Search Results - "Koshiyama, Akiyo"

Comprehensive fluorogenic derivatization-liquid chromatography/tandem mass spectrometry proteomic analysis of colorectal cancer cell to identify biomarker candidate by Koshiyama, Akiyo, Ichibangase, Tomoko, Imai, Kazuhiro

“…ABSTRACT Existing colorectal cancer biomarkers are insufficient for providing a quick and accurate diagnosis, which is critical for a good prognosis. More…”
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Synthesis and evaluation of a fluorogenic reagent for proteomic studies: 7-fluoro-N-[2-(dimethylamino)ethyl]-2,1,3-benzoxadiazole-4-sulfonamide (DAABD-F) by Koshiyama, Akiyo, Imai, Kazuhiro

“…Since the successful selection of fluorogenic derivatization reagent 7-chloro-N-[2-(dimethylamino)ethyl]-2,1,3-benzoxadiazole-4-sulfonamide (DAABD-Cl) as a…”
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An FD-LC-MS/MS proteomic strategy for revealing cellular protein networks: a conditional superoxide dismutase 1 knockout cells by Ichibangase, Tomoko, Sugawara, Yasuhiro, Yamabe, Akio, Koshiyama, Akiyo, Yoshimura, Akari, Enomoto, Takemi, Imai, Kazuhiro

“…Systems biology aims to understand biological phenomena in terms of complex biological and molecular interactions, and thus proteomics plays an important role…”
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Towards clinical proteomics analysis by Imai, Kazuhiro, Koshiyama, Akiyo, Nakata, Katsunori

“…To understand accurate protein dynamics, a highly reproducible proteomics analytical method is required. The acquired thus knowledge will lead to the…”
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Meiosis and small ubiquitin‐related modifier (SUMO)‐conjugating enzyme, Ubc9 by Sakaguchi, Kengo, Koshiyama, Akiyo, Iwabata, Kazuki

“…In this review, we describe the role of a small ubiquitin‐like protein modifier (SUMO)‐conjugating protein, Ubc9, in synaptonemal complex formation during…”
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Knockdown of LIM15/DMC1 in the mushroom Coprinus cinereus by double-stranded RNA-mediated gene silencing by Namekawa, Satoshi H, Iwabata, Kazuki, Sugawara, Hiroko, Hamada, Fumika N, Koshiyama, Akiyo, Chiku, Hiroyuki, Kamada, Takashi, Sakaguchi, Kengo

“…1 Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, Noda, Chiba, 278-8510, Japan 2 Department of…”
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Coprinus cinereus Mer3 is required for synaptonemal complex formation during meiosis by Sugawara, Hiroko, Iwabata, Kazuki, Koshiyama, Akiyo, Yanai, Takuro, Daikuhara, Yoko, Namekawa, Satoshi H, Hamada, Fumika N, Sakaguchi, Kengo

“…Mer3 is an evolutionarily conserved DNA helicase that has crucial roles in meiotic recombination and crossover formation. We have identified the MER3 homolog…”
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Liquid chromatographic separation of proteins derivatized with a fluorogenic reagent at cysteinyl residues on a non-porous column for differential proteomics analysis by Koshiyama, Akiyo, Ichibangase, Tomoko, Moriya, Kyoji, Koike, Kazuhiko, Yazawa, Itaru, Imai, Kazuhiro

“…A wide-pore (30 nm) reversed-phase column (Intrada WP-RP, particle size 3 μm) was recently utilized for protein separation in differential proteomics analysis…”
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Alteration of intracellular secretory acute phase response proteins expressed in human hepatocyte induced by exposure with interleukin-6 by Nakata, Katsunori, Saitoh, Ryoichi, Amano, Jun, Koshiyama, Akiyo, Ichibangase, Tomoko, Murao, Naoaki, Ohta, Kunihiro, Aso, Yoshinori, Ishigai, Masaki, Imai, Kazuhiro

“…► We adopted the FD-LC-MS/MS method to reveal proteomics response to IL-6. ► The temporal altered expressions of intracellular acute phase proteins were…”
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REVIEW ARTICLE: Meiosis and small ubiquitin-related modifier (SUMO)-conjugating enzyme, Ubc9 by Sakaguchi, Kengo, Koshiyama, Akiyo, Iwabata, Kazuki

“…In this review, we describe the role of a small ubiquitin-like protein modifier (SUMO)-conjugating protein, Ubc9, in synaptonemal complex formation during…”
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Sumoylation of a meiosis‐specific RecA homolog, Lim15/Dmc1, via interaction with the small ubiquitin‐related modifier (SUMO)‐conjugating enzyme Ubc9 by Koshiyama, Akiyo, Hamada, Fumika N., Namekawa, Satoshi H., Iwabata, Kazuki, Sugawara, Hiroko, Sakamoto, Aiko, Ishizaki, Takashi, Sakaguchi, Kengo

“…Sumoylation is a post‐translational modification system that covalently attaches the small ubiquitin‐related modifier (SUMO) to target proteins. Ubc9 is…”
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Interaction between Lim15/Dmc1 and the homologue of the large subunit of CAF-1 - a molecular link between recombination and chromatin assembly during meiosis by Ishii, Satomi, Koshiyama, Akiyo, Hamada, Fumika N, Nara, Takayuki Y, Iwabata, Kazuki, Sakaguchi, Kengo, Namekawa, Satoshi H

“…In eukaryotes, meiosis leads to genetically variable gametes through recombination between homologous chromosomes of maternal and paternal origin. Chromatin…”
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DNA polymerase mu interacts with a meiosis-specific RecA homolog Lim15 during meiosis in Coprinus cinereus by Yanai, Takuro, Sakamoto, Aiko, Iwabata, Kazuki, Koshiyama, Akiyo, Sugawara, Hiroko, Nara, Takayuki, Takakusagi, Yoichi, Sakaguchi, Kengo

“…Meiosis is a fundamental process in eukaryotes. Homologous chromosomes are paired and recombined during meiotic prophase I, which results in variation among…”
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Two X family DNA polymerases, λ and μ, in meiotic tissues of the basidiomycete, Coprinus cinereus by Sakamoto, Aiko, Iwabata, Kazuki, Koshiyama, Akiyo, Sugawara, Hiroko, Yanai, Takuro, Kanai, Yoshihiro, Takeuchi, Ryo, Daikuhara, Yoko, Takakusagi, Yoichi, Sakaguchi, Kengo

“…The X family DNA polymerases λ (CcPolλ) and μ (CcPolμ) were shown to be expressed during meiotic prophase in the basidiomycete, Coprinus cinereus. These two…”
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Proliferating cell nuclear antigen (PCNA) interacts with a meiosis-specific RecA homologues, Lim15/Dmc1, but does not stimulate its strand transfer activity by Hamada, Fumika N., Koshiyama, Akiyo, Namekawa, Satoshi H., Ishii, Satomi, Iwabata, Kazuki, Sugawara, Hiroko, Nara, Takayuki Y., Sakaguchi, Kengo, Sawado, Tomoyuki

“…PCNA is a multi-functional protein that is involved in various nuclear events. Here we show that PCNA participates in events occurring during early meiotic…”
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Two X family DNA polymerases, [lambda] and [mu], in meiotic tissues of the basidiomycete, Coprinus cinereus by Sakamoto, Aiko, Iwabata, Kazuki, Koshiyama, Akiyo, Sugawara, Hiroko, Yanai, Takuro, Kanai, Yoshihiro, Takeuchi, Ryo, Daikuhara, Yoko, Takakusagi, Yoichi, Sakaguchi, Kengo

“…The X family DNA polymerases λ (CcPolλ) and μ (CcPolμ) were shown to be expressed during meiotic prophase in the basidiomycete, Coprinus cinereus. These two…”
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DNA topoisomerase II interacts with Lim15/Dmc1 in meiosis by Iwabata, Kazuki, Koshiyama, Akiyo, Yamaguchi, Taiki, Sugawara, Hiroko, Hamada, Fumika N., Namekawa, Satoshi H., Ishii, Satomi, Ishizaki, Takashi, Chiku, Hiroyuki, Nara, Takayuki, Sakaguchi, Kengo

“…Lim15/Dmc1 is a meiosis specific RecA-like protein. Here we propose its participation in meiotic chromosome pairing-related events along with DNA topoisomerase…”
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Expression of flap endonuclease-1 during meiosis in a basidiomycete, Coprinus cinereus by Yamaguchi, Taiki, Namekawa, Satoshi H., Hamada, Fumika N., Kasai, Nobuyuki, Nara, Takayuki, Watanabe, Kei, Iwabata, Kazuki, Ishizaki, Takashi, Ishii, Satomi, Koshiyama, Akiyo, Inagaki, Sachiyo, Kimura, Seisuke, Sakaguchi, Kengo

“…In the basidiomycete Coprinus cinereus ( C. cinereus), which shows a highly synchronous meiotic cell cycle, the meiotic prophase I cells demonstrate flap…”
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Coprinus cinereus DNA ligase I during meiotic development by Namekawa, Satoshi, Hamada, Fumika, Ishii, Satomi, Ichijima, Yosuke, Yamaguchi, Taiki, Nara, Takayuki, Kimura, Seisuke, Ishizaki, Takashi, Iwabata, Kazuki, Koshiyama, Akiyo, Teraoka, Hirobumi, Sakaguchi, Kengo

“…DNA ligase I is thought to be essential for DNA replication, repair and recombination, at least in the mitotic cell cycle, but whether this is also the case…”
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