Search Results - "Liehrmann, Arnaud"

Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models by Liehrmann, Arnaud, Rigaill, Guillem, Hocking, Toby Dylan

“…Histone modification constitutes a basic mechanism for the genetic regulation of gene expression. In early 2000s, a powerful technique has emerged that couples…”
Get full text

Full Length Transcriptome Highlights the Coordination of Plastid Transcript Processing by Guilcher, Marine, Liehrmann, Arnaud, Seyman, Chloé, Blein, Thomas, Rigaill, Guillem, Castandet, Benoit, Delannoy, Etienne

“…Plastid gene expression involves many post-transcriptional maturation steps resulting in a complex transcriptome composed of multiple isoforms. Although…”
Get full text

Ms.FPOP: A Fast Exact Segmentation Algorithm with a Multiscale Penalty by Liehrmann, Arnaud, Rigaill, Guillem

Get full text

An mTRAN-mRNA interaction mediates mitochondrial translation initiation in plants by Tran, Huy Cuong, Schmitt, Vivian, Lama, Sbatie, Wang, Chuande, Launay-Avon, Alexandra, Bernfur, Katja, Sultan, Kristin, Khan, Kasim, Brunaud, Véronique, Liehrmann, Arnaud, Castandet, Benoît, Levander, Fredrik, Rasmusson, Allan G., Mireau, Hakim, Delannoy, Etienne, Van Aken, Olivier

“…Plant mitochondria represent the largest group of respiring organelles on the planet. Plant mitochondrial messenger RNAs (mRNAs) lack Shine-Dalgarno-like…”
Get full text

DiffSegR: an RNA-seq data driven method for differential expression analysis using changepoint detection by Liehrmann, Arnaud, Delannoy, Etienne, Launay-Avon, Alexandra, Gilbault, Elodie, Loudet, Olivier, Castandet, Benoît, Rigaill, Guillem

“…Abstract To fully understand gene regulation, it is necessary to have a thorough understanding of both the transcriptome and the enzymatic and RNA-binding…”
Get full text

Ms.FPOP: An Exact and Fast Segmentation Algorithm With a Multiscale Penalty by Liehrmann, Arnaud, Rigaill, Guillem

“…Given a time series in $R^n$ with a piecewise constant mean and independent noises, we propose an exact dynamic programming algorithm to minimize a least…”
Get full text

Exponential Integral Solutions for Fixation Time in Wright-Fisher Model With Selection by Runge, Vincent, Liehrmann, Arnaud, Spinga, Pauline

“…In this work we derive new analytic expressions for fixation time in Wright-Fisher model with selection. The three standard cases for fixation are considered:…”
Get full text

Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models by Liehrmann, Arnaud, Rigaill, Guillem, Hocking, Toby Dylan

“…Motivation: Histone modification constitutes a basic mechanism for the genetic regulation of gene expression. In early 2000s, a powerful technique has emerged…”
Get full text