Search Results - "Kircheva, Nikoleta"
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Carbonic Anhydrases: Different Active Sites, Same Metal Selectivity Rules
Published in Molecules (Basel, Switzerland) (26-04-2024)“…Carbonic anhydrases are mononuclear metalloenzymes catalyzing the reversible hydration of carbon dioxide in organisms belonging to all three domains of life…”
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Lanthanides as Calcium Mimetic Species in Calcium-Signaling/Buffering Proteins: The Effect of Lanthanide Type on the Ca2+/Ln3+ Competition
Published in International journal of molecular sciences (27-03-2023)“…Lanthanides, the 14 4f-block elements plus Lanthanum, have been extensively used to study the structure and biochemical properties of metalloproteins. The…”
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Metal-Assisted Complexation of Fluorogenic Dyes by Cucurbit[7]uril and Cucurbit[8]uril: A DFT Evaluation of the Key Factors Governing the Host-Guest Recognition
Published in Molecules (Basel, Switzerland) (05-02-2023)“…With the emergence of host-guest systems, a novel branch of complexation chemistry has found wide application in industries such as food, pharmacy, medicine,…”
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N -Methyl- and N -Phenylpiperazine Functionalized Styryl Dyes Inside Cucurbiturils: Theoretical Assessment of the Factors Governing the Host-Guest Recognition
Published in Molecules (Basel, Switzerland) (16-12-2023)“…The family of cucurbiturils (CBs), the unique pumpkin-shaped macrocycles, has received great attention over the past four decades owing to their remarkable…”
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Theoretical Assessment of the Ligand/Metal/Quadruplex Recognition in the Non-Canonical Nucleic Acids Structures
Published in Molecules (Basel, Switzerland) (17-08-2023)“…Quadruplexes (GQs), peculiar DNA/RNA motifs concentrated in specific genomic regions, play a vital role in biological processes including telomere stability…”
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Density Functional Theory Prediction of Laser Dyes-Cucurbit[7]uril Binding Affinities
Published in Molecules (Basel, Switzerland) (01-09-2024)“…Among a variety of diverse host molecules distinguished by specific characteristics, the cucurbit[n]uril (CB) family stands out, being widely known for the…”
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Complexation of trivalent metal cations (Al 3+ , Ga 3+ , In 3+ , La 3+ , Lu 3+ ) to cucurbiturils: a DFT/SMD evaluation of the key factors governing the host-guest recognition
Published in Physical chemistry chemical physics : PCCP (09-03-2022)“…Cucurbiturils (CBs), the pumpkin-shaped macrocycles, are suitable hosts for an array of neutral and cationic species. A plethora of host-guest complexes…”
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Naphthalimide-Based Amphiphiles: Synthesis and DFT Studies of the Aggregation and Interaction of a Simplified Model System with Water Molecules
Published in Molecules (Basel, Switzerland) (04-09-2024)“…Systems containing amphiphilic/pathic molecules have the tremendous capacity to self-assemble under appropriate conditions to form morphologies with…”
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In Silico Analysis of the Ga3+/Fe3+ Competition for Binding the Iron-Scavenging Siderophores of P. aeruginosa—Implementation of Three Gallium-Based Complexes in the “Trojan Horse” Antibacterial Strategy
Published in Biomolecules (Basel, Switzerland) (16-04-2024)“…The emergence of multidrug-resistant (MDR) microorganisms combined with the ever-draining antibiotic pipeline poses a disturbing and immensely growing public…”
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Cu + /Ag + Competition in Type I Copper Proteins (T1Cu)
Published in Biomolecules (Basel, Switzerland) (01-04-2023)“…Due to the similarity in the basic coordination behavior of their mono-charged cations, silver biochemistry is known to be linked to that of copper in…”
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Spasmolytic Activity and Anti-Inflammatory Effect of Novel Mebeverine Derivatives
Published in Biomedicines (12-10-2024)“…: Irritable bowel syndrome (IBS) has a major negative influence on quality of life, causing cramps, stomach pain, bloating, constipation, etc. Antispasmodics…”
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Strontium Binding to α-Parvalbumin, a Canonical Calcium-Binding Protein of the “EF-Hand” Family
Published in Biomolecules (Basel, Switzerland) (05-08-2021)“…Strontium salts are used for treatment of osteoporosis and bone cancer, but their impact on calcium-mediated physiological processes remains obscure. To…”
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Gallium as an Antibacterial Agent: A DFT/SMD Study of the Ga3+/Fe3+ Competition for Binding Bacterial Siderophores
Published in Inorganic chemistry (04-05-2020)“…The urgency of finding novel antibacterial drugs (not only antibiotics), exhibiting different mechanisms of therapeutic action, is significant and has served…”
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Novel Insights into Gallium’s Mechanism of Therapeutic Action: A DFT/PCM Study of the Interaction between Ga3+ and Ribonucleotide Reductase Substrates
Published in The journal of physical chemistry. B (05-07-2019)“…The broadly accepted mechanism of gallium’s therapeutic action postulates the inactivation of the upregulated/hyperactive enzyme ribonucleotide reductase (RNR)…”
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Competition between abiogenic and biogenic metal cations in biological systems: Mechanisms of gallium‘s anticancer and antibacterial effect
Published in Journal of inorganic biochemistry (01-01-2021)“…Metal cations are key players in a plethora of essential biological processes. Over the course of evolution specific biological functions have been bestowed…”
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Gallium as an Antibacterial Agent: A DFT/SMD Study of the Ga 3+ /Fe 3+ Competition for Binding Bacterial Siderophores
Published in Inorganic chemistry (04-05-2020)“…The urgency of finding novel antibacterial drugs (not only antibiotics), exhibiting different mechanisms of therapeutic action, is significant and has served…”
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Novel Insights into Gallium's Mechanism of Therapeutic Action: A DFT/PCM Study of the Interaction between Ga 3+ and Ribonucleotide Reductase Substrates
Published in The journal of physical chemistry. B (05-07-2019)“…The broadly accepted mechanism of gallium's therapeutic action postulates the inactivation of the upregulated/hyperactive enzyme ribonucleotide reductase (RNR)…”
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Theoretical Insight into the Phosphate-Targeted Silver’s Antibacterial Action: Differentiation between Gram (+) and Gram (−) Bacteria
Published in Inorganic chemistry (04-07-2022)“…Although silver is one of the first metals finding broad applications in everyday life, specific key points of the intimate mechanism of its…”
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Holo-chromodulin: competition between the native Cr3+ and other biogenic cations (Fe3+, Fe2+, Mg2+, and Zn2+) for the binding sites
Published in Metallomics (27-10-2022)“…Chromodulin is an oligopeptide that has an essential role for the flawless functioning of insulin. Although the precise sequence of the constituent amino acid…”
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