Search Results - "Larsen, Mette V."

Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria by LARSEN, Mette V, COSENTINO, Salvatore, LUND, Ole, RASMUSSEN, Simon, FRIIS, Carsten, HASMAN, Henrik, LYKKE MARVIG, Rasmus, JELSBAK, Lars, SICHERITZ-PONTEN, Thomas, USSERY, David W, AARESTRUP, Frank M

“…OA  Article Usage Stats Services JCM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+…”
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Benchmarking of methods for genomic taxonomy by Larsen, Mette V, Cosentino, Salvatore, Lukjancenko, Oksana, Saputra, Dhany, Rasmussen, Simon, Hasman, Henrik, Sicheritz-Pontén, Thomas, Aarestrup, Frank M, Ussery, David W, Lund, Ole

“…One of the first issues that emerges when a prokaryotic organism of interest is encountered is the question of what it is--that is, which species it is. The…”
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Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction by Larsen, Mette V, Lundegaard, Claus, Lamberth, Kasper, Buus, Soren, Lund, Ole, Nielsen, Morten

“…Reliable predictions of Cytotoxic T lymphocyte (CTL) epitopes are essential for rational vaccine design. Most importantly, they can minimize the experimental…”
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What Can We Learn from a Metagenomic Analysis of a Georgian Bacteriophage Cocktail? by Zschach, Henrike, Joensen, Katrine G, Lindhard, Barbara, Lund, Ole, Goderdzishvili, Marina, Chkonia, Irina, Jgenti, Guliko, Kvatadze, Nino, Alavidze, Zemphira, Kutter, Elizabeth M, Hasman, Henrik, Larsen, Mette V

“…Phage therapy, a practice widespread in Eastern Europe, has untapped potential in the combat against antibiotic-resistant bacterial infections. However,…”
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The cancer exome generated by alternative mRNA splicing dilutes predicted HLA class I epitope density by Stranzl, Thomas, Larsen, Mette V, Lund, Ole, Nielsen, Morten, Brunak, Søren

“…Several studies have shown that cancers actively regulate alternative splicing. Altered splicing mechanisms in cancer lead to cancer-specific transcripts…”
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Systematic characterisation of cellular localisation and expression profiles of proteins containing MHC ligands by Juncker, Agnieszka S, Larsen, Mette V, Weinhold, Nils, Nielsen, Morten, Brunak, Søren, Lund, Ole

“…Presentation of peptides on Major Histocompatibility Complex (MHC) molecules is the cornerstone in immune system activation and increased knowledge of the…”
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HLA class I binding 9mer peptides from influenza A virus induce CD4 T cell responses by Wang, Mingjun, Larsen, Mette V, Nielsen, Morten, Harndahl, Mikkel, Justesen, Sune, Dziegiel, Morten H, Buus, Søren, Tang, Sheila T, Lund, Ole, Claesson, Mogens H

“…Identification of human leukocyte antigen class I (HLA-I) restricted cytotoxic T cell (CTL) epitopes from influenza virus is of importance for the development…”
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Improving biotech education through gamified laboratory simulations by Bonde, Mads T, Makransky, Guido, Wandall, Jakob, Larsen, Mette V, Morsing, Mikkel, Jarmer, Hanne, Sommer, Morten O A

“…Gamified laboratory simulations motivate students and improve learning outcomes compared with traditional teaching methods…”
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Use of a Regression Model to Study Host-Genomic Determinants of Phage Susceptibility in MRSA by Zschach, Henrike, Larsen, Mette V, Hasman, Henrik, Westh, Henrik, Nielsen, Morten, Międzybrodzki, Ryszard, Jończyk-Matysiak, Ewa, Weber-Dąbrowska, Beata, Górski, Andrzej

“…is a major agent of nosocomial infections. Especially in methicillin-resistant strains, conventional treatment options are limited and expensive, which has…”
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Cohort Profile: The Danish HIV Cohort Study by Obel, Niels, Engsig, Frederik N, Rasmussen, Line D, Larsen, Mette V, Omland, Lars H, Sørensen, Henrik T

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Exploring how social poetics can be used to understand processes of management learning by Larsen, Mette V, Madsen, Charlotte Ø

“…The purpose of this article is to explore what can be learned about management learning when social poetics is used as a perspective to make sense of how seven…”
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Reads2Type: a web application for rapid microbial taxonomy identification by Saputra, Dhany, Rasmussen, Simon, Larsen, Mette V, Haddad, Nizar, Sperotto, Maria Maddalena, Aarestrup, Frank M, Lund, Ole, Sicheritz-Pontén, Thomas

“…Identification of bacteria may be based on sequencing and molecular analysis of a specific locus such as 16S rRNA, or a set of loci such as in multilocus…”
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CTL epitopes for influenza A including the H5N1 bird flu; genome-, pathogen-, and HLA-wide screening by Wang, Mingjun, Lamberth, Kasper, Harndahl, Mikkel, Røder, Gustav, Stryhn, Anette, Larsen, Mette V, Nielsen, Morten, Lundegaard, Claus, Tang, Sheila T, Dziegiel, Morten H, Rosenkvist, Jørgen, Pedersen, Anders E, Buus, Søren, Claesson, Mogens H, Lund, Ole

“…Abstract The purpose of the present study is to perform a global screening for new immunogenic HLA class I (HLA-I) restricted cytotoxic T cell (CTL) epitopes…”
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Impact of injecting drug use on mortality in Danish HIV-infected patients: a nation-wide population-based cohort study by Larsen, Mette V., Omland, Lars H., Gerstoft, Jan, Larsen, Carsten S., Jensen, Janne, Obel, Niels, Kronborg, Gitte

“…ABSTRACT Objectives  To estimate the impact of injecting drug use (IDU) on mortality in HIV‐infected patients in the highly active antiretroviral therapy…”
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Identification of MHC class II restricted T-cell-mediated reactivity against MHC class I binding Mycobacterium tuberculosis peptides by Wang, Mingjun, Tang, Sheila T, Stryhn, Anette, Justesen, Sune, Larsen, Mette V, Dziegiel, Morten H, Lewinsohn, David M, Buus, Søren, Lund, Ole, Claesson, Mogens H

“…Major histocompatibility complex (MHC) class I restricted cytotoxic T lymphocytes (CTL) are known to play an important role in the control of Mycobacterium…”
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Broadly Immunogenic HLA Class I Supertype-Restricted Elite CTL Epitopes Recognized in a Diverse Population Infected with Different HIV-1 Subtypes by Perez, Carina L, Larsen, Mette V, Gustafsson, Rasmus, Norstrom, Melissa M, Atlas, Ann, Nixon, Douglas F, Nielsen, Morten, Lund, Ole, Karlsson, Annika C

“…The genetic variations of the HIV-1 virus and its human host constitute major obstacles for obtaining potent HIV-1-specific CTL responses in individuals of…”
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Targeting of conserved gag-epitopes in early HIV infection is associated with lower plasma viral load and slower CD4(+) T cell depletion by Perez, Carina L, Milush, Jeffrey M, Buggert, Marcus, Eriksson, Emily M, Larsen, Mette V, Liegler, Teri, Hartogensis, Wendy, Bacchetti, Peter, Lund, Ole, Hecht, Frederick M, Nixon, Douglas F, Karlsson, Annika C

“…We aimed to investigate whether the character of the immunodominant HIV-Gag peptide (variable or conserved) targeted by CD8(+) T cells in early HIV infection…”
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Improving biotech education through gamified laboratory simulations: gamified laboratory simulations motivate students and improve learning outcomes compared with traditional teaching methods by Bonde, Mads T, Makransky, Guido, Wandall, Jakob, Larsen, Mette V, Morsing, Mikkel, Jarmer, Hanne, Sommer, Morten O.A

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Bacteriology in acute exacerbation of chronic obstructive pulmonary disease in patients admitted to hospital by Larsen, Mette V., Janner, Julie H., Nielsen, Susanne D., Friis-Møller, Alice, Ringbaek, Thomas, Lange, Peter

“…We investigated the bacterial flora and antimicrobial sensitivity in sputum from patients admitted to hospital with acute exacerbation of chronic obstructive…”
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HLA Class I Binding 9mer Peptides from Influenza A Virus Induce CD4.sup.+ T Cell Responses by Wang, Mingjun, Larsen, Mette V, Nielsen, Morten, Harndahl, Mikkel, Justesen, Sune, Dziegiel, Morten H, Buus, Søren, Tang, Sheila T, Lund, Ole, Claesson, Mogens H

“…Background Identification of human leukocyte antigen class I (HLA-I) restricted cytotoxic T cell (CTL) epitopes from influenza virus is of importance for the…”
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