Search Results - "Leahy, C"

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    Anaerobically Grown Escherichia coli Has an Enhanced Mutation Rate and Distinct Mutational Spectra by Shewaramani, Sonal, Finn, Thomas J, Leahy, Sinead C, Kassen, Rees, Rainey, Paul B, Moon, Christina D

    Published in PLoS genetics (19-01-2017)
    “…Oxidative stress is a major cause of mutation but little is known about how growth in the absence of oxygen impacts the rate and spectrum of mutations. We…”
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    Improving operational flood ensemble prediction by the assimilation of satellite soil moisture: comparison between lumped and semi-distributed schemes by Alvarez-Garreton, C, Ryu, D, Western, A. W, Su, C.-H, Crow, W. T, Robertson, D. E, Leahy, C

    Published in Hydrology and earth system sciences (09-04-2015)
    “…Assimilation of remotely sensed soil moisture data (SM-DA) to correct soil water stores of rainfall-runoff models has shown skill in improving streamflow…”
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    Determining the culturability of the rumen bacterial microbiome by Creevey, Christopher J., Kelly, William J., Henderson, Gemma, Leahy, Sinead C.

    Published in Microbial biotechnology (01-09-2014)
    “…Summary The goal of the Hungate1000 project is to generate a reference set of rumen microbial genome sequences. Toward this goal we have carried out a…”
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    Homelessness in pregnancy by Creswell, L., Leahy, C., McNamee, E., Lindow, S.W., O'Connell, M.P.

    “…•Homeless pregnant women are at higher risk of preterm birth compared to those with stable living arrangements.•Homeless women are more likely be affected by…”
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    Genomic insights into the physiology of Quinella, an iconic uncultured rumen bacterium by Kumar, Sandeep, Altermann, Eric, Leahy, Sinead C., Jauregui, Ruy, Jonker, Arjan, Henderson, Gemma, Kittelmann, Sandra, Attwood, Graeme T., Kamke, Janine, Waters, Sinéad M., Patchett, Mark L., Janssen, Peter H.

    Published in Nature communications (20-10-2022)
    “…Quinella is a genus of iconic rumen bacteria first reported in 1913. There are no cultures of these bacteria, and information on their physiology is scarce and…”
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    Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework by Henderson, Gemma, Yilmaz, Pelin, Kumar, Sandeep, Forster, Robert J, Kelly, William J, Leahy, Sinead C, Guan, Le Luo, Janssen, Peter H

    Published in PeerJ (San Francisco, CA) (05-03-2019)
    “…The taxonomy and associated nomenclature of many taxa of rumen bacteria are poorly defined within databases of 16S rRNA genes. This lack of resolution results…”
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    Microindentation of fresh soft biological tissue: A rapid tissue sectioning and mounting protocol by McCarthy, Clíona M, McKevitt, Kevin L, Connolly, Sinéad A, Andersson, Isabel, Leahy, Fiona C, Egan, Siobhan, Moloney, Michael A, Kavanagh, Eamon G, Peirce, Colin, Cunnane, Eoghan M, McGourty, Kieran D, Walsh, Michael T, Mulvihill, John J E

    Published in PloS one (29-02-2024)
    “…Microindentation of fresh biological tissues is necessary for the creation of 3D biomimetic models that accurately represent the native extracellular matrix…”
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    Hydrogen and formate production and utilisation in the rumen and the human colon by Kelly, William J, Mackie, Roderick I, Attwood, Graeme T, Janssen, Peter H, McAllister, Tim A, Leahy, Sinead C

    Published in Animal microbiome (14-03-2022)
    “…Molecular hydrogen (H ) and formate (HCOO ) are metabolic end products of many primary fermenters in the mammalian gut. Both play a vital role in fermentation…”
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    Presence of Novel, Potentially Homoacetogenic Bacteria in the Rumen as Determined by Analysis of Formyltetrahydrofolate Synthetase Sequences from Ruminants by HENDERSON, Gemma, NAYLOR, Graham E, LEAHY, Sinead C, JANSSEN, Peter H

    Published in Applied and Environmental Microbiology (01-04-2010)
    “…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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    Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria by Gilbert, Rosalind A, Kelly, William J, Altermann, Eric, Leahy, Sinead C, Minchin, Catherine, Ouwerkerk, Diane, Klieve, Athol V

    Published in Frontiers in microbiology (05-12-2017)
    “…The rumen is known to harbor dense populations of bacteriophages (phages) predicted to be capable of infecting a diverse range of rumen bacteria. While…”
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    Methanobrevibacter boviskoreani JH1T growth on alcohols allows development of a high throughput bioassay to detect methanogen inhibition by Li, Yang, Crouzet, Laureen, Kelly, William J., Reid, Peter, Leahy, Sinead C., Attwood, Graeme T.

    Published in Current research in microbial sciences (01-01-2023)
    “…•Methanobrevibacter boviskoreani JHIT, a rumen methanogen, can grow without pressurised hydrogen, using a variety of short chain alcohols.•Results demonstrate…”
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    Chromosomal diversity in Lactococcus lactis and the origin of dairy starter cultures by Kelly, William J, Ward, Lawrence J H, Leahy, Sinead C

    Published in Genome biology and evolution (01-01-2010)
    “…A large collection of Lactococcus lactis strains, including wild-type isolates and dairy starter cultures, were screened on the basis of their phenotype and…”
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    The glycobiome of the rumen bacterium Butyrivibrio proteoclasticus B316(T) highlights adaptation to a polysaccharide-rich environment by Kelly, William J, Leahy, Sinead C, Altermann, Eric, Yeoman, Carl J, Dunne, Jonathan C, Kong, Zhanhao, Pacheco, Diana M, Li, Dong, Noel, Samantha J, Moon, Christina D, Cookson, Adrian L, Attwood, Graeme T

    Published in PloS one (03-08-2010)
    “…Determining the role of rumen microbes and their enzymes in plant polysaccharide breakdown is fundamental to understanding digestion and maximising…”
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    Reclassification of Clostridium proteoclasticum as Butyrivibrio proteoclasticus comb. nov., a butyrate-producing ruminal bacterium by Moon, Christina D, Pacheco, Diana M, Kelly, William J, Leahy, Sinead C, Li, Dong, Kopecny, Jan, Attwood, Graeme T

    “…1 Food, Metabolism and Microbiology Section, AgResearch Ltd, Grasslands Research Centre, Tennent Drive, Private Bag 11008, Palmerston North, New Zealand 2…”
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    Occurrence and expression of genes encoding methyl-compound production in rumen bacteria by Kelly, William J, Leahy, Sinead C, Kamke, Janine, Soni, Priya, Koike, Satoshi, Mackie, Roderick, Seshadri, Rekha, Cook, Gregory M, Morales, Sergio E, Greening, Chris, Attwood, Graeme T

    Published in Animal microbiome (14-11-2019)
    “…Digestive processes in the rumen lead to the release of methyl-compounds, mainly methanol and methylamines, which are used by methyltrophic methanogens to form…”
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