Search Results - "Kyndt, John A."

Illumina Short-Read Sequencing of the Mitogenomes of Novel Scarites subterraneus Isolates Allows for Taxonomic Refinement of the Genus Scarites Fabricius 1775, within the Carabidae Family by Kyndt, Elliot C, Kyndt, John A

“…We sequenced the complete mitogenomes, 18S and 28S rRNA of two new isolates, collected in Eastern Nebraska and Northern Arkansas (US). Based on molecular…”
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Genomic Comparison, Phylogeny and Taxonomic Reevaluation of the Ectothiorhodospiraceae and Description of Halorhodospiraceae fam. nov. and Halochlorospira gen. nov by Imhoff, Johannes F, Kyndt, John A, Meyer, Terrance E

“…The family represents purple sulfur bacteria of the found primarily in alkaline soda lakes of moderate to extremely high salinity. The main microscopically…”
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The Eastern Nebraska Salt Marsh Microbiome Is Well Adapted to an Alkaline and Extreme Saline Environment by Athen, Sierra R., Dubey, Shivangi, Kyndt, John A.

“…The Eastern Nebraska Salt Marshes contain a unique, alkaline, and saline wetland area that is a remnant of prehistoric oceans that once covered this area. The…”
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Comparison of Auxenochlorella protothecoides and Chlorella spp. Chloroplast Genomes: Evidence for Endosymbiosis and Horizontal Virus-like Gene Transfer by Park, Sang-Hyuck, Kyndt, John A, Brown, Judith K

“…Resequencing of the chloroplast genome (cpDNA) of UTEX 25 was completed (GenBank Accession no. KC631634.1), revealing a genome size of 84,576 base pairs and…”
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Genomic and Phylogenetic Characterization of Rhodopseudomonas infernalis sp. nov., Isolated from the Hell Creek Watershed (Nebraska) by Humphrey, Christine E., Burnett, Nicole, Dubey, Shivangi, Kyndt, John A.

“…The genus Rhodopseudomonas is known for its versatile metabolic capabilities and has been proposed to be used in a wide variety of innovative applications,…”
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Ectothiorhodospira lacustris sp. nov., a New Purple Sulfur Bacterium from Low-Mineralized Soda Lakes That Contains a Unique Pathway for Nitric Oxide Reduction by Bryantseva, Irina A, Kyndt, John A, Gorlenko, Vladimir M, Imhoff, Johannes F

“…Several strains of a Gram-negative, anaerobic photoautotrophic, motile, rod-shaped bacterium, designated as B14B, A-7R, and A-7Y were isolated from biofilms of…”
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Genome Sequence and Characterization of a Xanthorhodopsin-Containing, Aerobic Anoxygenic Phototrophic Rhodobacter Species, Isolated from Mesophilic Conditions at Yellowstone National Park by Kyndt, John A., Robertson, Sydney, Shoffstall, Isabella B., Ramaley, Robert F., Meyer, Terrance E.

“…The genus Rhodobacter consists of purple nonsulfur photosynthetic alphaproteobacteria known for their diverse metabolic capabilities. Here, we report the…”
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Using the Gut Microbiome to Assess Stocking Efforts of the Endangered Pallid Sturgeon, Scaphirhynchus albus by Gaughan, Sarah, Kyndt, John A, Haas, Justin D, Steffensen, Kirk D, Kočovský, Patrick M, Pope, Kevin L

“…The endangered Pallid Sturgeon, , has been actively managed to prevent population declines, including stocking of hatchery-raised fish. The gut microbiome…”
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Simultaneous Genome Sequencing of Prosthecochloris ethylica and Desulfuromonas acetoxidans within a Syntrophic Mixture Reveals Unique Pili and Protein Interactions by Kyndt, John A, Van Beeumen, Jozef J, Meyer, Terry E

“…Strains of , 2-K, N2, and N3 are known to be composed of a syntrophic mixture of a green sulfur bacterium and a sulfur-reducing colorless component. Upon…”
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Comparative Genome Analysis of the Photosynthetic Betaproteobacteria of the Genus Rhodocyclus : Heterogeneity within Strains Assigned to Rhodocyclus tenuis and Description of Rhodocyclus gracilis sp. nov. as a New Species by Kyndt, John A, Aviles, Fabiola A, Imhoff, Johannes F, Künzel, Sven, Neulinger, Sven C, Meyer, Terrance E

“…The genome sequences for DSM 168 and four strains assigned to (DSM 110, DSM 111, DSM 112, and IM 230) have been determined. One of the strains studied (IM 230)…”
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Whole-Genome Sequence of the Novel Rubrobacter taiwanensis Strain Yellowstone, Isolated from Yellowstone National Park by Freed, Jr, Shawn, Ramaley, Robert F, Kyndt, John A

“…The family is often represented by its thermophilic and radiotolerant species. and have been extensively studied, contributing to defining the characteristics…”
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Salinarimonas chemoclinalis, an Aerobic Anoxygenic Phototroph Isolated from a Saline, Sulfate-Rich Meromictic Lake by Messner, Katia, Kyndt, John A., Yurkov, Vladimir

“…A pink-pigmented, ovoid-rod-shaped, Gram-negative bacterial strain ML10T was previously isolated in a study of a meromictic lake in British Columbia, Canada…”
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Cellulosimicrobium fucosivorans sp. nov., isolated from San Elijo Lagoon, contains a fucose metabolic pathway linked to carotenoid production by Aviles, Fabiola A., Kyndt, John A.

“…Cellulosimicrobium strain SE3 T was isolated from the San Elijo coastal lagoon near San Diego. A whole genome-based phylogenetic comparison shows great…”
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Prosthecate aerobic anoxygenic phototrophs Photocaulis sulfatitolerans gen. nov. sp. nov. and Photocaulis rubescens sp. nov. isolated from alpine meromictic lakes in British Columbia, Canada by Kuzyk, Steven B., Jafri, Murtaza, Humphrey, Elaine, Maltman, Chris, Kyndt, John A., Yurkov, Vladimir

“…Seven Gram-negative flagellated and subsequent prosthecate bacteria were isolated from meromictic Mahoney Lake and Blue Lake in British Columbia, Canada. Each…”
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Bacterial Diversity of Water and Sediment Samples from Gull Point State Park (West Okoboji, Iowa) Determined Using 16S rRNA Gene Amplicon Sequencing by Kyndt, John A

“…Gull Point State Park is located on a peninsula on the west shore of West Okoboji Lake (Iowa, USA). It is the primary state park in the Iowa Great Lakes…”
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Regulation of the Ppr Histidine Kinase by Light-Induced Interactions between Its Photoactive Yellow Protein and Bacteriophytochrome Domains by Kyndt, John A, Fitch, John C, Seibeck, Sven, Borucki, Berthold, Heyn, Maarten P, Meyer, Terry E, Cusanovich, Michael A

“…Ppr is a unique bacteriophytochrome that bleaches rather than forming a far-red-shifted Pfr state upon red light activation. Ppr is also unusual in that it has…”
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The genome sequence of the giant phototrophic gammaproteobacterium Thiospirillum jenense gives insight into its physiological properties and phylogenetic relationships by Imhoff, Johannes F., Meyer, Terrance E., Kyndt, John A.

“…In a conserved culture of the purple sulfur bacterium Thiospirillum jenense DSM216 T , cells of this species were easily recognized by cell morphology,…”
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Phylogenetic relationship of phototrophic heliobacteria and systematic reconsideration of species and genus assignments based on genome sequences of eight species by Kyndt, John A, Montano Salama, Dayana, Meyer, Terrance E, Imhoff, Johannes F

“…The draft genome sequences of five species of named phototrophic heliobacteria in the order were determined. Whole genome phylogenetic and average nucleotide…”
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Photoactive yellow protein, bacteriophytochrome, and sensory rhodopsin in purple phototrophic bacteria by Kyndt, John A, Meyer, Terry E, Cusanovich, Michael A

“…The purple photosynthetic bacteria contain a large variety of sensory and regulatory proteins, and those responding to light are among the most interesting…”
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Brevundimonas aurifodinae, sp. nov., an Aerobic Anoxygenic Phototroph Resistant to Metalloid Oxyanions Isolated from Gold Mine Tailings by Maltman, Chris, Messner, Katia, Kyndt, John A., Yurkov, Vladimir

“…A polyphasic taxonomic study was carried out on the rod-shaped, orange-pigmented strain C11T, isolated from gold mine tailings. Sequencing of the 16S rRNA gene…”
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