Search Results - "Knapp, Adam C."

Computational Modeling of Macrophage Iron Sequestration during Host Defense against Aspergillus by Adhikari, Bandita, Scindia, Yogesh, Sordo Vieira, Luis, de Assis Lopes Ribeiro, Henrique, Masison, Joseph, Yang, Ning, Fonseca, Luis L., Wheeler, Matthew, Knapp, Adam C., Mei, Yu, Helba, Brian, Atkinson, Carl, Schroeder, Will, Mehrad, Borna, Laubenbacher, Reinhard

“…Iron is essential to the virulence of Aspergillus species, and restricting iron availability is a critical mechanism of antimicrobial host defense. Macrophages…”
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SteadyCellPhenotype: a web-based tool for the modeling of biological networks with ternary logic by Knapp, Adam C, Sordo Vieira, Luis, Laubenbacher, Reinhard, Chifman, Julia

“…Abstract Summary We introduce SteadyCellPhenotype, a browser-based interface for the analysis of ternary biological networks. It includes tools for…”
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Cyclone: open-source package for simulation and analysis of finite dynamical systems by Dimitrova, Elena S, Knapp, Adam C, Stigler, Brandilyn, Stillman, Michael E

“…Abstract Motivation While there are software packages that analyze Boolean, ternary, or other multi-state models, none compute the complete state space of…”
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Beyond braid statistics: Constructing a lattice model for anyons with exchange statistics intrinsic to one dimension by Nagies, Sebastian, Wang, Botao, Knapp, Adam C., Eckardt, André, Harshman, Nathan L.

“…Anyons obeying fractional exchange statistics arise naturally in two dimensions: Hard-core two-body constraints make the configuration space of particles not…”
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Symplectic Structures on the Cotangent Bundles of Open 4-Manifolds by Knapp, Adam C.

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Lagrangian tori in closed 4-manifolds by Knapp, Adam C.

“…We use a result of Chekanov to obtain examples of smoothly but not symplectically isotopic Lagrangian tori in closed simply connected symplectic 4-manifolds…”
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EFECT -- A Method and Metric to Assess the Reproducibility of Stochastic Simulation Studies by Sego, T. J, König, Matthias, Fonseca, Luis L, Fain, Baylor, Knapp, Adam C, Tiwari, Krishna, Hermjakob, Henning, Sauro, Herbert M, Glazier, James A, Laubenbacher, Reinhard C, Malik-Sheriff, Rahuman S

“…Reproducibility is a foundational standard for validating scientific claims in computational research. Stochastic computational models are employed across…”
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Invariants of Montesinos Twins by Knapp, Adam C

“…C. Giller proposed an invariant of ribbon 2-knots in S^4 based on a type of skein relation for a projection to R^3. In certain cases, this invariant is equal…”
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Computations of Floer homology and gauge theoretic invariants for Montesinos twins by Knapp, Adam C

“…I compute the Lagrangian Floer cohomology groups of certain tori in closed simply connected symplectic 4-manifolds arising from Fintushel - Stern knot/link…”
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