Search Results - "Kozminski, Wiktor"

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    Mechanism of Atg9 recruitment by Atg11 in the cytoplasm-to-vacuole targeting pathway by Coudevylle, Nicolas, Banaś, Bartłomiej, Baumann, Verena, Schuschnig, Martina, Zawadzka-Kazimierczuk, Anna, Koźmiński, Wiktor, Martens, Sascha

    Published in The Journal of biological chemistry (01-02-2022)
    “…Autophagy is a lysosomal degradation pathway for the removal of damaged and superfluous cytoplasmic material. This is achieved by the sequestration of this…”
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    High-dimensional NMR methods for intrinsically disordered proteins studies by Grudziąż, Katarzyna, Zawadzka-Kazimierczuk, Anna, Koźmiński, Wiktor

    Published in Methods (San Diego, Calif.) (15-09-2018)
    “…•Chemical shift ranges of intrinsically disordered proteins are exceptionally narrow.•Non-uniform sampling enables acquisition of NMR spectra of high…”
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    Metal-coupled folding as the driving force for the extreme stability of Rad50 zinc hook dimer assembly by Kochańczyk, Tomasz, Nowakowski, Michał, Wojewska, Dominika, Kocyła, Anna, Ejchart, Andrzej, Koźmiński, Wiktor, Krężel, Artur

    Published in Scientific reports (03-11-2016)
    “…The binding of metal ions at the interface of protein complexes presents a unique and poorly understood mechanism of molecular assembly. A remarkable example…”
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    Non-uniform frequency domain for optimal exploitation of non-uniform sampling by Kazimierczuk, Krzysztof, Zawadzka-Kazimierczuk, Anna, Koźmiński, Wiktor

    Published in Journal of magnetic resonance (1997) (01-08-2010)
    “…Random sampling of NMR signal, not limited by Nyquist Theorem, yields up to thousands-fold gain in the experiment time required to obtain desired spectral…”
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    Metal Exchange in the Interprotein Zn II -Binding Site of the Rad50 Hook Domain: Structural Insights into Cd II -Induced DNA-Repair Inhibition by Padjasek, Michał, Maciejczyk, Maciej, Nowakowski, Michał, Kerber, Olga, Pyrka, Maciej, Koźmiński, Wiktor, Krężel, Artur

    Published in Chemistry : a European journal (12-03-2020)
    “…Cd is a major genotoxic agent that readily displaces Zn in a multitude of zinc proteins, abrogates redox homeostasis, and deregulates cellular metalloproteome…”
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    Suppression of sampling artefacts in high-resolution four-dimensional NMR spectra using signal separation algorithm by Stanek, Jan, Augustyniak, Rafal, Koźmiński, Wiktor

    “…[Display omitted] ► A four-dimensional version of signal separation algorithm has been presented. ► 4D HCCH-TOCSY and 4D C, N-edited NOESY were performed on a…”
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    Applications of high dimensionality experiments to biomolecular NMR by Nowakowski, Michał, Saxena, Saurabh, Stanek, Jan, Żerko, Szymon, Koźmiński, Wiktor

    “…High dimensionality NMR experiments facilitate resonance assignment and precise determination of spectral parameters such as coupling constants. Sparse…”
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    Accelerating Diffusion-Ordered NMR Spectroscopy by Joint Sparse Sampling of Diffusion and Time Dimensions by Urbańczyk, Mateusz, Koźmiński, Wiktor, Kazimierczuk, Krzysztof

    Published in Angewandte Chemie International Edition (16-06-2014)
    “…Diffusion‐ordered multidimensional NMR spectroscopy is a valuable technique for the analysis of complex chemical mixtures. However, this method is very…”
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    The assignment of 11B and 1H resonances in the post‐reaction mixture from the dry synthesis of Li(BH3NH2BH2NH2BH3) by Nawrocka, Ewa K., Prus, Agnieszka, Owarzany, Rafał, Koźmiński, Wiktor, Kazimierczuk, Krzysztof, Fijalkowski, Karol J.

    Published in Magnetic resonance in chemistry (01-01-2023)
    “…We report a detailed 1H NMR and 11B NMR study of as synthesised Li(BH3NH2BH2NH2BH3) obtained in a novel dry‐synthesis method. A combination of 1D and 2D…”
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    Structure, dynamics, and function of SrnR, a transcription factor for nickel-dependent gene expression by Mazzei, Luca, Musiani, Francesco, Żerko, Szymon, Koźminski, Wiktor, Cianci, Michele, Beniamino, Ylenia, Ciurli, Stefano, Zambelli, Barbara

    Published in Metallomics (20-12-2021)
    “…Streptomyces griseus, a bacterium producing antibacterial drugs and featuring possible application in phytoremediation, expresses two metal-dependent…”
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    Phase transition induced improvement in H2 desorption kinetics: the case of the high-temperature form of Y(BH4)3 by Jaroń, Tomasz, Koźmiński, Wiktor, Grochala, Wojciech

    Published in Physical chemistry chemical physics : PCCP (21-05-2011)
    “…The high-temperature (HT) phase of Y(BH(4))(3) has been prepared by heating of the as mechanochemically synthesised low-temperature (LT) phase of Y(BH(4))(3)…”
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    Joint non-uniform sampling of all incremented time delays for quicker acquisition in protein relaxation studies by Urbańczyk, Mateusz, Nowakowski, Michał, Koźmiński, Wiktor, Kazimierczuk, Krzysztof

    Published in Journal of biomolecular NMR (01-06-2017)
    “…NMR relaxometry plays crucial role in studies of protein dynamics. The measurement of longitudinal and transverse relaxation rates of 15 N is the main source…”
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    Metal Exchange in the Interprotein ZnII‐Binding Site of the Rad50 Hook Domain: Structural Insights into CdII‐Induced DNA‐Repair Inhibition by Padjasek, Michał, Maciejczyk, Maciej, Nowakowski, Michał, Kerber, Olga, Pyrka, Maciej, Koźmiński, Wiktor, Krężel, Artur

    Published in Chemistry : a European journal (12-03-2020)
    “…CdII is a major genotoxic agent that readily displaces ZnII in a multitude of zinc proteins, abrogates redox homeostasis, and deregulates cellular…”
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    High-Dimensional NMR Spectra for Structural Studies of Biomolecules by Kazimierczuk, Krzysztof, Stanek, Jan, Zawadzka-Kazimierczuk, Anna, Koźmiński, Wiktor

    Published in Chemphyschem (16-09-2013)
    “…Recent developments in the acquisition and processing of NMR data sets facilitate the recording of ultra‐high‐resolution NMR spectra in a reasonable time. The…”
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    Lineshapes and artifacts in Multidimensional Fourier Transform of arbitrary sampled NMR data sets by Kazimierczuk, Krzysztof, Zawadzka, Anna, Koźmiński, Wiktor, Zhukov, Igor

    Published in Journal of magnetic resonance (1997) (01-10-2007)
    “…The comprehensive description of Multidimensional Fourier Transform applied to arbitrary sampled NMR data is presented. Lineshapes and signal-to-artifact ratio…”
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    Reconstruction of non-uniformly sampled five-dimensional NMR spectra by signal separation algorithm by Kosiński, Krzysztof, Stanek, Jan, Górka, Michał J., Żerko, Szymon, Koźmiński, Wiktor

    Published in Journal of biomolecular NMR (01-06-2017)
    “…A method for five-dimensional spectral reconstruction of non-uniformly sampled NMR data sets is proposed. It is derived from the previously published signal…”
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    Speeding up sequence specific assignment of IDPs by Bermel, Wolfgang, Bertini, Ivano, Felli, Isabella C., Gonnelli, Leonardo, Koźmiński, Wiktor, Piai, Alessandro, Pierattelli, Roberta, Stanek, Jan

    Published in Journal of biomolecular NMR (01-08-2012)
    “…The characterization of intrinsically disordered proteins (IDPs) by NMR spectroscopy is made difficult by the extensive spectral overlaps. To overcome the…”
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    Artifacts in time-resolved NUS: A case study of NOE build-up curves from 2D NOESY by Dass, Rupashree, Kasprzak, Paweł, Koźmiński, Wiktor, Kazimierczuk, Krzysztof

    Published in Journal of magnetic resonance (1997) (01-04-2016)
    “…[Display omitted] •Theory of artifacts in time-resolved non-uniform sampling (TR-NUS) is introduced.•Theoretical considerations are verified on build-up curves…”
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