Search Results - "LeBlanc, Sébastien"
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OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes
Published in Nucleic acids research (08-01-2021)“…Abstract OpenProt (www.openprot.org) is the first proteogenomic resource supporting a polycistronic annotation model for eukaryotic genomes. It provides a…”
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OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes
Published in Nucleic acids research (08-01-2019)“…Abstract Advances in proteomics and sequencing have highlighted many non-annotated open reading frames (ORFs) in eukaryotic genomes. Genome annotations,…”
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OpenProt 2.0 builds a path to the functional characterization of alternative proteins
Published in Nucleic acids research (05-01-2024)“…Abstract The OpenProt proteogenomic resource (https://www.openprot.org/) provides users with a complete and freely accessible set of non-canonical or…”
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The impacts of implementing recovery innovations: a conceptual framework grounded in qualitative research
Published in International journal of mental health systems (09-10-2022)“…Abstract Background Implementing mental health recovery into services is a policy priority in Canada and globally. To that end, a 5 year study was undertaken…”
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Newfound Coding Potential of Transcripts Unveils Missing Members of Human Protein Communities
Published in Genomics, proteomics & bioinformatics (01-06-2023)“…Recent proteogenomic approaches have led to the discovery that regions of the transcriptome previously annotated as non-coding regions [i.e., untranslated…”
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Translating mental health recovery guidelines into recovery-oriented innovations: A strategy combining implementation teams and a facilitated planning process
Published in Evaluation and program planning (01-04-2022)“…Recovery is the focus of mental health strategies internationally. However, little translation of recovery knowledge has occurred in mental health services…”
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Sustainability in the collaborative economy: A bibliometric analysis reveals emerging interest
Published in Journal of cleaner production (20-09-2018)“…The growing field of the collaborative economy is expanding geometrically and little retrospective work on this evolution has been made so far. A number of…”
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Identifying and understanding the contextual factors that shaped mid-implementation outcomes during the COVID-19 pandemic in organizations implementing mental health recovery innovations into services
Published in Implementation science communications (15-09-2021)“…Seven housing and health services organizations were guided through a process of translating Chapter Six of the Canadian Guidelines for Recovery-Oriented…”
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The CFIR Card Game: a new approach for working with implementation teams to identify challenges and strategies
Published in Implementation science communications (07-01-2021)“…The Consolidated Framework for Implementation Research (CFIR) and the ERIC compilation of implementation strategies are key resources for identifying…”
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Made to break? A taxonomy of business models on product lifetime extension
Published in Journal of cleaner production (10-10-2019)“…This paper contributes to the establishment of product lifetime extension (PLE) as a field of study through development of a framework of product lifetime…”
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Advancing quantitative rigor in the circular economy literature: New methodology for product lifetime extension business models
Published in Resources, conservation and recycling (01-11-2019)“…•This paper frames a for-step methodology for classifying product lifetime extension business models (PLEBM).•The PLEBM framework is used to classify…”
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OpenCustomDB: Integration of Unannotated Open Reading Frames and Genetic Variants to Generate More Comprehensive Customized Protein Databases
Published in Journal of proteome research (05-05-2023)“…Proteomic diversity in biological samples can be characterized by mass spectrometry (MS)-based proteomics using customized protein databases generated from…”
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OpenVar: functional annotation of variants in non-canonical open reading frames
Published in Cell & bioscience (14-08-2022)“…Abstract Background Recent technological advances have revealed thousands of functional open reading frames (ORF) that have eluded reference genome…”
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Deciphering the ghost proteome in ovarian cancer cells by deep proteogenomic characterization
Published in Cell death & disease (30-09-2024)“…Proteogenomics is becoming a powerful tool in personalized medicine by linking genomics, transcriptomics and mass spectrometry (MS)-based proteomics. Due to…”
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Review of a proposed methodology for bibliometric and visualization analyses for organizations: application to the collaboration economy
Published in Journal of marketing analytics (01-06-2019)“…This paper presents the bibliometric and visualization method applied to a dataset of 729 documents published in the collaborative economy research field. Four…”
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Robust Physiological Metrics From Sparsely Sampled Networks
Published in Frontiers in physiology (10-02-2021)“…Physiological and biochemical networks are highly complex, involving thousands of nodes as well as a hierarchical structure. True network structure is also…”
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Du vinyle à YouTube : les habitudes de consommation et de recherche de musique des jeunes adultes québécois
Published in Partnership (27-02-2017)“…Il existe peu d’études récentes sur les habitudes de consommation et le comportement dans la recherche d’information musicale au Québec et au Canada. Pourtant,…”
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Modelling of pathogen-host systems using deeper ORF annotations and transcriptomics to inform proteomics analyses
Published in Computational and structural biotechnology journal (01-01-2020)“…[Display omitted] The Zika virus is a flavivirus that can cause fulminant outbreaks and lead to Guillain-Barré syndrome, microcephaly and fetal demise. Like…”
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Exploring the Alternative Proteome with OpenProt and Mass Spectrometry
Published in Methods in molecular biology (Clifton, N.J.) (2024)“…Proteogenomics has revealed the translation of unannotated open reading frames (ORFs) present in mRNAs and in noncoding RNAs (ncRNAs). OpenProt annotates all…”
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Opérationnaliser les compétences transversales en analyse bibliométrique et en visualisation des réseaux au thème de l’économie collaborative
Published 01-01-2019“…Une analyse bibliométrique utilisant la visualisation de réseaux pour représenter le thème de l’Économie collaborative (ÉC) au sein de la recherche…”
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