Search Results - "Lanoix, Joel"

OpenCustomDB: Integration of Unannotated Open Reading Frames and Genetic Variants to Generate More Comprehensive Customized Protein Databases by Guilloy, Noé, Brunet, Marie A., Leblanc, Sébastien, Jacques, Jean-François, Hardy, Marie-Pierre, Ehx, Grégory, Lanoix, Joël, Thibault, Pierre, Perreault, Claude, Roucou, Xavier

“…Proteomic diversity in biological samples can be characterized by mass spectrometry (MS)-based proteomics using customized protein databases generated from…”
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Comparison of the MHC I Immunopeptidome Repertoire of B‐Cell Lymphoblasts Using Two Isolation Methods by Lanoix, Joël, Durette, Chantal, Courcelles, Mathieu, Cossette, Émilie, Comtois‐Marotte, Simon, Hardy, Marie‐Pierre, Côté, Caroline, Perreault, Claude, Thibault, Pierre

“…Significant technological advances in both affinity chromatography and mass spectrometry have facilitated the identification of peptides associated with the…”
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Breast cancer immunopeptidomes contain numerous shared tumor antigens by Kina, Eralda, Laverdure, Jean-Philippe, Durette, Chantal, Lanoix, Joël, Courcelles, Mathieu, Zhao, Qingchuan, Apavaloaei, Anca, Larouche, Jean-David, Hardy, Marie-Pierre, Vincent, Krystel, Gendron, Patrick, Hesnard, Leslie, Thériault, Catherine, Ruiz Cuevas, Maria Virginia, Ehx, Grégory, Thibault, Pierre, Perreault, Claude

“…Hormone receptor-positive breast cancer (HR+) is immunologically cold and has not benefited from advances in immunotherapy. In contrast, subsets of…”
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Autophagy degrades immunogenic endogenous retroelements induced by 5-azacytidine in acute myeloid leukemia by Noronha, Nandita, Durette, Chantal, Cahuzac, Maxime, E Silva, Bianca, Courtois, Justine, Humeau, Juliette, Sauvat, Allan, Hardy, Marie-Pierre, Vincent, Krystel, Laverdure, Jean-Philippe, Lanoix, Joël, Baron, Frédéric, Thibault, Pierre, Perreault, Claude, Ehx, Gregory

“…The hypomethylating agent 5-azacytidine (AZA) is the first-line treatment for AML patients unfit for intensive chemotherapy. The effect of AZA results in part…”
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Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers by Apavaloaei, Anca, Hesnard, Leslie, Hardy, Marie-Pierre, Benabdallah, Basma, Ehx, Gregory, Thériault, Catherine, Laverdure, Jean-Philippe, Durette, Chantal, Lanoix, Joël, Courcelles, Mathieu, Noronha, Nandita, Chauhan, Kapil Dev, Lemieux, Sébastien, Beauséjour, Christian, Bhatia, Mick, Thibault, Pierre, Perreault, Claude

“…Previous reports showed that mouse vaccination with pluripotent stem cells (PSCs) induces durable anti-tumor immune responses via T cell recognition of some…”
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H3.3 G34W Promotes Growth and Impedes Differentiation of Osteoblast-Like Mesenchymal Progenitors in Giant Cell Tumor of Bone by Khazaei, Sima, De Jay, Nicolas, Deshmukh, Shriya, Hendrikse, Liam D, Jawhar, Wajih, Chen, Carol C L, Mikael, Leonie G, Faury, Damien, Marchione, Dylan M, Lanoix, Joel, Bonneil, Éric, Ishii, Takeaki, Jain, Siddhant U, Rossokhata, Kateryna, Sihota, Tianna S, Eveleigh, Robert, Lisi, Véronique, Harutyunyan, Ashot S, Jung, Sungmi, Karamchandani, Jason, Dickson, Brendan C, Turcotte, Robert, Wunder, Jay S, Thibault, Pierre, Lewis, Peter W, Garcia, Benjamin A, Mack, Stephen C, Taylor, Michael D, Garzia, Livia, Kleinman, Claudia L, Jabado, Nada

“…Glycine 34-to-tryptophan (G34W) substitutions in H3.3 arise in approximately 90% of giant cell tumor of bone (GCT). Here, we show H3.3 G34W is necessary for…”
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Transposable elements regulate thymus development and function by Larouche, Jean-David, Laumont, Céline M, Trofimov, Assya, Vincent, Krystel, Hesnard, Leslie, Brochu, Sylvie, Côté, Caroline, Humeau, Juliette F, Bonneil, Éric, Lanoix, Joel, Durette, Chantal, Gendron, Patrick, Laverdure, Jean-Philippe, Richie, Ellen R, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

“…Transposable elements (TEs) are repetitive sequences representing ~45% of the human and mouse genomes and are highly expressed by medullary thymic epithelial…”
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Cdc42 and Rac1 activity is reduced in human pheochromocytoma and correlates with FARP1 and ARHGEF1 expression by Croisé, Pauline, Houy, Sébastien, Gand, Mathieu, Lanoix, Joël, Calco, Valérie, Tóth, Petra, Brunaud, Laurent, Lomazzi, Sandra, Paramithiotis, Eustache, Chelsky, Daniel, Ory, Stéphane, Gasman, Stéphane

“…Abstract Among small GTPases from the Rho family, Cdc42, Rac, and Rho are well known to mediate a large variety of cellular processes linked with cancer…”
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Proteomic analysis of the transitional endoplasmic reticulum in hepatocellular carcinoma: An organelle perspective on cancer by Roy, Line, LaBoissière, Sylvie, Abdou, Eman, Thibault, Geneviève, Hamel, Nathalie, Taheri, Maryam, Boismenu, Daniel, Lanoix, Joël, Kearney, Robert E., Paiement, Jacques

“…The transitional endoplasmic reticulum (tER) is composed of both rough and smooth ER membranes and thus participates in functions attributed to both these two…”
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Most non-canonical proteins uniquely populate the proteome or immunopeptidome by Ruiz Cuevas, Maria Virginia, Hardy, Marie-Pierre, Hollý, Jaroslav, Bonneil, Éric, Durette, Chantal, Courcelles, Mathieu, Lanoix, Joël, Côté, Caroline, Staudt, Louis M., Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude, Yewdell, Jonathan W.

“…Combining RNA sequencing, ribosome profiling, and mass spectrometry, we elucidate the contribution of non-canonical translation to the proteome and major…”
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Atypical acute myeloid leukemia-specific transcripts generate shared and immunogenic MHC class-I-associated epitopes by Ehx, Grégory, Larouche, Jean-David, Durette, Chantal, Laverdure, Jean-Philippe, Hesnard, Leslie, Vincent, Krystel, Hardy, Marie-Pierre, Thériault, Catherine, Rulleau, Caroline, Lanoix, Joël, Bonneil, Eric, Feghaly, Albert, Apavaloaei, Anca, Noronha, Nandita, Laumont, Céline M., Delisle, Jean-Sébastien, Vago, Luca, Hébert, Josée, Sauvageau, Guy, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

“…Acute myeloid leukemia (AML) has not benefited from innovative immunotherapies, mainly because of the lack of actionable immune targets. Using an original…”
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Taking organelles apart, putting them back together and creating new ones: Lessons from the endoplasmic reticulum by Lavoie, Christine, Roy, Line, Lanoix, Joël, Taheri, Mariam, Young, Robin, Thibault, Geneviève, Farah, Carol Abi, Leclerc, Nicole, Paiement, Jacques

“…The endoplasmic reticulum (ER) is a highly dynamic organelle. It is composed of four subcompartments including nuclear envelope (NE), rough ER (rER), smooth ER…”
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Immunogenicity of Non-Mutated Ovarian Cancer-Specific Antigens by Hesnard, Leslie, Thériault, Catherine, Cahuzac, Maxime, Durette, Chantal, Vincent, Krystel, Hardy, Marie-Pierre, Lanoix, Joël, Lavallée, Gabriel Ouellet, Humeau, Juliette, Thibault, Pierre, Perreault, Claude

“…Epithelial ovarian cancer (EOC) has not significantly benefited from advances in immunotherapy, mainly because of the lack of well-defined actionable antigen…”
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MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets by Kovalchik, Kevin A., Ma, Qing, Wessling, Laura, Saab, Frederic, Duquette, Jérôme D., Kubiniok, Peter, Hamelin, David J., Faridi, Pouya, Li, Chen, Purcell, Anthony W., Jang, Anne, Paramithiotis, Eustache, Tognetti, Marco, Reiter, Lukas, Bruderer, Roland, Lanoix, Joël, Bonneil, Éric, Courcelles, Mathieu, Thibault, Pierre, Caron, Etienne, Sirois, Isabelle

“…MS-based immunopeptidomics is maturing into an automatized and high-throughput technology, producing small- to large-scale datasets of clinically relevant…”
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Dysfunction of calcium-regulated exocytosis at a single-cell level causes catecholamine hypersecretion in patients with pheochromocytoma by Houy, Sébastien, Streit, Laura, Drissa, Inès, Rame, Marion, Decraene, Charles, Moog, Sophie, Brunaud, Laurent, Lanoix, Joël, Chelbi, Rabie, Bihain, Florence, Lacomme, Stéphanie, Lomazzi, Sandra, Campoli, Philippe, Vix, Michel, Mutter, Didier, Paramithiotis, Eustache, Dubessy, Christophe, Vitale, Nicolas, Ory, Stéphane, Gasman, Stéphane

“…Neuroendocrine tumors constitute a heterogeneous group of tumors arising from hormone-secreting cells and are generally associated with a dysfunction of…”
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Isolation of Human Prostatic Epithelial Plasma Membranes for Proteomics Using Mirror Image Tissue Banking of Radical Prostatectomy Specimens by SIRCAR, Kanishka, GABOURY, Louis, MILETTI, Tina, LANOIX, Joel, OUADI, Lydia, MECTEAU, Melanie, SCARLATA, Eleonora, SAAD, Fred, APRIKIAN, Armen, TANGUAY, Simon, LAPOINTE, Steven, LUSSIER, Christian

“…Purpose: To isolate human prostatic epithelial plasma membranes for the identification of cell surface proteins in the therapeutic targeting of cancer cells…”
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Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling by Pfammatter, Sibylle, Bonneil, Eric, Lanoix, Joel, Vincent, Krystel, Hardy, Marie-Pierre, Courcelles, Mathieu, Perreault, Claude, Thibault, Pierre

“…Defining the repertoire of peptides presented by the major histocompatibility complex class I (MHC I) is a key step toward the identification of relevant…”
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Immunopeptidomic Analyses of Colorectal Cancers With and Without Microsatellite Instability by Cleyle, Jenna, Hardy, Marie-Pierre, Minati, Robin, Courcelles, Mathieu, Durette, Chantal, Lanoix, Joel, Laverdure, Jean-Philippe, Vincent, Krystel, Perreault, Claude, Thibault, Pierre

“…Colorectal cancer is the second leading cause of cancer death worldwide, and the incidence of this disease is expected to increase as global socioeconomic…”
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Transposable elements regulate thymus development and function by Larouche, Jean-David, Laumont, Céline M, Trofimov, Assya, Vincent, Krystel, Hesnard, Leslie, Brochu, Sylvie, Côté, Caroline, Humeau, Juliette F, Bonneil, Éric, Lanoix, Joel, Durette, Chantal, Gendron, Patrick, Laverdure, Jean-Philippe, Richie, Ellen R, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

“…Transposable elements (TEs) are repetitive sequences representing ~45% of the human and mouse genomes and are highly expressed by medullary thymic epithelial…”
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Sorting of Golgi Resident Proteins into Different Subpopulations of COPI Vesicles: A Role for ArfGAP1 by Lanoix, Joel, Ouwendijk, Joke, Stark, Annika, Szafer, Edith, Cassel, Dan, Dejgaard, Kurt, Weiss, Matthias, Nilsson, Tommy

“…We present evidence for two subpopulations of coatomer protein I vesicles, both containing high amounts of Golgi resident proteins but only minor amounts of…”
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