Search Results - "Knapp, Jennifer J"

Reconstructing SARS-CoV-2 lineages from mixed wastewater sequencing data by Ellmen, Isaac, Overton, Alyssa K., Knapp, Jennifer J., Nash, Delaney, Ho, Hannifer, Hungwe, Yemurayi, Prasla, Samran, Nissimov, Jozef I., Charles, Trevor C.

“…Wastewater surveillance of SARS-CoV-2 has emerged as a critical tool for tracking the spread of COVID-19. In addition to estimating the relative case numbers…”
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A Comprehensive, Flexible Collection of SARS-CoV-2 Coding Regions by Kim, Dae-Kyum, Knapp, Jennifer J, Kuang, Da, Chawla, Aditya, Cassonnet, Patricia, Lee, Hunsang, Sheykhkarimli, Dayag, Samavarchi-Tehrani, Payman, Abdouni, Hala, Rayhan, Ashyad, Li, Roujia, Pogoutse, Oxana, Coyaud, Étienne, van der Werf, Sylvie, Demeret, Caroline, Gingras, Anne-Claude, Taipale, Mikko, Raught, Brian, Jacob, Yves, Roth, Frederick P

“…The world is facing a global pandemic of COVID-19 caused by the SARS-CoV-2 coronavirus. Here we describe a collection of codon-optimized coding sequences for…”
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A Novel Tiled Amplicon Sequencing Assay Targeting the Tomato Brown Rugose Fruit Virus (ToBRFV) Genome Reveals Widespread Distribution in Municipal Wastewater Treatment Systems in the Province of Ontario, Canada by Nash, Delaney, Ellmen, Isaac, Knapp, Jennifer J, Menon, Ria, Overton, Alyssa K, Cheng, Jiujun, Lynch, Michael D J, Nissimov, Jozef I, Charles, Trevor C

“…Tomato Brown Rugose Fruit Virus (ToBRFV) is a plant pathogen that infects important crop species and can dramatically reduce tomato crop yields. The ToBRFV has…”
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A resource of human coronavirus protein-coding sequences in a flexible, multipurpose Gateway Entry clone collection by Weller, Benjamin, Lin, Chung-Wen, Pogoutse, Oxana, Sauer, Mayra, Marin-de la Rosa, Nora, Strobel, Alexandra, Young, Veronika, Knapp, Jennifer J, Rayhan, Ashyad, Falter, Claudia, Kim, Dae-Kyum, Roth, Frederick P, Falter-Braun, Pascal

“…Abstract The COVID-19 pandemic has catalyzed unprecedented scientific data and reagent sharing and collaboration, which enabled understanding the virology of…”
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Pooled‐matrix protein interaction screens using Barcode Fusion Genetics by Yachie, Nozomu, Petsalaki, Evangelia, Mellor, Joseph C, Weile, Jochen, Jacob, Yves, Verby, Marta, Ozturk, Sedide B, Li, Siyang, Cote, Atina G, Mosca, Roberto, Knapp, Jennifer J, Ko, Minjeong, Yu, Analyn, Gebbia, Marinella, Sahni, Nidhi, Yi, Song, Tyagi, Tanya, Sheykhkarimli, Dayag, Roth, Jonathan F, Wong, Cassandra, Musa, Louai, Snider, Jamie, Liu, Yi‐Chun, Yu, Haiyuan, Braun, Pascal, Stagljar, Igor, Hao, Tong, Calderwood, Michael A, Pelletier, Laurence, Aloy, Patrick, Hill, David E, Vidal, Marc, Roth, Frederick P

“…High‐throughput binary protein interaction mapping is continuing to extend our understanding of cellular function and disease mechanisms. However, we remain…”
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A comprehensive two-hybrid analysis to explore the Legionella pneumophila effector–effector interactome by Mount, Harley O'Connor, Urbanus, Malene L., Sheykhkarimli, Dayag, Coté, Atina G., Laval, Florent, Coppin, Georges, Kishore, Nishka, Li, Roujia, Spirohn-Fitzgerald, Kerstin, Petersen, Morgan O., Knapp, Jennifer J., Kim, Dae-Kyum, Twizere, Jean-Claude, Calderwood, Michael A., Vidal, Marc, Roth, Frederick P., Ensminger, Alexander W.

“…Legionella pneumophila uses over 300 translocated effector proteins to rewire host cells during infection and create a replicative niche for intracellular…”
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Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data by Sutcliffe, Steven G, Kraemer, Susanne A, Ellmen, Isaac, Knapp, Jennifer J, Overton, Alyssa K, Nash, Delaney, Nissimov, Jozef I, Charles, Trevor C, Dreifuss, David, Topolsky, Ivan, Baykal, Pelin I, Fuhrmann, Lara, Jablonski, Kim P, Beerenwinkel, Niko, Levy, Joshua I, Olabode, Abayomi S, Becker, Devan G, Gugan, Gopi, Brintnell, Erin, Poon, Art F Y, Valieris, Renan, Drummond, Rodrigo D, Defelicibus, Alexandre, Dias-Neto, Emmanuel, Rosales, Rafael A, Tojal da Silva, Israel, Orfanou, Aspasia, Psomopoulos, Fotis, Pechlivanis, Nikolaos, Pipes, Lenore, Chen, Zihao, Baaijens, Jasmijn A, Baym, Michael, Shapiro, B Jesse

“…Wastewater-based surveillance (WBS) is an important epidemiological and public health tool for tracking pathogens across the scale of a building,…”
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Real-time evaluation of signal accuracy in wastewater surveillance of pathogens with high rates of mutation by Thakali, Ocean, Mercier, Élisabeth, Eid, Walaa, Wellman, Martin, Brasset-Gorny, Julia, Overton, Alyssa K., Knapp, Jennifer J., Manuel, Douglas, Charles, Trevor C., Goodridge, Lawrence, Arts, Eric J., Poon, Art F. Y., Brown, R. Stephen, Graber, Tyson E., Delatolla, Robert, DeGroot, Christopher T.

“…Wastewater surveillance of coronavirus disease 2019 (COVID-19) commonly applies reverse transcription-quantitative polymerase chain reaction (RT-qPCR) to…”
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Next-generation large-scale binary protein interaction network for Drosophila melanogaster by Tang, Hong-Wen, Spirohn, Kerstin, Hu, Yanhui, Hao, Tong, Kovács, István A., Gao, Yue, Binari, Richard, Yang-Zhou, Donghui, Wan, Kenneth H., Bader, Joel S., Balcha, Dawit, Bian, Wenting, Booth, Benjamin W., Coté, Atina G., de Rouck, Steffi, Desbuleux, Alice, Goh, Kah Yong, Kim, Dae-Kyum, Knapp, Jennifer J., Lee, Wen Xing, Lemmens, Irma, Li, Cathleen, Li, Mian, Li, Roujia, Lim, Hyobin Julianne, Liu, Yifang, Luck, Katja, Markey, Dylan, Pollis, Carl, Rangarajan, Sudharshan, Rodiger, Jonathan, Schlabach, Sadie, Shen, Yun, Sheykhkarimli, Dayag, TeeKing, Bridget, Roth, Frederick P., Tavernier, Jan, Calderwood, Michael A., Hill, David E., Celniker, Susan E., Vidal, Marc, Perrimon, Norbert, Mohr, Stephanie E.

“…Generating reference maps of interactome networks illuminates genetic studies by providing a protein-centric approach to finding new components of existing…”
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Genomic surveillance of Canadian airport wastewater samples allows early detection of emerging SARS-CoV-2 lineages by Overton, Alyssa K., Knapp, Jennifer J., Lawal, Opeyemi U., Gibson, Richard, Fedynak, Anastasia A., Adebiyi, Adebowale I., Maxwell, Brittany, Cheng, Lydia, Bee, Carina, Qasim, Asim, Atanas, Kyle, Payne, Mark, Stuart, Rebecca, Fleury, Manon D., Knox, Natalie C., Nash, Delaney, Hungwe, Yemurayi C., Prasla, Samran R., Ho, Hannifer, Agboola, Simininuoluwa O., Kwon, Su-Hyun, Naik, Shiv, Parreira, Valeria R., Rizvi, Fozia, Precious, Melinda J., Thomas, Steven, Zambrano, Marcos, Fang, Vixey, Gilliland, Elaine, Varia, Monali, Horn, Maureen, Landgraff, Chrystal, Arts, Eric J., Goodridge, Lawrence, Becker, Devan, Charles, Trevor C.

“…The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has shown wastewater (WW) surveillance to be an effective means of tracking the…”
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Evaluation of three (Z)-9-tricosene formulations for control of Musca domestica (Diptera: Muscidae) in caged-layer poultry units by CHAPMAN, J. W, HOWSE, P. E, KNAPP, J. J, GOULSON, D

“…A field trial comparing the effectiveness of toxic targets impregnated with different formulations of the Musca domestica L. female sex pheromone…”
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An evaluation of (Z)-9-tricosene and food odours for attracting house flies, Musca domestica, to baited targets in deep-pit poultry units by Chapman, J.W. (Southampton Univ., Southampton, Hants. (United Kingdom). School of Biological Sciences, Div. of Biodiversity and Ecology), Knapp, J.J, Howse, P.E, Goulson, D

“…Field trials investigating the effect of food baits on catches of Musca domestica at toxic targets impregnated with the female sex pheromone, (Z)‐9‐tricosene,…”
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A reference map of the human protein interactome by Luck, Katja, Kim, Dae-Kyum, Lambourne, Luke, Spirohn, Kerstin, Begg, Bridget E, Bian, Wenting, Brignall, Ruth, Cafarelli, Tiziana, Campos-Laborie, Francisco J, Charloteaux, Benoit, Choi, Dongsic, Cote, Atina G, Daley, Meaghan, Deimling, Steven, Desbuleux, Alice, Dricot, Amélie, Gebbia, Marinella, Hardy, Madeleine F, Kishore, Nishka, Knapp, Jennifer J, Kovács, István A., Lemmens, Irma, Mee, Miles W., Mellor, Joseph C, Pollis, Carl, Pons, Carles, Richardson, Aaron D, Schlabach, Sadie, Teeking, Bridget, Yadav, Anupama, Babor, Mariana, Balcha, Dawit, Basha, Omer, Bowman-Colin, Christian, Chin, Suet-Feung, Choi, Soon Gang, Colabella, Claudia, Coppin, Georges, d'Amata, Cassandra, de Ridder, David, de Rouck, Steffi, Duran-Frigola, Miquel, Ennajdaoui, Hanane, Goebels, Florian, Goehring, Liana, Gopal, Anjali, Haddad, Ghazal, Hatchi, Elodie, Helmy, Mohamed, Jacob, Yves, Kassa, Yoseph, Landini, Serena, Li, Roujia, van Lieshout, Natascha, Macwilliams, Andrew, Markey, Dylan, Paulson, Joseph N, Rangarajan, Sudharshan, Rasla, John, Rayhan, Ashyad, Rolland, Thomas, San-Miguel, Adriana, Shen, Yun, Sheykhkarimli, Dayag, Sheynkman, Gloria M, Simonovsky, Eyal, Taşan, Murat, Tejeda, Alexander, Twizere, Jean-Claude, Wang, Yang, Weatheritt, Robert J, Weile, Jochen, Xia, Yu, Yang, Xinping, Yeger-Lotem, Esti, Zhong, Quan, Aloy, Patrick, Bader, Gary D, de Las Rivas, Javier, Gaudet, Suzanne, Hao, Tong, Rak, Janusz, Tavernier, Jan, Tropepe, Vincent, Hill, David E, Vidal, Marc, Roth, Frederick P, Calderwood, Michael A

“…Global insights into cellular organization and function require comprehensive understanding of interactome networks. Similar to how a reference genome sequence…”
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