Search Results - "Kozlov, Konstantin N"

Impact of Negative Feedbacks on De Novo Pyrimidines Biosynthesis in Escherichia coli by Akberdin, Ilya R, Kozlov, Konstantin N, Kazantsev, Fedor V, Fadeev, Stanislav I, Likhoshvai, Vitaly A, Khlebodarova, Tamara M

“…Earlier studies aimed at investigating the metabolism of endogenous nucleoside triphosphates in synchronous cultures of cells revealed an auto-oscillatory mode…”
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Dynamic control of positional information in the early Drosophila embryo by Reinitz, John, Jaeger, Johannes, Surkova, Svetlana, Blagov, Maxim, Janssens, Hilde, Kosman, David, Kozlov, Konstantin N, Manu, Myasnikova, Ekaterina, Vanario-Alonso, Carlos E, Samsonova, Maria, Sharp, David H

“…Morphogen gradients contribute to pattern formation by determining positional information in morphogenetic fields. Interpretation of positional information is…”
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Dynamical Modeling of the Core Gene Network Controlling Flowering Suggests Cumulative Activation From the FLOWERING LOCUS T Gene Homologs in Chickpea by Gursky, Vitaly V, Kozlov, Konstantin N, Nuzhdin, Sergey V, Samsonova, Maria G

“…Initiation of flowering moves plants from vegetative to reproductive development. The time when this transition happens (flowering time), an important…”
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Translating natural genetic variation to gene expression in a computational model of the Drosophila gap gene regulatory network by Gursky, Vitaly V, Kozlov, Konstantin N, Kulakovskiy, Ivan V, Zubair, Asif, Marjoram, Paul, Lawrie, David S, Nuzhdin, Sergey V, Samsonova, Maria G

“…Annotating the genotype-phenotype relationship, and developing a proper quantitative description of the relationship, requires understanding the impact of…”
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Dynamical Analysis of Regulatory Interactions in the Gap Gene System of Drosophila melanogaster by Jaeger, Johannes, Blagov, Maxim, Kosman, David, Kozlov, Konstantin N, Manu, Myasnikova, Ekaterina, Surkova, Svetlana, Vanario-Alonso, Carlos E, Samsonova, Maria, Sharp, David H, Reinitz, John

“…Genetic studies have revealed that segment determination in Drosophila melanogaster is based on hierarchical regulatory interactions among maternal coordinate…”
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A new stochastic model for subgenomic hepatitis C virus replication considers drug resistant mutants by Ivanisenko, Nikita V, Mishchenko, Elena L, Akberdin, Ilya R, Demenkov, Pavel S, Likhoshvai, Vitaly A, Kozlov, Konstantin N, Todorov, Dmitry I, Gursky, Vitaly V, Samsonova, Maria G, Samsonov, Alexander M, Clausznitzer, Diana, Kaderali, Lars, Kolchanov, Nikolay A, Ivanisenko, Vladimir A

“…As an RNA virus, hepatitis C virus (HCV) is able to rapidly acquire drug resistance, and for this reason the design of effective anti-HCV drugs is a real…”
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Pipeline for acquisition of quantitative data on segmentation gene expression from confocal images by Surkova, Svetlana, Myasnikova, Ekaterina, Janssens, Hilde, Kozlov, Konstantin N., Samsonova, Anastasia A., Reinitz, John, Samsonova, Maria

“…We describe a data pipeline developed to extract the quantitative data on segmentation gene expression from confocal images of gene expression patterns in…”
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GCPReg package for registration of the segmentation gene expression data in Drosophila by Kozlov, Konstantin N., Myasnikova, Ekaterina, Samsonova, Anastasia A., Surkova, Svetlana, Reinitz, John, Samsonova, Maria

“…In modern functional genomics registration techniques are used to construct reference gene expression patterns and create a spatiotemporal atlas of the…”
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In silico evolution of the Drosophila gap gene regulatory sequence under elevated mutational pressure by Chertkova, Aleksandra A, Schiffman, Joshua S, Nuzhdin, Sergey V, Kozlov, Konstantin N, Samsonova, Maria G, Gursky, Vitaly V

“…Cis-regulatory sequences are often composed of many low-affinity transcription factor binding sites (TFBSs). Determining the evolutionary and functional…”
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Statistical method for estimation of the predictive power of a gene circuit model by Myasnikova, Ekaterina, Kozlov, Konstantin N

“…In this paper, a specific aspect of the prediction problem is considered: high predictive power is understood as a possibility to reproduce correct behavior of…”
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Quantitative imaging of gene expression in Drosophila embryos by Surkova, Svetlana, Myasnikova, Ekaterina, Kozlov, Konstantin N, Pisarev, Andrei, Reinitz, John, Samsonova, Maria

“…Quantitative measurements derived using sophisticated microscopy techniques are essential for understanding the basic principles that control the behavior of…”
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Preparation of Drosophila embryos for quantitative imaging of gene expression by Surkova, Svetlana, Myasnikova, Ekaterina, Kozlov, Konstantin N, Pisarev, Andrei, Reinitz, John, Samsonova, Maria

“…Quantitative measurements derived using sophisticated microscopy techniques are essential for understanding the basic principles that control the behavior of…”
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Pattern formation and nuclear divisions are uncoupled in Drosophila segmentation: comparison of spatially discrete and continuous models by Gursky, Vitaly V., Jaeger, Johannes, Kozlov, Konstantin N., Reinitz, John, Samsonov, Alexander M.

“…We study the relationship between pattern formation in Drosophila segment determination and nuclear structure by replacing the nuclei by a homogeneous…”
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Impact of Negative Feedbacks on De Novo Pyrimidines Biosynthesis in IEscherichia coli/I by Akberdin, Ilya R, Kozlov, Konstantin N, Kazantsev, Fedor V, Fadeev, Stanislav I, Likhoshvai, Vitaly A, Khlebodarova, Tamara M

“…Earlier studies aimed at investigating the metabolism of endogenous nucleoside triphosphates in synchronous cultures of E. coli cells revealed an…”
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Human Pluripotent Stem Cell Colony Migration Is Related to Culture Environment and Morphological Phenotype by Gursky, Vitaly V., Chabina, Alina S., Krasnova, Olga A., Kovaleva, Anastasiia A., Kriger, Daria V., Zadorsky, Michail S., Kozlov, Konstantin N., Neganova, Irina E.

“…Human pluripotent stem cells (hPSCs) are an important tool in the field of regenerative medicine due to their ability to differentiate towards all tissues of…”
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Dynamical analysis of regulatory interactions in the gap gene system of Dosophila melanogaster by Jaeger, Johannes, Blagov, Maxim, Kosman, David, Kozlov, Konstantin N

“…Genetic studies have revealed that segment determination in Drosophila melanogaster is based on hierarchical regulatory interactions among maternal coordinate…”
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A New Stochastic Model for Subgenomic Hepatitis C Virus Replication Considers Drug Resistant Mutants: e91502 by Ivanisenko, Nikita V, Mishchenko, Elena L, Akberdin, Ilya R, Demenkov, Pavel S, Likhoshvai, Vitaly A, Kozlov, Konstantin N, Todorov, Dmitry I, Gursky, Vitaly V, Samsonova, Maria G, Samsonov, Alexander M

“…As an RNA virus, hepatitis C virus (HCV) is able to rapidly acquire drug resistance, and for this reason the design of effective anti-HCV drugs is a real…”
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Cell divisions as a mechanism for selection in stable steady states of multi-stationary gene circuits by Gursky, Vitaly V., Kozlov, Konstantin N., Samsonov, Alexander M., Reinitz, John

“…We study the properties of attractors and their basins of attraction in gene circuits whose dynamics is accompanied by cell divisions (mitosis). The dynamical…”
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Cell divisions as a mechanism for selection in stable steady states of multi-stationary gene circuits by GURSKY, Vitaly V, KOZLOV, Konstantin N, SAMSONOV, Alexander M, REINITZ, John

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Dynamic control of positional information in the early Drosophila embryo by JAEGER, Johannes, SURKOVA, Svetlana, SHARP, David H, REINITZ, John, BLAGOV, Maxim, JANSSENS, Hilde, KOSMAN, David, KOZLOV, Konstantin N, MANU, MYASNIKOVA, Ekaterina, VANARIO-ALONSO, Carlos E, SAMSONOVA, Maria

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