Search Results - "Love, Tanzy M. T."
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Correction: Multiple imputation and direct estimation for qPCR data with non-detects
Published in BMC bioinformatics (07-02-2024)Get full text
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Multiple imputation and direct estimation for qPCR data with non-detects
Published in BMC bioinformatics (26-11-2020)“…Quantitative real-time PCR (qPCR) is one of the most widely used methods to measure gene expression. An important aspect of qPCR data that has been largely…”
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New insights into the responder/nonresponder divide in rectal cancer: Damage-induced Type I IFNs dictate treatment efficacy and can be targeted to enhance radiotherapy
Published in Cell death & disease (26-07-2023)“…Rectal cancer ranks as the second leading cause of cancer-related deaths. Neoadjuvant therapy for rectal cancer patients often results in individuals that…”
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Mathematical Modeling of Ultradeep Sequencing Data Reveals that Acute CD8+ T-Lymphocyte Responses Exert Strong Selective Pressure in Simian Immunodeficiency Virus-Infected Macaques but Still Fail To Clear Founder Epitope Sequences
Published in Journal of Virology (01-06-2010)“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Interpretability Versus Accuracy: A Comparison of Machine Learning Models Built Using Different Algorithms, Performance Measures, and Features to Predict E. coli Levels in Agricultural Water
Published in Frontiers in artificial intelligence (14-05-2021)“…Since is considered a fecal indicator in surface water, government water quality standards and industry guidance often rely on monitoring to identify when…”
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Predictive Models May Complement or Provide an Alternative to Existing Strategies for Assessing the Enteric Pathogen Contamination Status of Northeastern Streams Used to Provide Water for Produce Production
Published in Frontiers in sustainable food systems (01-10-2020)“…While the Food Safety Modernization Act established standards for the use of surface water for produce production, water quality is known to vary over space…”
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Precision detection of recent HIV infections using high-throughput genomic incidence assay
Published in Microbiology spectrum (01-10-2023)“…ABSTRACT HIV incidence is a key measure for tracking disease spread and identifying populations and geographic regions where new infections are most…”
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The HIV Genomic Incidence Assay Meets False Recency Rate and Mean Duration of Recency Infection Performance Standards
Published in Scientific reports (07-08-2017)“…HIV incidence is a primary metric for epidemic surveillance and prevention efficacy assessment. HIV incidence assay performance is evaluated via false recency…”
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Designing a genome-based HIV incidence assay with high sensitivity and specificity
Published in AIDS (London) (23-10-2011)“…Considerable inaccuracy in estimates of HIV incidence has been a serious obstacle to the development of efficient HIV/AIDS prevention and interventions…”
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Total-Body Irradiation Exacerbates Dissemination of Cutaneous Candida Albicans Infection
Published in Radiation research (01-11-2016)“…Exposure to radiation, particularly a large or total-body dose, weakens the immune system through loss of bone marrow precursor cells, as well as diminished…”
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Molecular clock of HIV-1 envelope genes under early immune selection
Published in Retrovirology (01-06-2016)“…The molecular clock hypothesis that genes or proteins evolve at a constant rate is a key tool to reveal phylogenetic relationships among species. Using the…”
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Sustained reduction of central line–associated bloodstream infections outside the intensive care unit with a multimodal intervention focusing on central line maintenance
Published in American journal of infection control (01-07-2014)“…Background Central venous catheter use is common outside the intensive care units (ICUs), but prevention in this setting is not well studied. We initiated…”
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Bayesian Models for Multiple Outcomes in Domains With Application to the Seychelles Child Development Study
Published in Journal of the American Statistical Association (2014)“…The Seychelles Child Development Study (SCDS) examines the effects of prenatal exposure to methylmercury on the functioning of the central nervous system. The…”
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Methodological differences between studies confound one-size-fits-all approaches to managing surface waterways for food and water safety
Published in Applied and environmental microbiology (21-02-2024)“…The microbial ecology of water is already complex, without the added complications of methodological differences between studies. This study highlights the…”
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Structural Equation Models Suggest That On-Farm Noncrop Vegetation Removal Is Not Associated with Improved Food Safety Outcomes but Is Linked to Impaired Water Quality
Published in Applied and environmental microbiology (13-12-2022)“…While growers have reported pressures to minimize wildlife intrusion into produce fields through noncrop vegetation (NCV) removal, NCV provides key ecosystem…”
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Scale of analysis drives the observed ratio of spatial to non-spatial variance in microbial water quality: insights from two decades of citizen science data
Published in Journal of applied microbiology (04-10-2023)“…While fecal indicator bacteria (FIB) testing is used to monitor surface water for potential health hazards, observed variation in FIB levels may depend on the…”
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HIITE: HIV-1 incidence and infection time estimator
Published in Bioinformatics (15-06-2018)“…Abstract Motivation Around 2.1 million new HIV-1 infections were reported in 2015, alerting that the HIV-1 epidemic remains a significant global health…”
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Radiation Therapy Exacerbates Tumor-Promoting Innervation and Nerve Signaling in Rectal Cancer
Published in International journal of radiation oncology, biology, physics (01-03-2023)“…Many solid tumors present with perineural invasion (PNI), and innervation correlates with worsened prognosis. The effects that commonly administered therapies…”
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Gut microbiome in people living with HIV is associated with impaired thiamine and folate syntheses
Published in Microbial pathogenesis (01-11-2021)“…People living with HIV have a high incidence of cardiovascular and neurological diseases as comorbid disorders that are commonly linked to inflammation. While…”
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Daily HIV pre-exposure prophylaxis (PrEP) with tenofovir disoproxil fumarate-emtricitabine reduced Streptococcus and increased Erysipelotrichaceae in rectal microbiota
Published in Scientific reports (12-10-2018)“…Daily PrEP is highly effective at preventing HIV-1 acquisition, but risks of long-term tenofovir disoproxil fumarate plus emtricitabine (TDF-FTC) include renal…”
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