Search Results - "Luis Delaye"
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Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins
Published in BMC genomics (10-06-2019)“…Reliable indicators for the onset of flowering are not available for most perennial monocarpic species, representing a drawback for crops such as bamboo, agave…”
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Endophytes versus biotrophic and necrotrophic pathogens—are fungal lifestyles evolutionarily stable traits?
Published in Fungal diversity (01-05-2013)“…Endophytes infect living plant tissues without causing symptoms of disease. Indeed, many of them contribute to the resistance phenotype of their host. However,…”
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Genomic history of the origin and domestication of common bean unveils its closest sister species
Published in Genome Biology (29-03-2017)“…Modern civilization depends on only a few plant species for its nourishment. These crops were derived via several thousands of years of human selection that…”
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Increased rates of protein evolution and asymmetric deceleration after the whole-genome duplication in yeasts
Published in BMC evolutionary biology (06-02-2017)“…Whole-genome duplication (WGD) events have shaped the genomes of eukaryotic organisms. Relaxed selection after duplication along with inherent functional…”
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Chromosome-Level Genome Assembly of the American Cranberry ( Vaccinium macrocarpon Ait.) and Its Wild Relative Vaccinium microcarpum
Published in Frontiers in plant science (10-02-2021)“…The American cranberry ( Ait.) is an iconic North American fruit crop of great cultural and economic importance. Cranberry can be considered a fruit crop model…”
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Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomes
Published in BMC research notes (01-02-2012)“…The sizes of proteins are relevant to their biochemical structure and for their biological function. The statistical distribution of protein lengths across a…”
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RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition
Published in PloS one (29-07-2021)“…Strict endosymbiont bacteria present high degree genome reduction, retain smaller proteins, and in some instances, lack complete functional domains compared to…”
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Plant Proteins Are Smaller Because They Are Encoded by Fewer Exons than Animal Proteins
Published in Genomics, proteomics & bioinformatics (01-12-2016)“…Protein size is an important biochemical feature since longer proteins can harbor more domains and therefore can display more biological functionalities than…”
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Global transcriptome analysis of the scorpion Centruroides noxius: new toxin families and evolutionary insights from an ancestral scorpion species
Published in PloS one (17-08-2012)“…Scorpion venoms have been studied for decades, leading to the identification of hundreds of different toxins with medical and pharmacological implications…”
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How Really Ancient Is Paulinella Chromatophora?
Published in PLoS currents (15-03-2016)“…The ancestor of Paulinella chromatophora established a symbiotic relationship with cyanobacteria related to the Prochloroccocus/Synechococcus clade. This event…”
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Driven progressive evolution of genome sequence complexity in Cyanobacteria
Published in Scientific reports (04-11-2020)“…Progressive evolution, or the tendency towards increasing complexity, is a controversial issue in biology, which resolution entails a proper measurement of…”
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The Very Early Stages of Biological Evolution and the Nature of the Last Common Ancestor of the Three Major Cell Domains
Published in Annual review of ecology, evolution, and systematics (01-01-2007)“…Quantitative estimates of the gene complement of the last common ancestor of all extant organisms, that is, the cenancestor, may be hindered by ancient…”
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Emergence as an outbreak of the HIV-1 CRF19_cpx variant in treatment-naïve patients in southern Spain
Published in PloS one (01-01-2018)“…CRF19_cpx is a complex circulating recombination form (CRF) of HIV-1. We describe the characteristics of an outbreak of the CRF19_cpx variant among…”
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An Upgrade on the Surveillance System of SARS-CoV-2: Deployment of New Methods for Genetic Inspection
Published in International journal of molecular sciences (15-03-2022)“…SARS-CoV-2 variants surveillance is a worldwide task that has been approached with techniques such as Next Generation Sequencing (NGS); however, this…”
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The Unfinished Reconstructed Nature of the Last Universal Common Ancestor
Published in Journal of molecular evolution (01-10-2024)“…The ultimate consequence of Darwin’s theory of common descent implies that all life on earth descends ultimately from a common ancestor. Biochemistry and…”
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Natural selection drove metabolic specialization of the chromatophore in Paulinella chromatophora
Published in BMC evolutionary biology (14-04-2017)“…Genome degradation of host-restricted mutualistic endosymbionts has been attributed to inactivating mutations and genetic drift while genes coding for…”
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Probable presence of an ubiquitous cryptic mitochondrial gene on the antisense strand of the cytochrome oxidase I gene
Published in Biology direct (24-10-2011)“…Mitochondria mediate most of the energy production that occurs in the majority of eukaryotic organisms. These subcellular organelles contain a genome that…”
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The origin of a novel gene through overprinting in Escherichia coli
Published in BMC evolutionary biology (28-01-2008)“…Overlapped genes originate by a) loss of a stop codon among contiguous genes coded in different frames; b) shift to an upstream initiation codon of one of the…”
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Metabolic analysis of Chlorobium chlorochromatii CaD3 reveals clues of the symbiosis in ‘Chlorochromatium aggregatum’
Published in The ISME Journal (01-05-2014)“…A symbiotic association occurs in ‘ Chlorochromatium aggregatum ’, a phototrophic consortium integrated by two species of phylogenetically distant bacteria…”
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Twisting development, the birth of a potential new gene
Published in iScience (22-12-2022)“…Evolution has long been considered to be a conservative process in which new genes arise from pre-existing genes through gene duplication, domain shuffling,…”
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