Search Results - "Kozlowski, Lukasz"

Proteome-pI: proteome isoelectric point database by Kozlowski, Lukasz P

“…Proteome-pI is an online database containing information about predicted isoelectric points for 5029 proteomes calculated using 18 methods. The isoelectric…”
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IPC - Isoelectric Point Calculator by Kozlowski, Lukasz P

“…Accurate estimation of the isoelectric point (pI) based on the amino acid sequence is useful for many analytical biochemistry and proteomics techniques such as…”
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IPC 2.0: prediction of isoelectric point and pKa dissociation constants by Kozlowski, Lukasz Pawel

“…Abstract The isoelectric point is the pH at which a particular molecule is electrically neutral due to the equilibrium of positive and negative charges. In…”
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MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins by Kozlowski, Lukasz P, Bujnicki, Janusz M

“…Intrinsically unstructured proteins (IUPs) lack a well-defined three-dimensional structure. Some of them may assume a locally stable structure under specific…”
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Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631 by Plotka, Magdalena, Kaczorowska, Anna-Karina, Morzywolek, Agnieszka, Makowska, Joanna, Kozlowski, Lukasz P, Thorisdottir, Audur, Skírnisdottir, Sigurlaug, Hjörleifsdottir, Sigridur, Fridjonsson, Olafur H, Hreggvidsson, Gudmundur O, Kristjansson, Jakob K, Dabrowski, Slawomir, Bujnicki, Janusz M, Kaczorowski, Tadeusz

“…Phage vB_Tsc2631 infects the extremophilic bacterium Thermus scotoductus MAT2631 and uses the Ts2631 endolysin for the release of its progeny. The Ts2631…”
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CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction by Puton, Tomasz, Kozlowski, Lukasz P, Rother, Kristian M, Bujnicki, Janusz M

“…We present a continuous benchmarking approach for the assessment of RNA secondary structure prediction methods implemented in the CompaRNA web server. As of 3…”
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Structure and function of the Ts2631 endolysin of Thermus scotoductus phage vB_Tsc2631 with unique N-terminal extension used for peptidoglycan binding by Plotka, Magdalena, Sancho-Vaello, Enea, Dorawa, Sebastian, Kaczorowska, Anna-Karina, Kozlowski, Lukasz P., Kaczorowski, Tadeusz, Zeth, Kornelius

“…To escape from hosts after completing their life cycle, bacteriophages often use endolysins, which degrade bacterial peptidoglycan. While mesophilic phages…”
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GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function by Pietal, Michal J, Bujnicki, Janusz M, Kozlowski, Lukasz P

“…To date, only a few distinct successful approaches have been introduced to reconstruct a protein 3D structure from a map of contacts between its amino acid…”
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Molecular Characterization of a DNA Polymerase from Thermus thermophilus MAT72 Phage vB_Tt72: A Novel Type-A Family Enzyme with Strong Proofreading Activity by Dorawa, Sebastian, Werbowy, Olesia, Plotka, Magdalena, Kaczorowska, Anna-Karina, Makowska, Joanna, Kozlowski, Lukasz P, Fridjonsson, Olafur H, Hreggvidsson, Gudmundur O, Aevarsson, Arnthór, Kaczorowski, Tadeusz

“…We present a structural and functional analysis of the DNA polymerase of thermophilic Thermus thermophilus MAT72 phage vB_Tt72. The enzyme shows low sequence…”
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Computational methods for prediction of protein–RNA interactions by Puton, Tomasz, Kozlowski, Lukasz, Tuszynska, Irina, Rother, Kristian, Bujnicki, Janusz M.

“…Understanding the molecular mechanism of protein–RNA recognition and complex formation is a major challenge in structural biology. Unfortunately, the…”
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UV Sensor Based on Fiber Bragg Grating Covered with Graphene Oxide Embedded in Composite Materials by Lesiak, Piotr, Bednarska, Karolina, Małkowski, Krzysztof, Kozłowski, Łukasz, Wróblewska, Anna, Sobotka, Piotr, Dydek, Kamil, Boczkowska, Anna, Osuch, Tomasz, Anuszkiewicz, Alicja, Lewoczko-Adamczyk, Wojciech, Schröder, Henning, Woliński, Tomasz Ryszard

“…Polymer–matrix composites degrade under the influence of UV radiation in the range of the 290–400 nm band. The degradation of polymer–matrix composites exposed…”
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Novel Lytic Enzyme of Prophage Origin from Clostridium botulinum E3 Strain Alaska E43 with Bactericidal Activity against Clostridial Cells by Morzywolek, Agnieszka, Plotka, Magdalena, Kaczorowska, Anna-Karina, Szadkowska, Monika, Kozlowski, Lukasz P., Wyrzykowski, Dariusz, Makowska, Joanna, Waters, Jerel J., Swift, Steven M., Donovan, David M., Kaczorowski, Tadeusz

“…Clostridium botulinum is a Gram-positive, anaerobic, spore-forming bacterium capable of producing botulinum toxin and responsible for botulism of humans and…”
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Computational modeling of protein–RNA complex structures by Tuszynska, Irina, Matelska, Dorota, Magnus, Marcin, Chojnowski, Grzegorz, Kasprzak, Joanna M., Kozlowski, Lukasz P., Dunin-Horkawicz, Stanislaw, Bujnicki, Janusz M.

“…Protein–RNA interactions play fundamental roles in many biological processes, such as regulation of gene expression, RNA splicing, and protein synthesis. The…”
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Novel Highly Thermostable Endolysin from Thermus scotoductus MAT2119 Bacteriophage Ph2119 with Amino Acid Sequence Similarity to Eukaryotic Peptidoglycan Recognition Proteins by Plotka, Magdalena, Kaczorowska, Anna-Karina, Stefanska, Aleksandra, Morzywolek, Agnieszka, Fridjonsson, Olafur H, Dunin-Horkawicz, Stanislaw, Kozlowski, Lukasz, Hreggvidsson, Gudmundur O, Kristjansson, Jakob K, Dabrowski, Slawomir, Bujnicki, Janusz M, Kaczorowski, Tadeusz

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction by Puton, Tomasz, Kozlowski, Lukasz P., Rother, Kristian M., Bujnicki, Janusz M.

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Female-specific gene expression in dioecious liverwort Pellia endiviifolia is developmentally regulated and connected to archegonia production by Sierocka, Izabela, Kozlowski, Lukasz P, Bujnicki, Janusz M, Jarmolowski, Artur, Szweykowska-Kulinska, Zofia

“…In flowering plants a number of genes have been identified which control the transition from a vegetative to generative phase of life cycle. In bryophytes…”
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Molecular characterization of the PhiKo endolysin from Thermus thermophilus HB27 bacteriophage phiKo and its cryptic lytic peptide RAP-29 by Szadkowska, Monika, Kocot, Aleksandra Maria, Sowik, Daria, Wyrzykowski, Dariusz, Jankowska, Elzbieta, Kozlowski, Lukasz Pawel, Makowska, Joanna, Plotka, Magdalena

“…In the era of increasing bacterial resistance to antibiotics, new bactericidal substances are sought, and lysins derived from extremophilic organisms have the…”
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Proteome-pI 2.0: proteome isoelectric point database update by Kozlowski, Lukasz Pawel

“…Abstract Proteome-pI 2.0 is an update of an online database containing predicted isoelectric points and pKa dissociation constants of proteins and peptides…”
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IPC 2.0: prediction of isoelectric point and p K a dissociation constants by Kozlowski, Lukasz Pawel

“…The isoelectric point is the pH at which a particular molecule is electrically neutral due to the equilibrium of positive and negative charges. In proteins and…”
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Algorithm for the remote sensing of the Baltic ecosystem (DESAMBEM). Part 1: Mathematical apparatus by Jerzy Olszewski, Miros/lawa Ostrowska, Dariusz Ficek, /Lukasz Kozłowski, Roman Majchrowski, S/lawomir B. Woźniak, Bogdan Woźniak, Mirosław Darecki, Jerzy Dera, Adam Krężel

“…This article is the first of two papers on the remotesensing methods of monitoring the Baltic ecosystem, developedby our team. Earlier, we had produced a…”
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