Search Results - "Krasnobaeva, L A"
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A new approach to studies of non-linear dynamics of kinks activated in inhomogeneous polynucleotide chains
Published in International journal of non-linear mechanics (01-12-2008)“…A new approach has been proposed to study the non-linear dynamics of local conformational distortions (kinks) activated in DNA polynucleotide chains that are…”
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2
Rotational dynamics of bases in the gene coding interferon alpha 17 (IFNA17)
Published in Journal of bioinformatics and computational biology (01-02-2015)“…In the present work, rotational oscillations of nitrogenous bases in the DNA with the sequence of the gene coding interferon alpha 17 (IFNA17), are…”
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3
Forced oscillations of DNA bases
Published in Biophysics (Oxford) (01-03-2016)“…This paper presents the results of a study of forced angular oscillations of DNA bases using a mathematical model that consists of two coupled nonlinear…”
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4
Dynamics of kinks activated in the genes ADRB2, NOS1 and IL-5
Published in Kompʹûternye issledovaniâ i modelirovanie (Online) (01-06-2012)“…In this paper the method of concentrations is applied to the human genome. The dynamical characteristics of three different genes (ADRB2, NOS1, IL-5) with the…”
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5
Influence of diffusion and convection on the chemostat dynamics
Published in Kompʹûternye issledovaniâ i modelirovanie (Online) (01-03-2012)“…Population dynamics is considered in a modified chemostat model including diffusion, chemotaxis, and nonlocal competitive losses. To account for influence of…”
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6
The Dynamic and Statistical Properties of DNA Kinks
Published in Biophysics (Oxford) (2020)“…—Conformational mobility is one of the most important properties of the DNA molecule. A striking example of this mobility is provided by the formation of…”
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7
Effects of dissipation and external fields on the dynamics of conformational distortions in DNA
Published in Biofizika (01-03-2007)“…The dynamics of conformational distortions in DNA has been studied in the framework of the simple mathematical model based on the sine-Gordon equation with two…”
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8
Kink motion by ac external force and dissipation
Published in Kompʹûternye issledovaniâ i modelirovanie (Online) (01-09-2009)“…We consider SG-kink motion under the ac external force and dissipation assuming that kink shape conserves, and the kink velocity is changing in time. External…”
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9
Kink dynamics in the medium with a random force and dissipation in the sine-Gordon model
Published in Russian physics journal (01-02-2008)“…Within the formalism of the Fokker-Planck equation, the influence of nonstationary external force, random force, and dissipation effects on the kink dynamics…”
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10
Analytical Approaches to Investigating the Dynamics of Genes with a Single Coding Region
Published in Biophysics (Oxford) (2018)“…The question of how the heterogeneity of DNA, such as the presence of functionally important sites (promoters, terminators, and coding regions) in its…”
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11
Peculiar features of kink dynamics in inhomogeneous DNA
Published in Biophysics (Oxford) (01-02-2008)“…A mathematical model was constructed for studies of the peculiar features of the dynamics of local conformational distortions (kinks) in inhomogeneous DNA…”
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12
Influence of dissipation and external field on the dynamics of local deformations in DNA
Published in Biophysics (Oxford) (01-04-2007)“…The dynamics of local deformations in DNA is studied in a simple mathematical model based on the sine-Gordon equation with two additional terms, one accounting…”
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13
Forced Oscillations of DNA Bases
Published in Biofizika (01-03-2016)“…This paper presents the results of the studying of forced angular oscillations of the DNA bases with the help of the mathematical model consisting of two…”
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14
One- and two-soliton solutions for DNA
Published in Biofizika (01-05-2005)“…One- and two-soliton solutions of the nonlinear differential equation imitating rotational oscillations of DNA bases were found. It was shown that the equation…”
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15
Modulation of the velocity of soliton-like perturbations for the sine–Gordon equation with external force and dissipation
Published in Russian physics journal (01-12-2009)“…An analytical expression of the function modulating the amplitude of soliton velocity perturbations for the sine-Gordon equation with a uniform external…”
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16
Kink velocity in nonstationary external fields for the sine-Gordon model with allowance for dissipation effects
Published in Russian physics journal (2008)“…With the help of energy analysis suggested by McLaughlin and Scott for the sine-Gordon equation, evolution of kink velocity modeling the propagation of a local…”
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17
Kink dynamics in inhomogeneous DNA
Published in Biofizika (01-01-2008)“…A mathematical model for studies of peculiar features of the dynamics of local conformational distortions (kinks) has been constructed. General formulas…”
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