Search Results - "Kolenda, Rafał"

Profiling of the Helicobacter pylori redox switch HP1021 regulon using a multi-omics approach by Noszka, Mateusz, Strzałka, Agnieszka, Muraszko, Jakub, Kolenda, Rafał, Meng, Chen, Ludwig, Christina, Stingl, Kerstin, Zawilak-Pawlik, Anna

“…The gastric human pathogen Helicobacter pylori has developed mechanisms to combat stress factors, including reactive oxygen species (ROS). Here, we present a…”
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adhesiomeR: a tool for Escherichia coli adhesin classification and analysis by Sidorczuk, Katarzyna, Burdukiewicz, Michał, Cerk, Klara, Fritscher, Joachim, Kingsley, Robert A, Schierack, Peter, Hildebrand, Falk, Kolenda, Rafał

“…Adhesins are crucial factors in the virulence of bacterial pathogens such as Escherichia coli. However, to date no resources have been dedicated to the…”
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Adhesion of Enteropathogenic, Enterotoxigenic, and Commensal Escherichia coli to the Major Zymogen Granule Membrane Glycoprotein 2 by Bartlitz, Christin, Kolenda, Rafał, Chilimoniuk, Jarosław, Grzymajło, Krzysztof, Rödiger, Stefan, Bauerfeind, Rolf, Ali, Aamir, Tchesnokova, Veronika, Roggenbuck, Dirk, Schierack, Peter

“…Pathogenic bacteria, such as enteropathogenic Escherichia coli (EPEC) and enterotoxigenic E. coli (ETEC), cause diarrhea in mammals. In particular, E. coli…”
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imputomics: web server and R package for missing values imputation in metabolomics data by Chilimoniuk, Jarosław, Grzesiak, Krystyna, Kała, Jakub, Nowakowski, Dominik, Krętowski, Adam, Kolenda, Rafał, Ciborowski, Michał, Burdukiewicz, Michał

“…Abstract Motivation Missing values are commonly observed in metabolomics data from mass spectrometry. Imputing them is crucial because it assures data…”
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The role of AJB35136 and fdtA genes in biofilm formation by avian pathogenic Escherichia coli by Khan, Muhammad Moman, Ali, Aamir, Kolenda, Rafał, Olowe, Olugbenga Adekunle, Weinreich, Jörg, Li, Ganwu, Schierack, Peter

“…Abstract Background Infections caused by avian pathogenic Escherichia coli (APEC) result in significant economic losses in poultry industry. APEC strains are…”
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Membrane properties modulation by SanA: implications for xenobiotic resistance in Salmonella Typhimurium by Aleksandrowicz, Adrianna, Kolenda, Rafał, Baraniewicz, Karolina, Thurston, Teresa L M, Suchański, Jarosław, Grzymajlo, Krzysztof

“…Multidrug resistance in bacteria is a pressing concern, particularly among clinical isolates. Gram-negative bacteria like employ various strategies, such as…”
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FdeC expression regulates motility and adhesion of the avian pathogenic Escherichia coli strain IMT5155 by Aleksandrowicz, Adrianna, Kjærup, Rikke Brødsgaard, Grzymajło, Krzysztof, Martinez, Fernando Garcia, Muñoz, Javier, Borowska, Dominika, Sives, Samantha, Vervelde, Lonneke, Dalgaard, Tina Sørensen, Kingsley, Robert A, Kolenda, Rafał

“…Adaptation of avian pathogenic E. coli (APEC) to changing host environments including virulence factors expression is vital for disease progression. FdeC is an…”
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Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data by Sidorczuk, Katarzyna, Gagat, Przemysław, Pietluch, Filip, Kała, Jakub, Rafacz, Dominik, Bąkała, Laura, Słowik, Jadwiga, Kolenda, Rafał, Rödiger, Stefan, Fingerhut, Legana C H W, Cooke, Ira R, Mackiewicz, Paweł, Burdukiewicz, Michał

“…Abstract Antimicrobial peptides (AMPs) are a heterogeneous group of short polypeptides that target not only microorganisms but also viruses and cancer cells…”
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Genomic and functional characterization of five novel Salmonella-targeting bacteriophages by Kuźmińska-Bajor, Marta, Śliwka, Paulina, Ugorski, Maciej, Korzeniowski, Paweł, Skaradzińska, Aneta, Kuczkowski, Maciej, Narajaczyk, Magdalena, Wieliczko, Alina, Kolenda, Rafał

“…The host-unrestricted, non-typhoidal Salmonella enterica serovar Enteritidis (S. Enteritidis) and the serovar Typhimurium (S. Typhimurium) are major causative…”
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A systematic review and meta-analysis of the epidemiology of pathogenic Escherichia coli of calves and the role of calves as reservoirs for human pathogenic E. coli by Kolenda, Rafał, Burdukiewicz, Michał, Schierack, Peter

“…Escherichia coli bacteria are the most common causes of diarrhea and septicemia in calves. Moreover, calves form a major reservoir for transmission of…”
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Collateral sensitivity increases the efficacy of a rationally designed bacteriophage combination to control Salmonella enterica by Acton, Luke, Pye, Hannah V, Thilliez, Gaëtan, Kolenda, Rafał, Matthews, Michaela, Turner, A Keith, Yasir, Muhammad, Holden, Emma, Al-Khanaq, Haider, Webber, Mark, Adriaenssens, Evelien M, Kingsley, Robert A

“…The ability of virulent bacteriophages to lyse bacteria influences bacterial evolution, fitness, and population structure. Knowledge of both host…”
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Identification of Natural Mutations Responsible for Altered Infection Phenotypes of Salmonella enterica Clinical Isolates by Using Cell Line Infection Screens by Kolenda, Rafał, Burdukiewicz, Michał, Wimonć, Marcjanna, Aleksandrowicz, Adrianna, Ali, Aamir, Szabo, Istvan, Tedin, Karsten, Bartholdson Scott, Josefin, Pickard, Derek, Schierack, Peter

“…The initial steps of pathogenesis involve adhesion to and invasion into host epithelial cells. While well-studied for serovar Typhimurium, the factors…”
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Application of Loop-Mediated Isothermal Amplification (LAMP) in Sex Identification of Parrots Bred in Egypt by Elnomrosy, Sara M, Hagag, Naglaa M, AbdAllah, Mohamed I, Kolenda, Rafał, Zacharski, Maciej

“…Over 400 of the 3800 tropical avian species are endangered or threatened. One of many solutions to conserve animal biodiversity is breeding animals in zoos or…”
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Characterization of clumpy adhesion of Escherichia coli to human cells and associated factors influencing antibiotic sensitivity by Khan, Muhammad Moman, Sidorczuk, Katarzyna, Becker, Juliane, Aleksandrowicz, Adrianna, Baraniewicz, Karolina, Ludwig, Christina, Ali, Aamir, Kingsley, Robert A, Schierack, Peter, Kolenda, Rafał

“…intestinal infection pathotypes are characterized by distinct adhesion patterns, including the recently described clumpy adhesion phenotype. Here, we identify…”
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Adhesion of Salmonella to Pancreatic Secretory Granule Membrane Major Glycoprotein GP2 of Human and Porcine Origin Depends on FimH Sequence Variation by Kolenda, Rafał, Burdukiewicz, Michał, Schiebel, Juliane, Rödiger, Stefan, Sauer, Lysann, Szabo, Istvan, Orłowska, Aleksandra, Weinreich, Jörg, Nitschke, Jörg, Böhm, Alexander, Gerber, Ulrike, Roggenbuck, Dirk, Schierack, Peter

“…Bacterial host tropism is a primary determinant of the range of host organisms they can infect. serotypes are differentiated into host-restricted and…”
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Mucosal Autoimmunity to Cell-Bound GP2 Isoforms Is a Sensitive Marker in PSC and Associated With the Clinical Phenotype by Sowa, Mandy, Kolenda, Rafał, Baumgart, Daniel C, Pratschke, Johann, Papp, Maria, Tornai, Tamas, Suchanski, Jaroslaw, Bogdanos, Dimitrios P, Mytilinaiou, Maria G, Hammermann, Jutta, Laass, Martin W, Conrad, Karsten, Schramm, Christoph, Franke, Andre, Roggenbuck, Dirk, Schierack, Peter

“…Zymogen granule glycoprotein 2 (GP2) was demonstrated as first autoimmune mucosal target in primary sclerosing cholangitis (PSC) associated with disease…”
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Expression of metallothionein in the liver and kidneys of the red deer (Cervus elaphus L.) from an industrial metal smelting area of Poland by Durkalec, Maciej, Kolenda, Rafał, Owczarek, Tomasz, Szkoda, Józef, Nawrocka, Agnieszka, Grzegrzółka, Jędrzej, Dzięgiel, Piotr, Socha, Piotr, Kołacz, Roman, Schierack, Peter, Żmudzki, Jan, Posyniak, Andrzej

“…The metallothionein 1 (MT1) coding sequence of red deer was identified and compared to orthologous sequences from other mammals. Over 90% identity was observed…”
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FimH adhesin from host unrestricted Salmonella Enteritidis binds to different glycoprotein ligands expressed by enterocytes from sheep, pig and cattle than FimH adhesins from host restricted Salmonella Abortus-ovis, Salmonella Choleraesuis and Salmonella Dublin by Grzymajło, Krzysztof, Ugorski, Maciej, Kolenda, Rafał, Kędzierska, Anna, Kuźmińska-Bajor, Marta, Wieliczko, Alina

“…Adhesion to gut tissues and colonization of the alimentary tract, two important stages in the pathogenesis of Salmonella, are mediated by FimH adhesin of type…”
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Primary pulmonary adenocarcinoma in roe deer – a case report by BEDNARSKI, MICHAŁ, WIMONĆ, MARCJANNA, KOLENDA, RAFAŁ, WLEKLIŃSKI, EDMUND, KRÓL, DAWID, HOUSZKA, MAREK

“…Lung adenocarcinoma develops after the neoplastic transformation of pneumocytes or bronchial epithelium. It is chronic and slowly progressive in nature and the…”
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Whatever makes them stick – Adhesins of avian pathogenic Escherichia coli by Aleksandrowicz, Adrianna, Khan, Muhammad Moman, Sidorczuk, Katarzyna, Noszka, Mateusz, Kolenda, Rafał

“…[Display omitted] •Avian Pathogenic Eschierchia coli (APEC) is the cause of colibacteriosis in poultry.•Initial attachment or adhesion to host cells is vital…”
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