Search Results - "Khan, Lillian"

Miniaturization and optimization of 384-well compatible RNA sequencing library preparation by Mayday, Madeline Y, Khan, Lillian M, Chow, Eric D, Zinter, Matt S, DeRisi, Joseph L

“…Preparation of high-quality sequencing libraries is a costly and time-consuming component of metagenomic next generation sequencing (mNGS). While the overall…”
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A novel cause of chronic viral meningoencephalitis: Cache Valley virus by Wilson, Michael R., Suan, Dan, Duggins, Andrew, Schubert, Ryan D., Khan, Lillian M., Sample, Hannah A., Zorn, Kelsey C., Rodrigues Hoffman, Aline, Blick, Anna, Shingde, Meena, DeRisi, Joseph L.

“…Objective Immunodeficient patients are particularly vulnerable to neuroinvasive infections that can be challenging to diagnose. Metagenomic next generation…”
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Kelch-like Protein 11 Antibodies in Seminoma-Associated Paraneoplastic Encephalitis by Mandel-Brehm, Caleigh, Dubey, Divyanshu, Kryzer, Thomas J, O’Donovan, Brian D, Tran, Baouyen, Vazquez, Sara E, Sample, Hannah A, Zorn, Kelsey C, Khan, Lillian M, Bledsoe, Ian O, McKeon, Andrew, Pleasure, Samuel J, Lennon, Vanda A, DeRisi, Joseph L, Wilson, Michael R, Pittock, Sean J

“…Brain-stem and cerebellar encephalitis without the conventional anti-Ma2 autoantibody developed in a man with a history of seminoma. Phage display was used to…”
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Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing by Wilson, Michael R, O'Donovan, Brian D, Gelfand, Jeffrey M, Sample, Hannah A, Chow, Felicia C, Betjemann, John P, Shah, Maulik P, Richie, Megan B, Gorman, Mark P, Hajj-Ali, Rula A, Calabrese, Leonard H, Zorn, Kelsey C, Chow, Eric D, Greenlee, John E, Blum, Jonathan H, Green, Gary, Khan, Lillian M, Banerji, Debarko, Langelier, Charles, Bryson-Cahn, Chloe, Harrington, Whitney, Lingappa, Jairam R, Shanbhag, Niraj M, Green, Ari J, Brew, Bruce J, Soldatos, Ariane, Strnad, Luke, Doernberg, Sarah B, Jay, Cheryl A, Douglas, Vanja, Josephson, S Andrew, DeRisi, Joseph L

“…Identifying infectious causes of subacute or chronic meningitis can be challenging. Enhanced, unbiased diagnostic approaches are needed. To present a case…”
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Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens by Doan, Thuy, Wilson, Michael R, Crawford, Emily D, Chow, Eric D, Khan, Lillian M, Knopp, Kristeene A, O'Donovan, Brian D, Xia, Dongxiang, Hacker, Jill K, Stewart, Jay M, Gonzales, John A, Acharya, Nisha R, DeRisi, Joseph L

“…Ocular infections remain a major cause of blindness and morbidity worldwide. While prognosis is dependent on the timing and accuracy of diagnosis, the etiology…”
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Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens by Saha, Senjuti, Ramesh, Akshaya, Kalantar, Katrina, Malaker, Roly, Hasanuzzaman, Md, Khan, Lillian M, Mayday, Madeline Y, Sajib, M S I, Li, Lucy M, Langelier, Charles, Rahman, Hafizur, Crawford, Emily D, Tato, Cristina M, Islam, Maksuda, Juan, Yun-Fang, de Bourcy, Charles, Dimitrov, Boris, Wang, James, Tang, Jennifer, Sheu, Jonathan, Egger, Rebecca, De Carvalho, Tiago Rodrigues, Wilson, Michael R, Saha, Samir K, DeRisi, Joseph L

“…The burden of meningitis in low-and-middle-income countries remains significant, but the infectious causes remain largely unknown, impeding institution of…”
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ZSCAN1 Autoantibodies Are Associated with Pediatric Paraneoplastic ROHHAD by Mandel‐Brehm, Caleigh, Benson, Leslie A., Tran, Baouyen, Kung, Andrew F., Mann, Sabrina A., Vazquez, Sara E., Retallack, Hanna, Sample, Hannah A., Zorn, Kelsey C., Khan, Lillian M., Kerr, Lauren M., McAlpine, Patrick L., Zhang, Lichao, McCarthy, Frank, Elias, Joshua E., Katwa, Umakanth, Astley, Christina M., Tomko, Stuart, Dalmau, Josep, Seeley, William W., Pleasure, Samuel J., Wilson, Michael R., Gorman, Mark P., DeRisi, Joseph L.

“…Objective Rapid‐onset Obesity with Hypothalamic Dysfunction, Hypoventilation and Autonomic Dysregulation (ROHHAD), is a severe pediatric disorder of uncertain…”
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Clinicopathology conference: 41‐year‐old woman with chronic relapsing meningitis by Beck, Erin S., Ramachandran, Prashanth S., Khan, Lillian M., Sample, Hannah A., Zorn, Kelsey C., O'Connell, Elise M., Nash, Theodore, Reich, Daniel S., Venkatesan, Arun, DeRisi, Joseph L., Nath, Avindra, Wilson, Michael R.

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Central Nervous System Virus Infection in African Children with Cerebral Malaria by Postels, Douglas G, Osei-Tutu, Lawrence, Seydel, Karl B, Xu, Qian, Li, Chenxi, Taylor, Terrie E, John, Chandy C, Mallewa, Macpherson, Solomon, Tom, Agbenyega, Tsiri, Ansong, Daniel, Opoka, Robert O, Khan, Lillian M, Ramachandran, Prashanth S, Leon, Kristoffer E, DeRisi, Joseph L, Langelier, Charles, Wilson, Michael R

“…We aimed to identify the contribution of central nervous system (CNS) viral coinfection to illness in African children with retinopathy-negative or…”
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Author Correction: Pan-viral serology implicates enteroviruses in acute flaccid myelitis by Schubert, Ryan D., Hawes, Isobel A., Ramachandran, Prashanth S., Ramesh, Akshaya, Crawford, Emily D., Pak, John E., Wu, Wesley, Cheung, Carly K., O’Donovan, Brian D., Tato, Cristina M., Lyden, Amy, Tan, Michelle, Sit, Rene, Sowa, Gavin M., Sample, Hannah A., Zorn, Kelsey C., Banerji, Debarko, Khan, Lillian M., Bove, Riley, Hauser, Stephen L., Gelfand, Amy A., Johnson-Kerner, Bethany L., Nash, Kendall, Krishnamoorthy, Kalpathy S., Chitnis, Tanuja, Ding, Joy Z., McMillan, Hugh J., Chiu, Charles Y., Briggs, Benjamin, Glaser, Carol A., Yen, Cynthia, Chu, Victoria, Wadford, Debra A., Dominguez, Samuel R., Ng, Terry Fei Fan, Marine, Rachel L., Lopez, Adriana S., Nix, W. Allan, Soldatos, Ariane, Gorman, Mark P., Benson, Leslie, Messacar, Kevin, Konopka-Anstadt, Jennifer L., Oberste, M. Steven, DeRisi, Joseph L., Wilson, Michael R.

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Genomic and serologic characterization of enterovirus A71 brainstem encephalitis by Leon, Kristoffer E., Schubert, Ryan D., Casas-Alba, Didac, Hawes, Isobel A., Ramachandran, Prashanth S., Ramesh, Akshaya, Pak, John E., Wu, Wesley, Cheung, Carly K., Crawford, Emily D., Khan, Lillian M., Launes, Cristian, Sample, Hannah A., Zorn, Kelsey C., Cabrerizo, Maria, Valero-Rello, Ana, Langelier, Charles, Muñoz-Almagro, Carmen, DeRisi, Joseph L., Wilson, Michael R.

“…In 2016, Catalonia experienced a pediatric brainstem encephalitis outbreak caused by enterovirus A71 (EV-A71). Conventional testing identified EV in the…”
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Erratum to: Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens by Doan, Thuy, Wilson, Michael R, Crawford, Emily D, Chow, Eric D, Khan, Lillian M, Knopp, Kristeene A, O'Donovan, Brian D, Xia, Dongxiang, Hacker, Jill K, Stewart, Jay M, Gonzales, John A, Acharya, Nisha R, DeRisi, Joseph L

“…It has come to our attention that there is an error in Fig. 3a for this article [1]. The correct version of Fig. 3a can be found below. The red markers now…”
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Real world comparison of PENFAST and UK Penicillin allergy clinical decision rules in an Adult Allergy service in the UK by Khan, Lillian, Shah, Raeesa, Pur, Leyla, Romero, Patricia, Patil, Veeresh, Jayawardena, Chanaka

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Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults by Langelier, Charles, Kalantar, Katrina L., Moazed, Farzad, Wilson, Michael R., Crawford, Emily D., Deiss, Thomas, Belzer, Annika, Bolourchi, Samaneh, Caldera, Saharai, Fung, Monica, Jauregui, Alejandra, Malcolm, Katherine, Lyden, Amy, Khan, Lillian, Vessel, Kathryn, Quan, Jenai, Zinter, Matt, Chiu, Charles Y., Chow, Eric D., Wilson, Jenny, Miller, Steve, Matthay, Michael A., Pollard, Katherine S., Christenson, Stephanie, Calfee, Carolyn S., DeRisi, Joseph L.

“…Lower respiratory tract infections (LRTIs) lead to more deaths each year than any other infectious disease category. Despite this, etiologic LRTI pathogens are…”
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Pan-viral serology implicates enteroviruses in acute flaccid myelitis by Schubert, Ryan D., Hawes, Isobel A., Ramachandran, Prashanth S., Ramesh, Akshaya, Crawford, Emily D., Pak, John E., Wu, Wesley, Cheung, Carly K., O’Donovan, Brian D., Tato, Cristina M., Lyden, Amy, Tan, Michelle, Sit, Rene, Sowa, Gavin M., Sample, Hannah A., Zorn, Kelsey C., Banerji, Debarko, Khan, Lillian M., Bove, Riley, Hauser, Stephen L., Gelfand, Amy A., Johnson-Kerner, Bethany L., Nash, Kendall, Krishnamoorthy, Kalpathy S., Chitnis, Tanuja, Ding, Joy Z., McMillan, Hugh J., Chiu, Charles Y., Briggs, Benjamin, Glaser, Carol A., Yen, Cynthia, Chu, Victoria, Wadford, Debra A., Dominguez, Samuel R., Ng, Terry Fei Fan, Marine, Rachel L., Lopez, Adriana S., Nix, W. Allan, Soldatos, Ariane, Gorman, Mark P., Benson, Leslie, Messacar, Kevin, Konopka-Anstadt, Jennifer L., Oberste, M. Steven, DeRisi, Joseph L., Wilson, Michael R.

“…Since 2012, the United States of America has experienced a biennial spike in pediatric acute flaccid myelitis (AFM) 1 – 6 . Epidemiologic evidence suggests…”
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Pediatric Brainstem Encephalitis Outbreak Investigation with Metagenomic Next-Generation Sequencing (CCI.002) by Leon, Kristoffer E., Ramesh, Akshaya, Khan, Lillian, Launes, Cristian, Casas-Alba, Didac, Valero-Rello, Ana, Muñoz-Almagro, Carmen, DeRisi, Joseph L., Wilson, Michael R.

“…Abstract only…”
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Illuminating Tuberculosis Meningitis with Metagenomics and FLASH Enrichment (S45.005) by Ramachandran, Prashanth, Cresswell, Fiona, Langelier, Charles, Caldera, Saharai, Lyden, Amy, McGeever, Aaron, Batson, Josh, Sit, Rene, Neff, Norma, Travisano, Katherine, Khan, Lillian, DeRisi, Joe, Boulware, David, Crawford, Emily, Wilson, Michael

“…Abstract only…”
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A novel cause of chronic viral meningoencephalitis: C ache Valley virus by Wilson, Michael R., Suan, Dan, Duggins, Andrew, Schubert, Ryan D., Khan, Lillian M., Sample, Hannah A., Zorn, Kelsey C., Rodrigues Hoffman, Aline, Blick, Anna, Shingde, Meena, DeRisi, Joseph L.

“…Objective Immunodeficient patients are particularly vulnerable to neuroinvasive infections that can be challenging to diagnose. Metagenomic next generation…”
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