Search Results - "Kim, Seungill"

Two different domain architectures generate structural and functional diversity among bZIP genes in the Solanaceae family by Choi, Jin-Wook, Kim, Ha-Eun, Kim, Seungill

“…The bZIP gene family is one of the largest transcription factor families and has important roles in plant growth, development, and stress responses. However,…”
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Identification of novel PHD-finger genes in pepper by genomic re-annotation and comparative analyses by Guk, Ji-Yoon, Jang, Min-Jeong, Kim, Seungill

“…The plant homeodomain (PHD)-finger gene family that belongs to zinc-finger genes, plays an important role in epigenetics by regulating gene expression in…”
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Expansion of sesquiterpene biosynthetic gene clusters in pepper confers nonhost resistance to the Irish potato famine pathogen by Lee, Hyun‐Ah, Kim, Sejun, Kim, Seungill, Choi, Doil

“…Chemical barriers contribute to nonhost resistance, which is defined as the resistance of an entire plant species to nonadapted pathogen species. However, the…”
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Identification and expression analyses of B3 genes reveal lineage-specific evolution and potential roles of REM genes in pepper by Park, Young-Soo, Cho, Hye Jeong, Kim, Seungill

“…The B3 gene family, one of the largest plant-specific transcription factors, plays important roles in plant growth, seed development, and hormones. However,…”
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Genome-Wide Comparative Analyses Reveal the Dynamic Evolution of Nucleotide-Binding Leucine-Rich Repeat Gene Family among Solanaceae Plants by Seo, Eunyoung, Kim, Seungill, Yeom, Seon-In, Choi, Doil

“…Plants have evolved an elaborate innate immune system against invading pathogens. Within this system, intracellular nucleotide-binding leucine-rich repeat…”
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An ultra-high-density bin map facilitates high-throughput QTL mapping of horticultural traits in pepper (Capsicum annuum) by Han, Koeun, Jeong, Hee-Jin, Yang, Hee-Bum, Kang, Sung-Min, Kwon, Jin-Kyung, Kim, Seungill, Choi, Doil, Kang, Byoung-Cheorl

“…Most agricultural traits are controlled by quantitative trait loci (QTLs); however, there are few studies on QTL mapping of horticultural traits in pepper…”
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De Novo Transcriptome Analysis to Identify Anthocyanin Biosynthesis Genes Responsible for Tissue-Specific Pigmentation in Zoysiagrass (Zoysia japonica Steud.) by Ahn, Jong Hwa, Kim, June-Sik, Kim, Seungill, Soh, Hye Yeon, Shin, Hosub, Jang, Hosung, Ryu, Ju Hyun, Kim, Ahyeong, Yun, Kil-Young, Kim, Shinje, Kim, Ki Sun, Choi, Doil, Huh, Jin Hoe

“…Zoysiagrass (Zoysia japonica Steud.) is commonly found in temperate climate regions and widely used for lawns, in part, owing to its uniform green color…”
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Comparative and expression analyses of AP2/ERF genes reveal copy number expansion and potential functions of ERF genes in Solanaceae by Choi, Jin-Wook, Choi, Hyeon Ho, Park, Young-Soo, Jang, Min-Jeong, Kim, Seungill

“…The AP2/ERF gene family is a superfamily of transcription factors that are important in the response of plants to abiotic stress and development. However,…”
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Comparative analysis of de novo genomes reveals dynamic intra-species divergence of NLRs in pepper by Kim, Myung-Shin, Chae, Geun Young, Oh, Soohyun, Kim, Jihyun, Mang, Hyunggon, Kim, Seungill, Choi, Doil

“…Abstract Background Peppers ( Capsicum annuum L.) containing distinct capsaicinoids are the most widely cultivated spices in the world. However, extreme…”
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Divergent evolution of multiple virus-resistance genes from a progenitor in Capsicum spp by Kim, Saet‐Byul, Kang, Won‐Hee, Huy, Hoang Ngoc, Yeom, Seon‐In, An, Jeong‐Tak, Kim, Seungill, Kang, Min‐Young, Kim, Hyun Jung, Jo, Yeong Deuk, Ha, Yeaseong, Choi, Doil, Kang, Byoung‐Cheorl

“…Plants have evolved hundreds of nucleotide-binding and leucine-rich domain proteins (NLRs) as potential intracellular immune receptors, but the evolutionary…”
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Major Quantitative Trait Loci and Putative Candidate Genes for Powdery Mildew Resistance and Fruit-Related Traits Revealed by an Intraspecific Genetic Map for Watermelon (Citrullus lanatus var. lanatus) by Kim, Kwang-Hwan, Hwang, Ji-Hyun, Han, Dong-Yeup, Park, Minkyu, Kim, Seungill, Choi, Doil, Kim, Yongjae, Lee, Gung Pyo, Kim, Sun-Tae, Park, Young-Hoon

“…An intraspecific genetic map for watermelon was constructed using an F2 population derived from 'Arka Manik' × 'TS34' and transcript sequence variants and…”
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Genomic and transcriptomic analyses highlight evolutionary and functional characteristics of WRKY genes in Asterids by Kim, Seo-Jin, Kim, Seyeon, Park, Young-Soo, Cho, Hye Jeong, Kim, Seungill

“…•Re-annotation identified 887 WRKY genes in nine Asterid species.•Domain architecture, phylogeny, and motif compositions revealed six WRKY subgroups.•WRKY…”
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RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome by Strauß, Tina, van Poecke, Remco M. P, Strauß, Annett, Römer, Patrick, Minsavage, Gerald V, Singh, Sylvia, Wolf, Christina, Strauß, Axel, Kim, Seungill, Lee, Hyun-Ah, Yeom, Seon-In, Parniske, Martin, Stall, Robert E, Jones, Jeffrey B, Choi, Doil, Prins, Marcel, Lahaye, Thomas

“…Transcription activator-like effector (TALE) proteins of the plant pathogenic bacterial genus Xanthomonas bind to and transcriptionally activate host…”
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The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper by Hwang, Dong-Gyu, Park, June Hyun, Lim, Jae Yun, Kim, Donghyun, Choi, Yourim, Kim, Soyoung, Reeves, Gregory, Yeom, Seon-In, Lee, Jeong-Soo, Park, Minkyu, Kim, Seungill, Choi, Ik-Young, Choi, Doil, Shin, Chanseok

“…MicroRNAs (miRNAs) are a class of non-coding RNAs approximately 21 nt in length which play important roles in regulating gene expression in plants. Although…”
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Functional genomics by integrated analysis of transcriptome of sweet potato (Ipomoea batatas (L.) Lam.) during root formation by Kim, Sujung, Nie, Hualin, Jun, Byungki, Kim, Jiseong, Lee, Jeongeun, Kim, Seungill, Kim, Ekyune, Kim, Sunhyung

“…Background Sweet potato is easily propagated by cuttings. But the molecular biological mechanism of adventitious root formation are not yet clear. Objective To…”
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Comparative Analysis of Re-Annotated Genes Provides Insight into Evolutionary Divergence and Expressions of Aquaporin Family in Pepper by Lee, Yeon Mi, Chae, Geun Young, Kim, Min Kyung, Kim, Seungill

“…Aquaporins (AQPs) are known to have a vital role in water transport in all living organisms including agriculturally important crops, but a comprehensive…”
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New role of LTR-retrotransposons for emergence and expansion of disease-resistance genes and high-copy gene families in plants by Kim, Seungill, Choi, Doil

“…Long terminal repeat retrotransposons (LTR-Rs) are major elements creating new genome structure for expansion of plant genomes. However, in addition to the…”
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Comparative analysis of pepper and tomato reveals euchromatin expansion of pepper genome caused by differential accumulation of Ty3/Gypsy-like elements by Park, Minkyu, Jo, SungHwan, Kwon, Jin-Kyung, Park, Jongsun, Ahn, Jong Hwa, Kim, Seungill, Lee, Yong-Hwan, Yang, Tae-Jin, Hur, Cheol-Goo, Kang, Byoung-Cheorl, Kim, Byung-Dong, Choi, Doil

“…Among the Solanaceae plants, the pepper genome is three times larger than that of tomato. Although the gene repertoire and gene order of both species are well…”
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Optimization of Protein Isolation and Label-Free Quantitative Proteomic Analysis in Four Different Tissues of Korean Ginseng by Van Nguyen, Truong, Kim, So-Wun, Min, Cheol-Woo, Gupta, Ravi, Lee, Gi-Hyun, Jang, Jeong-Woo, Rathi, Divya, Shin, Hye-Won, Jung, Ju-Young, Jo, Ick-Hyun, Hong, Woo-Jong, Jung, Ki-Hong, Kim, Seungill, Kim, Yu-Jin, Kim, Sun-Tae

“…Korean ginseng is one of the most valuable medicinal plants worldwide. However, our understanding of ginseng proteomics is largely limited due to difficulties…”
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Correction: De Novo Transcriptome Analysis to Identify Anthocyanin Biosynthesis Genes Responsible for Tissue-Specific Pigmentation in Zoysiagrass (Zoysia japonica Steud.) by Ahn, Jong Hwa, Kim, June-Sik, Kim, Seungill, Soh, Hye Yeon, Shin, Hosub, Jang, Hosung, Ryu, Ju Hyun, Kim, Ahyeong, Yun, Kil-Young, Kim, Shinje, Kim, Ki Sun, Choi, Doil, Huh, Jin Hoe

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