Search Results - "Lindahl, Erik R."
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1
Discovery of lipid binding sites in the ligand-gated ion channel GLIC through simulations and Cryo-EM
Published in Biophysical journal (10-02-2023)Get full text
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2
Modulation of a ligand-gated ion channel by an amphetamine derivative
Published in Biophysical journal (10-02-2023)Get full text
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3
Molecular dynamics simulations of neuronal nicotinic acetylcholine receptor allosteric modulation
Published in Biophysical journal (10-02-2023)Get full text
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4
Structural characterization of pH- and calcium-modulated open and closed states of the pentameric ligand-gated ion channel DeCLIC
Published in Biophysical journal (10-02-2023)Get full text
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5
Assessment of Homology Templates and an Anesthetic Binding Site within the γ-Aminobutyric Acid Receptor
Published in Anesthesiology (Philadelphia) (01-11-2013)“…Anesthetics mediate portions of their activity via modulation of the γ-aminobutyric acid receptor (GABAaR). Although its molecular structure remains unknown,…”
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Molecular dynamics simulations
Published in Methods in molecular biology (Clifton, N.J.) (2008)“…Molecular simulation is a very powerful toolbox in modern molecular modeling, and enables us to follow and understand structure and dynamics with extreme…”
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7
Uptake Dynamics in the Lactose Permease (LacY) Membrane Protein Transporter
Published in Biophysical journal (15-02-2019)Get full text
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8
cryo-EM and small-angle scattering of a pentameric ligand-gated ion channel reveals a dynamic regulatory domain
Published in Biophysical journal (11-02-2022)Get full text
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Functional and structural characterization of a novel pH-modulated open state of a pentameric ligand-gated ion channel
Published in Biophysical journal (11-02-2022)Get full text
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10
Differential interactions of closed, open, and desensitized states of the α7 nicotinic acetylcholine receptor with lipidic modulators
Published in Biophysical journal (11-02-2022)Get full text
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11
Phospholipid interaction sites in a ligand-gated ion channel from simulations and cryo-electron microscopy
Published in Biophysical journal (11-02-2022)Get full text
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12
Atomic models from low resolution maps with density-guided MD simulations
Published in Biophysical journal (11-02-2022)Get full text
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13
Combining Cryo-EM and Simulation to Understand Ligand Binding in Pentameric Ligand Gated Ion Channels
Published in Biophysical journal (15-02-2019)Get full text
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14
Using Lambda Dynamics to Study Protonation States of GLIC
Published in Biophysical journal (12-02-2021)Get full text
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15
Conformational Landscapes of Ligand-Gated Ion Channel GLIC from Markov State Modeling
Published in Biophysical journal (12-02-2021)Get full text
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16
Molecular Dynamics Simulation of Ligand Binding and Ion Permeation in a Ganglionic Nicotinic Receptor
Published in Biophysical journal (07-02-2020)Get full text
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Balancing Stereochemistry and Goodness-of-Fit for Automated Simulation-Based Refinement into Cryo-EM Maps
Published in Biophysical journal (12-02-2021)Get full text
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18
Probing Allosteric Networks in Ligand-Gated Ion Channel Gating by Electrophysiology and Molecular Dynamics in the Model Receptor GLIC
Published in Biophysical journal (12-02-2021)Get full text
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19
Heterogeneous Populations of Ligand-Gated Ion Channel, GLIC, Revealed by Cryo-Electron Microscopy and Simulations
Published in Biophysical journal (12-02-2021)Get full text
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20
Agonist Selectivity and Ion Permeation in the α3β4 Ganglionic Nicotinic Receptor
Published in Biophysical journal (07-02-2020)Get full text
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