembling of the AtDCL-dsRNA complex was performed…”
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Building the library of RNA 3D nucleotide conformations using the clustering approach
Published in International journal of applied mathematics and computer science (01-09-2015)“…An increasing number of known RNA 3D structures contributes to the recognition of various RNA families and identification of their features. These tasks are…”
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GeVaDSs - decision support system for novel Genetic Vaccine development process
Published in BMC bioinformatics (10-05-2012)“…The lack of a uniform way for qualitative and quantitative evaluation of vaccine candidates under development led us to set up a standardized scheme for…”
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Some operations research methods for analyzing protein sequences and structures
Published in Annals of operations research (01-03-2010)“…The operations research is probably one of the most successful field of applied mathematics used in economics, physics, chemistry, almost everywhere where one…”
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Application of tabu search strategy for finding low energy structure of protein
Published in Artificial intelligence in medicine (01-09-2005)“…Understanding protein functionality would mean understanding the basics of life. This functionality follows a three-dimensional structure of proteins…”
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15
Some operations research methods for analyzing protein sequences and structures
Published in 4OR (01-06-2006)“…Operations Research is probably one of the most successful fields of applied mathematics used in Economics, Physics, Chemistry, almost everywhere one has to…”
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RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools
Published in Nucleic acids research (24-01-2020)“…Abstract Significant improvements have been made in the efficiency and accuracy of RNA 3D structure prediction methods during the succeeding challenges of…”
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SphereGrinder - reference structure-based tool for quality assessment of protein structural models
Published in 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (01-11-2015)“…3D protein structure prediction is of significant interest in the biological research community. Nowadays, one can find many methodologies that can lead to…”
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Conference Proceeding -
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Virxicon: a lexicon of viral sequences
Published in Bioinformatics (Oxford, England) (01-04-2021)“…Abstract Motivation Viruses are the most abundant biological entities and constitute a large reservoir of genetic diversity. In recent years, knowledge about…”
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RNApdbee--a webserver to derive secondary structures from pdb files of knotted and unknotted RNAs
Published in Nucleic acids research (01-07-2014)“…In RNA structural biology and bioinformatics an access to correct RNA secondary structure and its proper representation is of crucial importance. This is true…”
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Structural alignment of protein descriptors - a combinatorial model
Published in BMC bioinformatics (17-09-2016)“…Structural alignment of proteins is one of the most challenging problems in molecular biology. The tertiary structure of a protein strictly correlates with its…”
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