Search Results - "Leupin, Werner"

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    Protonation Equilibria of Hoechst 33258 in Aqueous Solution by Ladinig, Manfred, Leupin, Werner, Meuwly, Markus, Respondek, Michal, Wirz, Jakob, Zoete, Vincent

    Published in Helvetica chimica acta (01-01-2005)
    “…The bis‐benzimidazole derivative Hoechst 33258 (2′‐(4‐hydroxyphenyl)‐5‐(4‐methylpiperazin‐1‐yl)‐2,5′‐bi‐1H‐benzimidazole) binds to the minor groove of DNA…”
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    Tris-benzimidazole derivatives : Design, synthesis and DNA sequence recognition by JI, Yu-Hua, BUR, Daniel, HÄSLER, Walter, SCHMITT, Valérie Runtz, DORN, Arnulf, BAILLY, Christian, WARING, Michael J, HOCHSTRASSER, Remo, LEUPIN, Werner

    Published in Bioorganic & medicinal chemistry (01-11-2001)
    “…Two tris-benzimidazole derivatives have been designed and synthesized based on the known structures of the bis-benzimidazole stain Hoechst 33258 complexed to…”
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    Hydration of DNA in aqueous solution: NMR evidence for a kinetic destabilization of the minor groove hydration of d-(TTAA)2 versus d-(AATT)2 segments by Liepinsh, Edvards, Leupin, Werner, Otting, Gottfried

    Published in Nucleic acids research (25-06-1994)
    “…The residence times of the hydration water molecules near the base protons of d-(GTGGAATTCCAC)2 and d-(GTGGTTAACCAC)2 were investigated by nuclear magnetic…”
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    Determination of the NMR solution structure of the Hoechst 33258-d(GTGGAATTCCAC)2 complex and comparison with the X-ray crystal structure by Fede, A, Billeter, M, Leupin, W, Wüthrich, K

    Published in Structure (London) (15-11-1993)
    “…The chromosomal stain, Hoechst 33258, binds to the minor groove of the DNA double helix and specifically recognizes a run of four A-T base pairs. Extensive…”
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    Designer DNA-Binding Drugs: The Crystal Structure of a Meta-Hydroxy Analogue of Hoechst 33258 Bound to d(CGCGAATTCGCG)2 by Clark, George R., Squire, Christopher J., Gray, Emily J., Leupin, Werner, Neidle, Stephen

    Published in Nucleic acids research (15-12-1996)
    “…An analogue of the DNA binding compound Hoechst 33258, which has the para hydroxyl group altered to be at the meta position, together with the replacement of…”
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    Minor Groove Hydration of DNA in Aqueous Solution: Sequence-dependent Next Neighbor Effect of the Hydration Lifetimes in d(TTAA)2 Segments Measured by NMR Spectroscopy by Jacobson, Anders, Leupin, Werner, Liepinsh, Edvards, Otting, Gottfried

    Published in Nucleic acids research (01-08-1996)
    “…The hydration in the minor groove of double stranded DNA fragments containing the sequences 5′-dTTAAT, 5′-dTTAAC, 5′-dTTAAA and 5′-dTTAAG was investigated by…”
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    DNA Binding Properties of the Purified Antennapedia Homeodomain by Affolter, Markus, Percival-Smith, Anthony, Muller, Martin, Leupin, Werner, Gehring, Walter J.

    “…The in vitro DNA binding properties of a purified 68-amino acid Antennapedia homeodomain (Antp HD) peptide have been analyzed. Equilibrium and kinetic binding…”
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    Isohelicity and Phasing in Drug−DNA Sequence Recognition:  Crystal Structure of a Tris(benzimidazole)−Oligonucleotide Complex by Clark, George R, Gray, Emily J, Neidle, Stephen, Li, Yu-Hua, Leupin, Werner

    Published in Biochemistry (Easton) (29-10-1996)
    “…The crystal structure is reported of a tris(benzimidazole) analogue of the minor-groove drug Hoechst 33258 bound to the sequence d(CGCAAATTTGCG)2. The…”
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    Distamycin-induced inhibition of homeodomain--DNA complexes by Dorn, A, Affolter, M, Muller, M, Gehring, W.J, Leupin, W

    Published in The EMBO journal (1992)
    “…The mobility shift assay was used to study the competition of the minor groove binder distamycin A with either an Antennapedia homeodomain (Antp HD) peptide or…”
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    The Width of the Minor Groove Affects the Binding of the Bisquaternary Heterocycle SN-6999 to Duplex DNA by Rydzewski, Jan M., Leupin, Werner, Chazin, Walter

    Published in Nucleic acids research (01-04-1996)
    “…A complex between d(GGGAAAAACGG)·d(CCGTTTTTCCC) and the minor groove binding drug SN-6999 has been studied by 1H nuclear magnetic resonance spectroscopy. The…”
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    Two-dimensional proton nuclear magnetic resonance investigation of the synthetic deoxyribonucleic acid decamer d(ATATCGATAT)2 by FEIGON, J, LEUPIN, W, DENNY, W. A, KEARNS, D. R

    Published in Biochemistry (Easton) (06-12-1983)
    “…In this study two-dimensional NMR techniques (COSY and NOESY) have been used in conjunction with one-dimensional NMR results to complete the assignment of the…”
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    NMR studies of DNA duplexes singly cross-linked by different synthetic linkers by Altmann, Serge, Labhardt, Alexander M., Bur, Daniel, Lehmann, Christain, Bannwarth, Willi, Billeter, Martin, Wüthrich, Kurt, Leupin, Werner

    Published in Nucleic acids research (11-12-1995)
    “…Molecular modelling studies resulted in the design of a variety of non-nucleotidic covalent linkers to bridge the 3′-end of the (+)-strand and the 5′-end of…”
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    Two-dimensional NMR studies of d(GGTTAATGCGGT).d-(ACCGCATTAACC) complexed with the minor groove binding drug SN-6999 by SHIOW-MEEI CHEN, LEUPIN, W, CHAZIN, W. J

    Published in Biochemistry (Easton) (12-05-1992)
    “…The dodecadeoxynucleotide duplex d(GGTTAATGCGGT).d(ACCGCATTAACC) and its 1:1 complex with the minor groove binding drug SN-6999 have been prepared and studied…”
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    Homeodomain proteins in development and therapy by Dorn, A, Affolter, M, Gehring, W J, Leupin, W

    “…Homeobox genes encode transcriptional regulators found in all organisms ranging from yeast to humans. In Drosophila, a specific class of homeobox genes, the…”
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    Synthesis of pyrene—acridine bis-intercalators and effects of binding to DNA by Bassani, Dario M., Wirz, Jakob, Hochstrasser, Remo, Leupin, Werner

    “…A bis-intercalating compound containing pyrene and 9-aminoacridine chromophores ( N-(5-(1-pyrenyl)-pentyl)-6-(9-acridinylamino) hexylamide, I), was prepared…”
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