Search Results - "Likhoshvai, Vitaly A."

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  1. 1

    Limit cycles in models of circular gene networks regulated by negative feedback loops by Likhoshvai, Vitaly A, Golubyatnikov, Vladimir P, Khlebodarova, Tamara M

    Published in BMC bioinformatics (14-09-2020)
    “…The regulatory feedback loops that present in structural and functional organization of molecular-genetic systems and the phenomenon of the regulatory signal…”
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  2. 2

    On the dynamical aspects of local translation at the activated synapse by Khlebodarova, Tamara M, Kogai, Vladislav V, Likhoshvai, Vitaly A

    Published in BMC bioinformatics (14-09-2020)
    “…The key role in the dynamic regulation of synaptic protein turnover belongs to the Fragile X Mental Retardation Protein, which regulates the efficiency of…”
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  3. 3

    Impact of Negative Feedbacks on De Novo Pyrimidines Biosynthesis in Escherichia coli by Akberdin, Ilya R, Kozlov, Konstantin N, Kazantsev, Fedor V, Fadeev, Stanislav I, Likhoshvai, Vitaly A, Khlebodarova, Tamara M

    “…Earlier studies aimed at investigating the metabolism of endogenous nucleoside triphosphates in synchronous cultures of cells revealed an auto-oscillatory mode…”
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  4. 4

    Evolution and extinction can occur rapidly: a modeling approach by Likhoshvai, Vitaly A, Khlebodarova, Tamara M

    Published in PeerJ (San Francisco, CA) (13-04-2021)
    “…Fossil record of Earth describing the last 500 million years is characterized by evolution discontinuity as well as recurring global extinctions of some…”
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  5. 5

    On the control mechanisms of the nitrite level in Escherichia coli cells: the mathematical model by Khlebodarova, Tamara M, Ree, Nataly A, Likhoshvai, Vitaly A

    Published in BMC microbiology (27-01-2016)
    “…Due to a high toxicity of nitrite and its metabolites, it is of high interest to study mechanisms underlying the low NO2 level maintenance in the cell. During…”
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  6. 6

    A plausible mechanism for auxin patterning along the developing root by Mironova, Victoria V, Omelyanchuk, Nadezda A, Yosiphon, Guy, Fadeev, Stanislav I, Kolchanov, Nikolai A, Mjolsness, Eric, Likhoshvai, Vitaly A

    Published in BMC systems biology (21-07-2010)
    “…In plant roots, auxin is critical for patterning and morphogenesis. It regulates cell elongation and division, the development and maintenance of root apical…”
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  7. 7
  8. 8

    Mathematical modeling of auxin transport in protoxylem and protophloem of Arabidopsis thaliana root tips by Novoselova, Ekaterina S, Mironova, Victoria V, Omelyanchuk, Nadya A, Kazantsev, Fedor V, Likhoshvai, Vitaly A

    “…Phytohormone auxin is the main regulator of plant growth and development. Nonuniform auxin distribution in plant tissue sets positional information, which…”
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  9. 9

    Chaos and Hyperchaos in a Model of Ribosome Autocatalytic Synthesis by Likhoshvai, Vitaly A., Kogai, Vladislav V., Fadeev, Stanislav I., Khlebodarova, Tamara M.

    Published in Scientific reports (12-12-2016)
    “…Any vital activities of the cell are based on the ribosomes, which not only provide the basic machinery for the synthesis of all proteins necessary for cell…”
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  10. 10

    Chaos and hyperchaos in simple gene network with negative feedback and time delays by Khlebodarova, Tamara M, Kogai, Vladislav V, Fadeev, Stanislav I, Likhoshvai, Vitaly A

    “…Today there are examples that prove the existence of chaotic dynamics at all levels of organization of living systems, except intracellular, although such a…”
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  11. 11

    Alternative splicing can lead to chaos by Likhoshvai, Vitaly A, Kogai, Vladislav V, Fadeev, Stanislav I, Khlebodarova, Tamara M

    “…Alternative splicing is a widespread phenomenon in higher eukaryotes, where it serves as a mechanism to increase the functional diversity of proteins. This…”
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  12. 12

    Mathematical modeling of bacterial cell cycle: the problem of coordinating genome replication with cell growth by Likhoshvai, Vitaly A, Khlebodarova, Tamara M

    “…In this paper, we perform an analysis of bacterial cell-cycle models implementing different strategies to coordinately regulate genome replication and cell…”
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  13. 13

    On the chaos in gene networks by Likhoshvai, Vitaly A, Fadeev, Stanislav I, Kogai, Vladislav V, Khlebodarova, Tamara M

    “…The methods for constructing "chaotic" nonlinear systems of differential equations modeling gene networks of arbitrary structure and dimensionality with…”
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  14. 14

    How multiple auxin responsive elements may interact in plant promoters: a reverse problem solution by Mironova, Victoria V, Omelyanchuk, Nadya A, Savina, Maria S, Ponomarenko, Petr M, Ponomarenko, Mikhail P, Likhoshvai, Vitaly A, Kolchanov, Nikolay A

    “…Plant hormone auxin is a key regulator of growth and development. Auxin affects gene expression through ARF transcription factors, which bind specifically…”
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  15. 15

    Mathematical model for suppression of subgenomic hepatitis C virus RNA replication in cell culture by Mishchenko, Elena L, Bezmaternykh, Kirill D, Likhoshvai, Vitaly A, Ratushny, Alexander V, Khlebodarova, Tamara M, Yu Sournina, Natalia, Ivanisenko, Vladimir A, Kolchanov, Nikolai A

    “…A mathematical model for suppression of the hepatitis C virus RNA replicon replication in Huh-7 cell culture in the presence of potential drugs was built…”
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  16. 16

    Impact of Negative Feedbacks on De Novo Pyrimidines Biosynthesis in IEscherichia coli/I by Akberdin, Ilya R, Kozlov, Konstantin N, Kazantsev, Fedor V, Fadeev, Stanislav I, Likhoshvai, Vitaly A, Khlebodarova, Tamara M

    “…Earlier studies aimed at investigating the metabolism of endogenous nucleoside triphosphates in synchronous cultures of E. coli cells revealed an…”
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    Journal Article
  17. 17

    A cellular automaton to model the development of primary shoot meristems of Arabidopsis thaliana by Akberdin, Ilya R, Ozonov, Evgeniy A, Mironova, Victoria V, Omelyanchuk, Nadezda A, Likhoshvai, Vitaly A, Gorpinchenko, Dmytry N, Kolchanov, Nikolai A

    “…Development of organisms is a very complex process in which a lot of gene networks of different cell types are integrated. Development of a cellular automaton…”
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  18. 18

    GeneNet Database: Description and Modeling of Gene Networks by Kolchanov, Nikolay A., Nedosekina, Eugenia A., Ananko, Elena A., Likhoshvai, Vitaly A., Podkolodny, Nikolay L., Ratushny, Alexander V., Stepanenko, Irina L., Podkolodnaya, Olga A., Ignatieva, Elena V., Matushkin, Yury G.

    Published in In silico biology (2002)
    “…Almost all cellular processes in an organism are controlled by gene networks. Here we report on the analysis of gene networks functioning using two associated…”
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  19. 19

    A computer system for analysis and integrated description of regulation of the molecular-genetic system of interferon induction and action by Belova, Olga E., Likhoshvai, Vitaly A., Bazhan, Sergey I., Kulichkov, Vladimir A.

    Published in Bioinformatics (01-04-1995)
    “…A new theoretical approach to elaboration of an information-analytical integrated knowledge base containing data on regulation and function of biological…”
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