Search Results - "Krishna, Sandeep"

On chaotic dynamics in transcription factors and the associated effects in differential gene regulation by Heltberg, Mathias L., Krishna, Sandeep, Jensen, Mogens H.

“…The control of proteins by a transcription factor with periodically varying concentration exhibits intriguing dynamical behaviour. Even though it is accepted…”
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Coexistence of phage and bacteria on the boundary of self-organized refuges by Heilmann, Silja, Sneppen, Kim, Krishna, Sandeep

“…Bacteriophage are voracious predators of bacteria and a major determinant in shaping bacterial life strategies. Many phage species are virulent, meaning that…”
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Optimizing testing for COVID-19 in India by Cherian, Philip, Krishna, Sandeep, Menon, Gautam I

“…COVID-19 testing across India uses a mix of two types of tests. Rapid Antigen Tests (RATs) are relatively inexpensive point-of-care lateral-flow-assay tests,…”
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Roles of network topology in the relaxation dynamics of simple chemical reaction network models by Himeoka, Yusuke, Kirkegaard, Julius B., Mitarai, Namiko, Krishna, Sandeep

“…Understanding the relationship between the structure of chemical reaction networks and their reaction dynamics is essential for unveiling the design principles…”
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Detection of cooperatively bound transcription factor pairs using ChIP-seq peak intensities and expectation maximization by Datta, Vishaka, Siddharthan, Rahul, Krishna, Sandeep

“…Transcription factors (TFs) often work cooperatively, where the binding of one TF to DNA enhances the binding affinity of a second TF to a nearby location…”
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Metabolic constraints drive self-organization of specialized cell groups by Varahan, Sriram, Walvekar, Adhish, Sinha, Vaibhhav, Krishna, Sandeep, Laxman, Sunil

“…How phenotypically distinct states in isogenic cell populations appear and stably co-exist remains unresolved. We find that within a mature, clonal yeast…”
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Economic and Humanistic Burden of Rheumatoid Arthritis: Results From the US National Survey Data 2018–2020 by Huang, Yinan, Li, Jieni, Agarwal, Sandeep Krishna

“…Objective Our objective was to estimate the economic and humanistic burden among US adults with rheumatoid arthritis (RA). Methods This study analyzed results…”
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Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community by Varahan, Sriram, Sinha, Vaibhhav, Walvekar, Adhish, Krishna, Sandeep, Laxman, Sunil

“…Previously, we found that in glucose-limited colonies, metabolic constraints drive cells into groups exhibiting gluconeogenic or glycolytic states. In that…”
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Defence versus growth in a hostile world: lessons from phage and bacteria by Eriksen, Rasmus Skytte, Krishna, Sandeep

“…Bacterial communities are often highly diverse with several closely related species (or strains) coexisting together. These bacteria compete for resources and…”
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Simplified models of biological networks by Sneppen, Kim, Krishna, Sandeep, Semsey, Szabolcs

“…The function of living cells is controlled by complex regulatory networks that are built of a wide diversity of interacting molecular components. The sheer…”
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Correction: Metabolic constraints drive self-organization of specialized cell groups by Varahan, Sriram, Walvekar, Adhish, Sinha, Vaibhhav, Krishna, Sandeep, Laxman, Sunil

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Minimal Model of Spiky Oscillations in NF-κB Signaling by Krishna, Sandeep, Jensen, Mogens H., Sneppen, Kim

“…The NF-κB signaling system is involved in a variety of cellular processes including immune response, inflammation, and apoptosis. Recent experiments have found…”
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In silico Evolution of Lysis-Lysogeny Strategies Reproduces Observed Lysogeny Propensities in Temperate Bacteriophages by Sinha, Vaibhhav, Goyal, Akshit, Svenningsen, Sine L, Semsey, Szabolcs, Krishna, Sandeep

“…Bacteriophages are the most abundant organisms on the planet and both lytic and temperate phages play key roles as shapers of ecosystems and drivers of…”
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Self-Reproduction and Darwinian Evolution in Autocatalytic Chemical Reaction Systems by Ameta, Sandeep, Matsubara, Yoshiya J, Chakraborty, Nayan, Krishna, Sandeep, Thutupalli, Shashi

“…Understanding the emergence of life from (primitive) abiotic components has arguably been one of the deepest and yet one of the most elusive scientific…”
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Learning Reactive Power Control Polices in Distribution Networks Using Conditional Value-at-Risk and Artificial Neural Networks by Krishna Sandeep Ayyagari, Reynaldo Gonzalez, Yufang Jin, Miltiadis Alamaniotis, Sara Ahmed, Nikolaos Gatsis

“…Scalable coordination of photovoltaic (PV) inverters, considering the uncertainty in PV and load in distribution networks (DNs), is challenging due to the lack…”
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Oscillation patterns in negative feedback loops by Pigolotti, Simone, Krishna, Sandeep, Jensen, Mogens H

“…Organisms are equipped with regulatory systems that display a variety of dynamical behavior ranging from simple stable steady states, to switching and…”
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Toolbox model of evolution of prokaryotic metabolic networks and their regulation by Maslov, Sergei, Krishna, Sandeep, Pang, Tin Yau, Sneppen, Kim

“…It has been reported that the number of transcription factors encoded in prokaryotic genomes scales approximately quadratically with their total number of…”
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Correction: Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community by Varahan, Sriram, Sinha, Vaibhhav, Walvekar, Adhish, Krishna, Sandeep, Laxman, Sunil

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A model for the emergence of cooperation, interdependence, and structure in evolving networks by Jain, Sanjay, Krishna, Sandeep

“…Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical…”
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Telemedicine for Patients with Systemic Lupus Erythematosus in a Publicly Funded Hospital System: A Retrospective Study by Bruera, Sebastian, Staggers, Kristen Andrews, Suarez-Almazor, Maria Eugenia, Agarwal, Sandeep Krishna

“…Systemic lupus erythematosus (SLE) is a chronic autoimmune disease that requires frequent clinic and laboratory visits. However, patients with SLE,…”
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