Search Results - "Koumakis, L."

Modeling Susceptibility to Periodontitis by Laine, M.L., Moustakis, V., Koumakis, L., Potamias, G., Loos, B.G.

“…Chronic inflammatory diseases like periodontitis have a complex pathogenesis and a multifactorial etiology, involving complex interactions between multiple…”
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Integrating Microarray Data and GRNs by Koumakis, L, Potamias, G, Tsiknakis, M, Zervakis, M, Moustakis, V

“…With the completion of the Human Genome Project and the emergence of high-throughput technologies, a vast amount of molecular and biological data are being…”
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Bridging miRNAs and pathway analysis in clinical decision support: a case study in nephroblastoma by Koumakis, L., Sigdel, K., Potamias, G., Sfakianakis, S., van Leeuwen, J., Zacharioudakis, G., Moustakis, V., Zervakis, M., Bucur, A., Marias, K., Graf, N., Tsiknakis, M.

“…Wilms’ tumor, or nephroblastoma, is a cancer of the kidneys that typically occurs in children and rarely in adults. Around 10 % of Wilms’ tumor patients are…”
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CARDIOCARE: An integrated platform for the management of elderly multimorbid patients with breast cancer therapy induced cardiac toxicity by Karanasiou, G., Koumakis, L., Sfakianakis, S., Manikis, G., Kalliatakis, G., Antoniades, A., Lakkas, L., Mauri, D., Cipolla, C., Mazzocco, K., Papakonstantinou, A., Filippatos, G., Constantinidou, A., Seruga, B., Conti, C., Bucur, A., Pacella, E., Marias, K., Tsiknakis, M., Fotiadis, D.I.

“…Breast cancer (BC) remains the most diagnosed cancer in women, accounting for 12% of new annual cancer cases in Europe and worldwide. Advances in surgery,…”
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An algorithmic approach for the effect of transcription factor binding sites over functional gene regulatory networks by Koumakis, L., Potamias, G., Marias, K., Tsiknakis, M.

“…Demand for analyzing very large datasets is increasing, especially with the introduction of chromatin immunoprecipitation sequencing which is a recent method…”
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Vision-based absence seizure detection by Pediaditis, M., Tsiknakis, M., Koumakis, L., Karachaliou, M., Voutoufianakis, S., Vorgia, P.

“…In order to diagnose epilepsy, neurologists rely on their experience, performing an equal assessment of the electroencephalogram and the clinical image. Since…”
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Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health by Holub, Petr, Kohlmayer, Florian, Prasser, Fabian, Mayrhofer, Michaela Th, Schlünder, Irene, Martin, Gillian M, Casati, Sara, Koumakis, Lefteris, Wutte, Andrea, Kozera, Łukasz, Strapagiel, Dominik, Anton, Gabriele, Zanetti, Gianluigi, Sezerman, Osman Ugur, Mendy, Maimuna, Valík, Dalibor, Lavitrano, Marialuisa, Dagher, Georges, Zatloukal, Kurt, van Ommen, GertJan B, Litton, Jan-Eric

“…The known challenge of underutilization of data and biological material from biorepositories as potential resources for medical research has been the focus of…”
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Enhancing Web Based Services by Coupling Document Classification with User Profile by Potamias, G., Koumakis, L., Moustakis, V.S.

“…Current Web search engines are not able to adapt their operations to the evolving needs, interests and preferences of the users. To cope with this weakness, we…”
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Integrating microarray data and gene regulatory networks: Survey and critical considerations by Koumakis, L., Potamias, G., Zervakis, M., Moustakis, V.

“…Microarray gene expression and gene regulatory interactions are two of the most significant data sources in the areas of molecular biology and biotechnology…”
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A new gene expression signature related to breast cancer estrogen receptor status by Christodoulou, E., Ioannou, M., Kafousi, M., Sanidas, E., Papagiannakis, G., Danilatou, V., Tsiliki, G., Margaritis, T., Kondylakis, H., Manakanatas, D., Koumakis, L., Kanterakis, A., Vassilaros, S., Tsiknakis, M., Analyti, A., Potamias, G., Tsiftsis, D., Stathopoulos, E., Kafetzopoulos, D.

“…The aim of this study is to identify a gene expression signature which is characteristic of ER status in breast cancer patients. To our knowledge, this is the…”
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Using Electronic Patient Reported Outcomes to Foster Palliative Cancer Care: The MyPal Approach by Maramis, Christos, Karamanidou, Christina, Schera, Fatima, Kiefer, Stephan, Koumakis, Lefteris, Marias, Konstantinos, Hoffmann, Stefan, Parker, Heather, Reston, Jonathan, Payne, Sheila, Pospisilova, Sarka, Rosenquist, Richard, Ghia, Paolo, Pontikoglou, Charalampos, Sander, Annette, Doubek, Michael, Graf, Norbert, Ling, Julie, Downing, Julia, Pavi, Elpida, Koutkias, Vassilis

“…Palliative care is offered along with primary treatment to improve the quality of life of the patient by relieving the symptoms and stress of a serious illness…”
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miRNA Based Pathway Analysis Tool in Nephroblastoma as a Proof of Principle for other Cancer Domains by Koumakis, L., Potamias, G., Sfakianakis, S., Moustakis, V., Zervakis, M., Graf, N., Tsiknakis, M.

“…Wilms tumor, or nephroblastoma, is a cancer of the kidneys that typically occurs in children and rarely in adults. Around 10% of Wilms tumor patients are…”
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IEmS: A collaborative environment for patient empowerment by Kondylakis, H., Koumakis, L., Genitsaridi, E., Tsiknakis, M., Marias, K., Pravettoni, G., Gorini, A., Mazzocco, K.

“…Personalized medicine refers to the tailoring of treatment to the individual characteristics of a patient. Part of the personalized medicine is the patient…”
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Experimental model construction and validation of the ErbB signaling pathway by Kalantzaki, K., Koumakis, L., Bei, E. S., Zervakis, M., Potamias, G., Kafetzopoulos, D.

“…The importance of ErbB receptor signaling in breast cancer is consistent with its functional role in normal development of mammary gland. The study of the ErbB…”
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Web-Based Authoring and Secure Enactment of Bioinformatics Workflows by Sfakianakis, S., Koumakis, L., Zacharioudakis, G., Tsiknakis, M.

“…The recent advances in the field of bioinformatics present a number of challenges in the secure and efficient management and analysis of biological data…”
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Supporting genotype-to-phenotype association studies with grid-enabled knowledge discovery workflows by Koumakis, L., Moustakis, V., Tsiknakis, M., Kafetzopoulos, D., Potamias, G.

“…Web Services and grid-enabled scientific workflows are of paramount importance for the realization of efficient and secure knowledge discovery scenarios. This…”
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A Semantic Infrastructure for the Integration of Bioinformatics Services by Zacharioudakis, G., Koumakis, L., Sfakianakis, S., Tsiknakis, M.

“…Web services integration has been a vigorous research area for the last years. With the introduction of the semantic Web the publication of expressive metadata…”
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A semantically aware platform for the authoring and secure enactment of bioinformatics workflows by Tsiknakis, M., Sfakianakis, S., Zacharioudakis, G., Umakis, L.K., Kanterakis, A., Potamias, G., Kafetzopoulos, D.

“…Recent advances in the field of bioinformatics present a number of challenges in the secure and efficient management and analysis of biological data resources…”
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Knowledge Discovery Scientific Workflows in Clinico-Genomics by Potamias, G., Koumakis, L., Kanterakis, A., Sfakianakis, S., Analyti, A., Moustakis, V., Kafetzopoulos, D., Rueping, S., Tsiknakis, M.

“…With the completion of the human genome and the entrance into the post-genomic era, translational research rises as a major need. In this paper, we present a…”
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