Search Results - "Kuiper, Emily G."
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The RNA exosome and RNA exosome-linked disease
Published in RNA (Cambridge) (01-02-2018)“…The RNA exosome is an evolutionarily conserved, ribonuclease complex that is critical for both processing and degradation of a variety of RNAs. Cofactors that…”
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2
Conserved sequence-specific lincRNA–steroid receptor interactions drive transcriptional repression and direct cell fate
Published in Nature communications (07-11-2014)“…The majority of the eukaryotic genome is transcribed, generating a significant number of long intergenic noncoding RNAs (lincRNAs). Although lincRNAs represent…”
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3
Functional heterologous protein expression by genetically engineered probiotic yeast Saccharomyces boulardii
Published in PloS one (12-11-2014)“…Recent studies have suggested the potential of probiotic organisms to be adapted for the synthesis and delivery of oral therapeutics. The probiotic yeast…”
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4
50S subunit recognition and modification by the Mycobacterium tuberculosis ribosomal RNA methyltransferase TlyA
Published in Proceedings of the National Academy of Sciences - PNAS (05-04-2022)“…Changes in bacterial ribosomal RNA (rRNA) methylation status can alter the activity of diverse groups of ribosome-targeting antibiotics. These modifications…”
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tRNA m1G9 modification depends on substrate-specific RNA conformational changes induced by the methyltransferase Trm10
Published in The Journal of biological chemistry (01-12-2023)“…The methyltransferase Trm10 modifies a subset of tRNAs on the base N1 position of the ninth nucleotide in the tRNA core. Trm10 is conserved throughout Eukarya…”
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6
A Novel Motif for S-Adenosyl-l-methionine Binding by the Ribosomal RNA Methyltransferase TlyA from Mycobacterium tuberculosis
Published in The Journal of biological chemistry (03-02-2017)“…Capreomycin is a potent ribosome-targeting antibiotic that is an essential component of current antituberculosis treatments, particularly in the case of…”
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Substrate recognition by the Pseudomonas aeruginosa EF-Tu–modifying methyltransferase EftM
Published in The Journal of biological chemistry (27-12-2019)“…The opportunistic bacterial pathogen Pseudomonas aeruginosa is a leading cause of serious infections in individuals with cystic fibrosis, compromised immune…”
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Binding Induced RNA Conformational Changes Control Substrate Recognition and Catalysis by the Thiostrepton Resistance Methyltransferase (Tsr)
Published in The Journal of biological chemistry (19-09-2014)“…Ribosomal RNA (rRNA) post-transcriptional modifications are essential for ribosome maturation, translational fidelity, and are one mechanism used by both…”
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The RNA Exosome and Human Disease
Published in Methods in molecular biology (Clifton, N.J.) (2020)“…The evolutionarily conserved RNA exosome is a multisubunit ribonuclease complex that processes and/or degrades numerous RNAs. Recently, mutations in genes…”
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10
Trimethylation of Elongation Factor-Tu by the Dual Thermoregulated Methyltransferase EftM Does Not Impact Its Canonical Function in Translation
Published in Scientific reports (05-03-2019)“…The Pseudomonas aeruginosa methyltransferase EftM trimethylates elongation factor-Tu (EF-Tu) on lysine 5 to form a post-translational modification important…”
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Pseudomonas aeruginosa EftM Is a Thermoregulated Methyltransferase
Published in The Journal of biological chemistry (12-02-2016)“…Pseudomonas aeruginosa is a Gram-negative opportunistic pathogen that trimethylates elongation factor-thermo-unstable (EF-Tu) on lysine 5. Lysine 5 methylation…”
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Functional roles in S-adenosyl-l-methionine binding and catalysis for active site residues of the thiostrepton resistance methyltransferase
Published in FEBS letters (24-10-2015)“…•Tsr exhibits equivalent SAM binding at two structurally non-equivalent sites.•An arginine residue is implicated in the Tsr catalytic mechanism.•A central…”
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Identification of SUMO modification sites in the base excision repair protein, Ntg1
Published in DNA repair (01-12-2016)“…•Base excision repair (BER) proteins can be modified by SUMO.•Both S. cerevisiae Ntg1 and human NTHL1 can be sumoylated.•Five lysines are identified as the…”
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Molecular regulation of lysine trimethylation by the P. aeruginosa methyltransferase EftM
Published in The FASEB journal (01-04-2019)“…Pseudomonas aeruginosa is an opportunistic pathogen and a leading cause of severe life‐threatening lung and other infections in individuals with cystic…”
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Abstract 1531: A bispecific chimeric-antigen receptor T-cell factory for triple-negative breast cancer
Published in Cancer research (Chicago, Ill.) (01-07-2018)“…Abstract Triple-negative breast cancer (TNBC) is a highly aggressive subtype of breast cancer with poor clinical prognosis. While treated with chemotherapies,…”
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16
tRNA m 1 G9 modification depends on substrate-specific RNA conformational changes induced by the methyltransferase Trm10
Published in The Journal of biological chemistry (01-12-2023)“…The methyltransferase Trm10 modifies a subset of tRNAs on the base N1 position of the ninth nucleotide in the tRNA core. Trm10 is conserved throughout Eukarya…”
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17
Functional roles inS‐adenosyl‐l‐methionine binding and catalysis for active site residues of the thiostrepton resistance methyltransferase
Published in FEBS letters (24-10-2015)“…Resistance to the antibiotic thiostrepton, in producingStreptomycetes, is conferred by theS‐adenosyl‐l‐methionine (SAM)‐dependent SPOUT methyltransferase Tsr…”
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Functional Heterologous Protein Expression by Genetically Engineered Probiotic Yeast Saccharomyces boulardii: e112660
Published in PloS one (01-01-2014)“…Recent studies have suggested the potential of probiotic organisms to be adapted for the synthesis and delivery of oral therapeutics. The probiotic yeast…”
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