Search Results - "LOGARES, RAMIRO"

Decoding populations in the ocean microbiome by Logares, Ramiro

“…Understanding the characteristics and structure of populations is fundamental to comprehending ecosystem processes and evolutionary adaptations. While the…”
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The planktonic protist interactome: where do we stand after a century of research? by Bjorbækmo, Marit F. Markussen, Evenstad, Andreas, Røsæg, Line Lieblein, Krabberød, Anders K., Logares, Ramiro

“…Microbial interactions are crucial for Earth ecosystem function, but our knowledge about them is limited and has so far mainly existed as scattered records…”
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Abundant and rare picoeukaryotic sub‐communities present contrasting patterns in the epipelagic waters of marginal seas in the northwestern Pacific Ocean by Wu, Wenxue, Logares, Ramiro, Huang, Bangqin, Hsieh, Chih‐hao

“…Summary In this work, they compared patterns of abundant and rare picoeukaryotic sub‐communities in the epipelagic waters (surface and 40–75 m depth subsurface…”
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Low shifts in salinity determined assembly processes and network stability of microeukaryotic plankton communities in a subtropical urban reservoir by Mo, Yuanyuan, Peng, Feng, Gao, Xiaofei, Xiao, Peng, Logares, Ramiro, Jeppesen, Erik, Ren, Kexin, Xue, Yuanyuan, Yang, Jun

“…Abstract Background Freshwater salinization may result in significant changes of microbial community composition and diversity, with implications for ecosystem…”
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Important contribution of macroalgae to oceanic carbon sequestration by Ortega, Alejandra, Geraldi, Nathan R., Alam, Intikhab, Kamau, Allan A., Acinas, Silvia G., Logares, Ramiro, Gasol, Josep M., Massana, Ramon, Krause-Jensen, Dorte, Duarte, Carlos M.

“…The role of macroalgae in Blue Carbon assessments has been controversial, partially due to uncertainties about the fate of exported macroalgae. Available…”
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Sinking particles promote vertical connectivity in the ocean microbiome by Mestre, Mireia, Ruiz-González, Clara, Logares, Ramiro, Duarte, Carlos M., Gasol, Josep M., Sala, M. Montserrat

“…The sinking of organic particles formed in the photic layer is a main vector of carbon export into the deep ocean. Although sinking particles are heavily…”
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Marked changes in diversity and relative activity of picoeukaryotes with depth in the world ocean by Giner, Caterina R., Pernice, Massimo C., Balagué, Vanessa, Duarte, Carlos M., Gasol, Josep M., Logares, Ramiro, Massana, Ramon

“…Microbial eukaryotes are key components of the ocean plankton. Yet, our understanding of their community composition and activity in different water layers of…”
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Seasonal niche differentiation among closely related marine bacteria by Auladell, Adrià, Barberán, Albert, Logares, Ramiro, Garcés, Esther, Gasol, Josep M., Ferrera, Isabel

“…Bacteria display dynamic abundance fluctuations over time in marine environments, where they play key biogeochemical roles. Here, we characterized the seasonal…”
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Perspectives from Ten Years of Protist Studies by High‐Throughput Metabarcoding by Santoferrara, Luciana, Burki, Fabien, Filker, Sabine, Logares, Ramiro, Dunthorn, Micah, McManus, George B.

“…During the last decade, high‐throughput metabarcoding became routine for analyzing protistan diversity and distributions in nature. Amid a multitude of…”
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Phylogenetically and functionally diverse microorganisms reside under the Ross Ice Shelf by Martínez-Pérez, Clara, Greening, Chris, Bay, Sean K., Lappan, Rachael J., Zhao, Zihao, De Corte, Daniele, Hulbe, Christina, Ohneiser, Christian, Stevens, Craig, Thomson, Blair, Stepanauskas, Ramunas, González, José M., Logares, Ramiro, Herndl, Gerhard J., Morales, Sergio E., Baltar, Federico

“…Throughout coastal Antarctica, ice shelves separate oceanic waters from sunlight by hundreds of meters of ice. Historical studies have detected activity of…”
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Environmental Sequencing Provides Reasonable Estimates of the Relative Abundance of Specific Picoeukaryotes by Giner, Caterina R, Forn, Irene, Romac, Sarah, Logares, Ramiro, de Vargas, Colomban, Massana, Ramon

“…High-throughput sequencing (HTS) is revolutionizing environmental surveys of microbial diversity in the three domains of life by providing detailed information…”
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities by Acinas, Silvia G., Sánchez, Pablo, Salazar, Guillem, Cornejo-Castillo, Francisco M., Sebastián, Marta, Logares, Ramiro, Royo-Llonch, Marta, Paoli, Lucas, Sunagawa, Shinichi, Hingamp, Pascal, Ogata, Hiroyuki, Lima-Mendez, Gipsi, Roux, Simon, González, José M., Arrieta, Jesús M., Alam, Intikhab S., Kamau, Allan, Bowler, Chris, Raes, Jeroen, Pesant, Stéphane, Bork, Peer, Agustí, Susana, Gojobori, Takashi, Vaqué, Dolors, Sullivan, Matthew B., Pedrós-Alió, Carlos, Massana, Ramon, Duarte, Carlos M., Gasol, Josep M.

“…The deep sea, the largest ocean’s compartment, drives planetary-scale biogeochemical cycling. Yet, the functional exploration of its microbial communities lags…”
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A global overview of the trophic structure within microbiomes across ecosystems by Xiong, Wu, Jousset, Alexandre, Li, Rong, Delgado-Baquerizo, Manuel, Bahram, Mohammad, Logares, Ramiro, Wilden, Benjamin, de Groot, Gerard Arjen, Amacker, Nathalie, Kowalchuk, George A., Shen, Qirong, Geisen, Stefan

“…•We investigated paired bacteria and protists across ecosystems at the global scale.•Predatory protists dominated in soils, phototrophs dominated in aquatic…”
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Biogeography of bacterial communities exposed to progressive long-term environmental change by Logares, Ramiro, Lindström, Eva S, Langenheder, Silke, Logue, Jürg B, Paterson, Harriet, Laybourn-Parry, Johanna, Rengefors, Karin, Tranvik, Lars, Bertilsson, Stefan

“…The response of microbial communities to long-term environmental change is poorly understood. Here, we study bacterioplankton communities in a unique system of…”
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Patterns of Rare and Abundant Marine Microbial Eukaryotes by Logares, Ramiro, Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Dolan, John R., Dunthorn, Micah, Edvardsen, Bente, Gobet, Angélique, Kooistra, Wiebe H.C.F., Mahé, Frédéric, Not, Fabrice, Ogata, Hiroyuki, Pawlowski, Jan, Pernice, Massimo C., Romac, Sarah, Shalchian-Tabrizi, Kamran, Simon, Nathalie, Stoeck, Thorsten, Santini, Sébastien, Siano, Raffaele, Wincker, Patrick, Zingone, Adriana, Richards, Thomas A., de Vargas, Colomban, Massana, Ramon

“…Biological communities are normally composed of a few abundant and many rare species. This pattern is particularly prominent in microbial communities, in which…”
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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing by Massana, Ramon, Gobet, Angélique, Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Chambouvet, Aurélie, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Dolan, John R., Dunthorn, Micah, Edvardsen, Bente, Forn, Irene, Forster, Dominik, Guillou, Laure, Jaillon, Olivier, Kooistra, Wiebe H. C. F., Logares, Ramiro, Mahé, Frédéric, Not, Fabrice, Ogata, Hiroyuki, Pawlowski, Jan, Pernice, Massimo C., Probert, Ian, Romac, Sarah, Richards, Thomas, Santini, Sébastien, Shalchian-Tabrizi, Kamran, Siano, Raffaele, Simon, Nathalie, Stoeck, Thorsten, Vaulot, Daniel, Zingone, Adriana, de Vargas, Colomban

“…Summary Although protists are critical components of marine ecosystems, they are still poorly characterized. Here we analysed the taxonomic diversity of…”
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Comparative genomics reveals new functional insights in uncultured MAST species by Labarre, Aurelie, López-Escardó, David, Latorre, Francisco, Leonard, Guy, Bucchini, François, Obiol, Aleix, Cruaud, Corinne, Sieracki, Michael E., Jaillon, Olivier, Wincker, Patrick, Vandepoele, Klaas, Logares, Ramiro, Massana, Ramon

“…Heterotrophic lineages of stramenopiles exhibit enormous diversity in morphology, lifestyle, and habitat. Among them, the marine stramenopiles (MASTs)…”
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Protist Diversity and Seasonal Dynamics in Skagerrak Plankton Communities as Revealed by Metabarcoding and Microscopy by Gran‐Stadniczeñko, Sandra, Egge, Elianne, Hostyeva, Vladyslava, Logares, Ramiro, Eikrem, Wenche, Edvardsen, Bente

“…Protist community composition and seasonal dynamics are of major importance for the production of higher trophic levels, such as zooplankton and fish. Our aim…”
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Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans by Pernice, Massimo C, Giner, Caterina R, Logares, Ramiro, Perera-Bel, Júlia, Acinas, Silvia G, Duarte, Carlos M, Gasol, Josep M, Massana, Ramon

“…In this work, we study the diversity of bathypelagic microbial eukaryotes (0.8–20 μm) in the global ocean. Seawater samples from 3000 to 4000 m depth from 27…”
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A fungi hotspot deep in the ocean: explaining the presence of Gjaerumia minor in equatorial Pacific bathypelagic waters by Pernice, Massimo C., Forn, Irene, Logares, Ramiro, Massana, Ramon

“…A plant parasite associated with the white haze disease in apples, the Basidiomycota Gjaerumia minor, has been found in most samples of the global bathypelagic…”
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