Search Results - "Kuchta, Miroslav"
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Investigating molecular transport in the human brain from MRI with physics-informed neural networks
Published in Scientific reports (14-09-2022)“…In recent years, a plethora of methods combining neural networks and partial differential equations have been developed. A widely known example are…”
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2
Sleep cycle-dependent vascular dynamics in male mice and the predicted effects on perivascular cerebrospinal fluid flow and solute transport
Published in Nature communications (20-02-2023)“…Perivascular spaces are important highways for fluid and solute transport in the brain enabling efficient waste clearance during sleep. However, the underlying…”
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A Cell-Based Framework for Numerical Modeling of Electrical Conduction in Cardiac Tissue
Published in Frontiers in physics (10-10-2017)“…In this paper, we study a mathematical model of cardiac tissue based on explicit representation of individual cells. In this EMI model, the extracellular (E)…”
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4
A numerical investigation of intrathecal isobaric drug dispersion within the cervical subarachnoid space
Published in PloS one (15-03-2017)“…Intrathecal drug and gene vector delivery is a procedure to release a solute within the cerebrospinal fluid. This procedure is currently used in clinical…”
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Hybrid FEM-NN models: Combining artificial neural networks with the finite element method
Published in Journal of computational physics (01-12-2021)“…•An approach for training neural networks combined with partial differential equations.•Combines a finite element framework with a machine learning…”
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Learning mesh motion techniques with application to fluid–structure interaction
Published in Computer methods in applied mechanics and engineering (01-05-2024)“…Mesh degeneration is a bottleneck for fluid–structure interaction (FSI) simulations and for shape optimization via the method of mappings. In both cases, an…”
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Directional flow in perivascular networks: mixed finite elements for reduced-dimensional models on graphs
Published in Journal of mathematical biology (01-12-2024)“…Flow of cerebrospinal fluid through perivascular pathways in and around the brain may play a crucial role in brain metabolite clearance. While the driving…”
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8
Robust preconditioning for coupled Stokes–Darcy problems with the Darcy problem in primal form
Published in Computers & mathematics with applications (1987) (01-06-2021)“…The coupled Darcy–Stokes problem is widely used for modeling fluid transport in physical systems consisting of a porous part and a free part. In this work we…”
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9
Parameter-robust methods for the Biot–Stokes interfacial coupling without Lagrange multipliers
Published in Journal of computational physics (15-10-2022)“…In this paper we advance the analysis of discretizations for a fluid-structure interaction model of the monolithic coupling between the free flow of a viscous…”
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10
Preconditioning trace coupled 3 d ‐1 d systems using fractional Laplacian
Published in Numerical methods for partial differential equations (01-01-2019)“…Multiscale or multiphysics problems often involve coupling of partial differential equations posed on domains of different dimensionality. In this work, we…”
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11
Experiments on air entrainment produced by a circular free falling jet
Published in International journal of multiphase flow (01-11-2020)“…•Use steepness to describe the jet disturbances.•Analysis of individual amplitude and wavelength of all the disturbances presented.•Simple setup to create a…”
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12
Preconditioning trace coupled 3d‐1d systems using fractional Laplacian
Published in Numerical methods for partial differential equations (01-01-2019)“…Multiscale or multiphysics problems often involve coupling of partial differential equations posed on domains of different dimensionality. In this work, we…”
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13
Robust Approximation of Generalized Biot-Brinkman Problems
Published in Journal of scientific computing (01-12-2022)“…The generalized Biot-Brinkman equations describe the displacement, pressures and fluxes in an elastic medium permeated by multiple viscous fluid networks and…”
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14
On the singular Neumann problem in linear elasticity
Published in Numerical linear algebra with applications (01-01-2019)“…Summary The Neumann problem of linear elasticity is singular with a kernel formed by the rigid motions of the body. There are several tricks that are commonly…”
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15
An observation on the uniform preconditioners for the mixed Darcy problem
Published in Numerical methods for partial differential equations (01-11-2020)“…When solving a multiphysics problem one often decomposes a monolithic system into simpler, frequently single‐physics, subproblems. A comprehensive solution…”
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Domain decomposition solvers for operators with fractional interface perturbations
Published 28-11-2022“…Operators with fractional perturbations are crucial components for robust preconditioning of interface-coupled multiphysics systems. However, in case the…”
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17
A cell-based framework for modeling cardiac mechanics
Published in Biomechanics and modeling in mechanobiology (01-04-2023)“…Cardiomyocytes are the functional building blocks of the heart—yet most models developed to simulate cardiac mechanics do not represent the individual cells…”
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18
How does the presence of neural probes affect extracellular potentials?
Published in Journal of neural engineering (01-04-2019)“…Mechanistic modeling of neurons is an essential component of computational neuroscience that enables scientists to simulate, explain, and explore neural…”
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Encoder–decoder neural networks for predicting future FTIR spectra – application to enzymatic protein hydrolysis
Published in Journal of biophotonics (01-09-2022)“…In the process of converting food‐processing by‐products to value‐added ingredients, fine grained control of the raw materials, enzymes and process conditions…”
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20
Assembly of multiscale linear PDE operators
Published 19-12-2019“…In numerous applications the mathematical model consists of different processes coupled across a lower dimensional manifold. Due to the multiscale coupling,…”
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