Search Results - "Longair, Mark"

Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes by LONGAIR, Mark H, BAKER, Dean A, ARMSTRONG, J. Douglas

“…Advances in techniques to sparsely label neurons unlock the potential to reconstruct connectivity from 3D image stacks acquired by light microscopy. We present…”
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A high-level 3D visualization API for Java and ImageJ by Schmid, Benjamin, Schindelin, Johannes, Cardona, Albert, Longair, Mark, Heisenberg, Martin

“…Current imaging methods such as Magnetic Resonance Imaging (MRI), Confocal microscopy, Electron Microscopy (EM) or Selective Plane Illumination Microscopy…”
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TrakEM2 software for neural circuit reconstruction by Cardona, Albert, Saalfeld, Stephan, Schindelin, Johannes, Arganda-Carreras, Ignacio, Preibisch, Stephan, Longair, Mark, Tomancak, Pavel, Hartenstein, Volker, Douglas, Rodney J

“…A key challenge in neuroscience is the expeditious reconstruction of neuronal circuits. For model systems such as Drosophila and C. elegans, the limiting step…”
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Quantitative neuroanatomy for connectomics in Drosophila by Schneider-Mizell, Casey M, Gerhard, Stephan, Longair, Mark, Kazimiers, Tom, Li, Feng, Zwart, Maarten F, Champion, Andrew, Midgley, Frank M, Fetter, Richard D, Saalfeld, Stephan, Cardona, Albert

“…Neuronal circuit mapping using electron microscopy demands laborious proofreading or reconciliation of multiple independent reconstructions. Here, we describe…”
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Fiji: an open-source platform for biological-image analysis by Schindelin, Johannes, Arganda-Carreras, Ignacio, Frise, Erwin, Kaynig, Verena, Longair, Mark, Pietzsch, Tobias, Preibisch, Stephan, Rueden, Curtis, Saalfeld, Stephan, Schmid, Benjamin, Tinevez, Jean-Yves, White, Daniel James, Hartenstein, Volker, Eliceiri, Kevin, Tomancak, Pavel, Cardona, Albert

“…Presented is an overview of the image-analysis software platform Fiji, a distribution of ImageJ that updates the underlying ImageJ architecture and adds modern…”
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INCF Swiss Node: Neural Reconstruction by Mark, Longair

“…Abstract only…”
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BrainTrap: a database of 3D protein expression patterns in the Drosophila brain by Knowles-Barley, Seymour, Longair, Mark, Armstrong, J Douglas

“…Protein-trap strains of Drosophila melanogaster provide a very useful tool for examining the 3D-expression patterns of proteins and purification of protein…”
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Virtual Fly Brain: An image-linked ontology of the Drosophila Brain by Osumi-Sutherland, David, Longair, Mark, Armstrong, J. Douglas

“…Abstract only…”
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Computational neuroanatomy of the central complex of drosophila melanogaster by Longair, Mark

“…In many different insect species the highly conserved neuropil regions known as the central complex or central body complex have been shown to be important in…”
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