Search Results - "Kramer, Susanne"

The ApaH-like phosphatase TbALPH1 is the major mRNA decapping enzyme of trypanosomes by Kramer, Susanne

“…5'-3' decay is the major mRNA decay pathway in many eukaryotes, including trypanosomes. After deadenylation, mRNAs are decapped by the nudix hydrolase DCP2 of…”
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Developmental regulation of gene expression in the absence of transcriptional control: The case of kinetoplastids by Kramer, Susanne

“…[Display omitted] ► Kinetoplastids do not regulate transcription. ► Yet, gene expression changes severely during life cycle progression. ► At what levels does…”
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Temporal variation in surface and subsoil abundance and function of the soil microbial community in an arable soil by Kramer, Susanne, Marhan, Sven, Haslwimmer, Heike, Ruess, Liliane, Kandeler, Ellen

“…Many studies of the microbial ecology of agricultural ecosystems focus on surface soils, whereas the impacts of management practice and season on soil…”
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Trans -acting proteins regulating mRNA maturation, stability and translation in trypanosomatids by Kramer, Susanne, Carrington, Mark

“…In trypanosomatids, alterations in gene expression in response to intrinsic or extrinsic signals are achieved through post-transcriptional mechanisms. In the…”
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The nuclear proteome of Trypanosoma brucei by Goos, Carina, Dejung, Mario, Janzen, Christian J, Butter, Falk, Kramer, Susanne

“…Trypanosoma brucei is a protozoan flagellate that is transmitted by tsetse flies into the mammalian bloodstream. The parasite has a huge impact on human health…”
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Resource Partitioning between Bacteria, Fungi, and Protists in the Detritusphere of an Agricultural Soil by Kramer, Susanne, Dibbern, Dörte, Moll, Julia, Huenninghaus, Maike, Koller, Robert, Krueger, Dirk, Marhan, Sven, Urich, Tim, Wubet, Tesfaye, Bonkowski, Michael, Buscot, François, Lueders, Tillmann, Kandeler, Ellen

“…The flow of plant-derived carbon in soil is a key component of global carbon cycling. Conceptual models of trophic carbon fluxes in soil have assumed separate…”
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Disentangling carbon flow across microbial kingdoms in the rhizosphere of maize by Hünninghaus, Maike, Dibbern, Dörte, Kramer, Susanne, Koller, Robert, Pausch, Johanna, Schloter-Hai, Brigitte, Urich, Tim, Kandeler, Ellen, Bonkowski, Michael, Lueders, Tillmann

“…Numerous 13CO2 labeling studies have traced the flow of carbon from fresh plant exudates into rhizosphere bacterial communities. However, the succession of the…”
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Detection of TurboID fusion proteins by fluorescent streptavidin outcompetes antibody signals and visualises targets not accessible to antibodies by Odenwald, Johanna, Gabiatti, Bernardo, Braune, Silke, Shen, Siqi, Zoltner, Martin, Kramer, Susanne

“…Immunofluorescence localises proteins via fluorophore-labelled antibodies. However, some proteins evade detection due to antibody-accessibility issues or…”
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Comparative proteomics of the two T. brucei PABPs suggests that PABP2 controls bulk mRNA by Zoltner, Martin, Krienitz, Nina, Field, Mark C, Kramer, Susanne

“…Poly(A)-binding proteins (PABPs) regulate mRNA fate by controlling stability and translation through interactions with both the poly(A) tail and eIF4F complex…”
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A novel SNF2 ATPase complex in Trypanosoma brucei with a role in H2A.Z-mediated chromatin remodelling by Vellmer, Tim, Hartleb, Laura, Fradera Sola, Albert, Kramer, Susanne, Meyer-Natus, Elisabeth, Butter, Falk, Janzen, Christian J

“…A cascade of histone acetylation events with subsequent incorporation of a histone H2A variant plays an essential part in transcription regulation in various…”
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Changes in bacterial community composition and soil respiration indicate rapid successions of protist grazers during mineralization of maize crop residues by Hünninghaus, Maike, Koller, Robert, Kramer, Susanne, Marhan, Sven, Kandeler, Ellen, Bonkowski, Michael

“…•Succession of protist grazers during two phases of maize litter decomposition.•Rapid phase of residue mineralization influenced by identity of protist…”
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Multispecies reconstructions uncover widespread conservation, and lineage-specific elaborations in eukaryotic mRNA metabolism by Bannerman, Bridget P, Kramer, Susanne, Dorrell, Richard G, Carrington, Mark

“…The degree of conservation and evolution of cytoplasmic mRNA metabolism pathways across the eukaryotes remains incompletely resolved. In this study, we…”
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Comprehensive orthodontic treatment using miniscrews and digital rehabilitation in a patient with severe recessive dystrophic epidermolysis bullosa by Véliz Méndez, Sebastián, Baeza Paredes, Mauricio, Olivares, Antonio, Vicuña, María José, Krämer Strenger, Susanne M.

“…Introduction Epidermolysis bullosa (EB) is a rare genetic disorder characterized by skin fragility and blister formation. The phenotypic presentation is broad…”
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Nucleoside analogue activators of cyclic AMP-independent protein kinase A of Trypanosoma by Bachmaier, Sabine, Volpato Santos, Yuri, Kramer, Susanne, Githure, George Boniface, Klöckner, Thomas, Pepperl, Julia, Baums, Cordula, Schenk, Robin, Schwede, Frank, Genieser, Hans-Gottfried, Dupuy, Jean-William, Forné, Ignasi, Imhof, Axel, Basquin, Jerôme, Lorentzen, Esben, Boshart, Michael

“…Protein kinase A (PKA), the main effector of cAMP in eukaryotes, is a paradigm for the mechanisms of ligand-dependent and allosteric regulation in signalling…”
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Genome-wide in silico screen for CCCH-type zinc finger proteins of Trypanosoma brucei, Trypanosoma cruzi and Leishmania major by Kramer, Susanne, Kimblin, Nicola C, Carrington, Mark

“…CCCH type zinc finger proteins are RNA binding proteins with regulatory functions at all stages of mRNA metabolism. The best-characterized member,…”
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Visual Evoked Potentials Used to Evaluate a Commercially Available Superabsorbent Polymer as a Cheap and Efficient Material for Preparation-Free Electrodes for Recording Electrical Potentials of the Human Visual Cortex by Straßer, Torsten, Kramer, Susanne, Kempf, Melanie, Peters, Tobias, Kurtenbach, Anne, Zrenner, Eberhart

“…The aim of this study was to investigate the use of inexpensive and easy-to-use hydrogel "marble" electrodes for the recording of electrical potentials of the…”
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The nucleolar DExD/H protein Hel66 is involved in ribosome biogenesis in Trypanosoma brucei by Bakari-Soale, Majeed, Ikenga, Nonso Josephat, Scheibe, Marion, Butter, Falk, Jones, Nicola G., Kramer, Susanne, Engstler, Markus

“…The biosynthesis of ribosomes is a complex cellular process involving ribosomal RNA, ribosomal proteins and several further trans-acting factors. DExD/H box…”
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A quorum sensing-independent path to stumpy development in Trypanosoma brucei by Zimmermann, Henriette, Subota, Ines, Batram, Christopher, Kramer, Susanne, Janzen, Christian J, Jones, Nicola G, Engstler, Markus

“…For persistent infections of the mammalian host, African trypanosomes limit their population size by quorum sensing of the parasite-excreted stumpy induction…”
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Is mRNA decapping by ApaH like phosphatases present in eukaryotes beyond the Kinetoplastida? by Castañeda Londoño, Paula Andrea, Banholzer, Nicole, Bannermann, Bridget, Kramer, Susanne

“…Abstract Background ApaH like phosphatases (ALPHs) originate from the bacterial ApaH protein and have been identified in all eukaryotic super-groups. Only two…”
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Differential localization of the two T. brucei poly(A) binding proteins to the nucleus and RNP granules suggests binding to distinct mRNA pools by Kramer, Susanne, Bannerman-Chukualim, Bridget, Ellis, Louise, Boulden, Elizabeth A, Kelly, Steve, Field, Mark C, Carrington, Mark

“…The number of paralogs of proteins involved in translation initiation is larger in trypanosomes than in yeasts or many metazoan and includes two poly(A)…”
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