Search Results - "Lipuma, J."

The Changing Microbial Epidemiology in Cystic Fibrosis by Lipuma, John J

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Microbiology, genomics, and clinical significance of the Pseudomonas fluorescens species complex, an unappreciated colonizer of humans by Scales, Brittan S, Dickson, Robert P, LiPuma, John J, Huffnagle, Gary B

“…Pseudomonas fluorescens is not generally considered a bacterial pathogen in humans; however, multiple culture-based and culture-independent studies have…”
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Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species, Burkholderia contaminans sp. nov. and Burkholderia lata sp. nov by Vanlaere, Elke, Baldwin, Adam, Gevers, Dirk, Henry, Deborah, De Brandt, Evie, LiPuma, John J, Mahenthiralingam, Eshwar, Speert, David P, Dowson, Chris, Vandamme, Peter

“…1 Laboratorium voor Microbiologie, Universiteit Gent, K. L. Ledeganckstraat 35, B-9000 Gent, Belgium 2 Department of Biological Sciences, Warwick University,…”
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A Multilocus Sequence Typing Scheme Implies Population Structure and Reveals Several Putative Novel Achromobacter Species by SPILKER, Theodore, VANDAMME, Peter, LIPUMA, John J

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PCR-Based Assay for Differentiation of Pseudomonas aeruginosa from Other Pseudomonas Species Recovered from Cystic Fibrosis Patients by SPILKER, Theodore, COENYE, Tom, VANDAMME, Peter, LIPUMA, John J

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The Microbiome in Cystic Fibrosis by Huang, Yvonne J., MD, LiPuma, John J., MD

“…Observations from studies during the last decade have changed the conventional view of cystic fibrosis (CF) microbiology, which has traditionally focused on a…”
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Decade-long bacterial community dynamics in cystic fibrosis airways by Zhao, Jiangchao, Schloss, Patrick D, Kalikin, Linda M, Carmody, Lisa A, Foster, Bridget K, Petrosino, Joseph F, Cavalcoli, James D, VanDevanter, Donald R, Murray, Susan, Li, Jun Z, Young, Vincent B, LiPuma, John J

“…The structure and dynamics of bacterial communities in the airways of persons with cystic fibrosis (CF) remain largely unknown. We characterized the bacterial…”
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Changing Epidemiology of the Respiratory Bacteriology of Patients With Cystic Fibrosis by Salsgiver, Elizabeth L., MPH, Fink, Aliza K., DSc, Knapp, Emily A., BA, LiPuma, John J., MD, Olivier, Kenneth N., MD, Marshall, Bruce C., MD, Saiman, Lisa, MD, MPH

“…Background Monitoring potential changes in the epidemiology of cystic fibrosis (CF) pathogens furthers our understanding of the potential impact of…”
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Modeling the Impact of Antibiotic Exposure on Human Microbiota by Zhao, Jiangchao, Murray, Susan, LiPuma, John J.

“…Human-associated microbial communities play important roles in health and disease. Antibiotic administration is arguably one of the most important modifiable…”
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Fluctuations in airway bacterial communities associated with clinical states and disease stages in cystic fibrosis by Carmody, Lisa A, Caverly, Lindsay J, Foster, Bridget K, Rogers, Mary A M, Kalikin, Linda M, Simon, Richard H, VanDevanter, Donald R, LiPuma, John J

“…Bacteria that infect the airways of persons with cystic fibrosis (CF) include a group of well-described opportunistic pathogens as well as numerous, mainly…”
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Microbial community organization designates distinct pulmonary exacerbation types and predicts treatment outcome in cystic fibrosis by Widder, Stefanie, Carmody, Lisa A., Opron, Kristopher, Kalikin, Linda M., Caverly, Lindsay J., LiPuma, John J.

“…Polymicrobial infection of the airways is a hallmark of obstructive lung diseases such as cystic fibrosis (CF), non-CF bronchiectasis, and chronic obstructive…”
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Impact of Burkholderia Infection on Lung Transplantation in Cystic Fibrosis by Murray, Susan, Charbeneau, Jeffery, Marshall, Bruce C, LiPuma, John J

“…Lung transplantation offers the only survival option for patients with cystic fibrosis (CF) with end-stage pulmonary disease. Infection with Burkholderia…”
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Longitudinal bacterial prevalence in cystic fibrosis airways: Fact and artifact by VanDevanter, D.R., LiPuma, J.J., Konstan, M.W.

“…•CF airways are prone to opportunistic infections that can drive local inflammation.•Prevalence changes were studied from 2001-2019 for 7 CF bacterial…”
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Biofilms in Full-Scale Drinking Water Ozone Contactors Contribute Viable Bacteria to Ozonated Water by Kotlarz, Nadine, Rockey, Nicole, Olson, Terese M, Haig, Sarah-Jane, Sanford, Larry, LiPuma, John J, Raskin, Lutgarde

“…Concentrations of viable microbial cells were monitored using culture-based and culture-independent methods across multichamber ozone contactors in a…”
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Expanded Multilocus Sequence Typing for Burkholderia Species by SPILKER, Theodore, BALDWIN, Adam, BUMFORD, Amy, DOWSON, Chris G, MAHENTHIRALINGAM, Eshwar, LIPUMA, John J

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Population Structure, Molecular Epidemiology, and β-Lactamase Diversity among Stenotrophomonas maltophilia Isolates in the United States by Mojica, Maria F, Rutter, Joseph D, Taracila, Magdalena, Abriata, Luciano A, Fouts, Derrick E, Papp-Wallace, Krisztina M, Walsh, Thomas J, LiPuma, John J, Vila, Alejandro J, Bonomo, Robert A

“…is a Gram-negative, nonfermenting, environmental bacillus that is an important cause of nosocomial infections, primarily associated with the respiratory tract…”
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Burkholderia cepacia Complex Taxon K: Where to Split? by Depoorter, Eliza, De Canck, Evelien, Peeters, Charlotte, Wieme, Anneleen D, Cnockaert, Margo, Zlosnik, James E A, LiPuma, John J, Coenye, Tom, Vandamme, Peter

“…The objective of the present study was to provide an updated classification for complex (Bcc) taxon K isolates. A representative set of 39 taxon K isolates…”
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Comparative Genomics of Pandoraea, a Genus Enriched in Xenobiotic Biodegradation and Metabolism by Peeters, Charlotte, De Canck, Evelien, Cnockaert, Margo, De Brandt, Evie, Snauwaert, Cindy, Verheyde, Bart, Depoorter, Eliza, Spilker, Theodore, LiPuma, John J., Vandamme, Peter

“…Comparative analysis of partial gyrB , recA , and gltB gene sequences of 84 Pandoraea reference strains and field isolates revealed several clusters that…”
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Significance of the microbiome in obstructive lung disease by Han, Meilan K, Huang, Yvonne J, Lipuma, John J, Boushey, Homer A, Boucher, Richard C, Cookson, William O, Curtis, Jeffrey L, Erb-Downward, John, Lynch, Susan V, Sethi, Sanjay, Toews, Galen B, Young, Vincent B, Wolfgang, Matthew C, Huffnagle, Gary B, Martinez, Fernando J

“…The composition of the lung microbiome contributes to both health and disease, including obstructive lung disease. Because it has been estimated that over 70%…”
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Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov by Vandamme, Peter A, Peeters, Charlotte, Cnockaert, Margo, Inganäs, Elisabeth, Falsen, Enevold, Moore, Edward R B, Nunes, Olga C, Manaia, Célia M, Spilker, Theodore, LiPuma, John J

“…The phenotypic and genotypic characteristics of four Bordetella hinzii-like strains from human respiratory specimens and representing nrdA gene sequence based…”
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