Search Results - "Ketting, Rene F."
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1
The Many Faces of RNAi
Published in Developmental cell (15-02-2011)“…Small non-coding RNAs, through association with Argonaute protein family members, have a variety of functions during the development of an organism. Although…”
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2
Zili is required for germ cell differentiation and meiosis in zebrafish
Published in The EMBO journal (22-10-2008)“…Small RNAs exert an effect through diverse RNA interference pathways to transcriptionally or post‐transcriptionally silence their targets. The Piwi‐interacting…”
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3
MUT-7 exoribonuclease activity and localization are mediated by an ancient domain
Published in Nucleic acids research (27-08-2024)“…Abstract The MUT-7 family of 3′–5′ exoribonucleases is evolutionarily conserved across the animal kingdom and plays essential roles in small RNA production in…”
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Maternal piRNAs Are Essential for Germline Development following De Novo Establishment of Endo-siRNAs in Caenorhabditis elegans
Published in Developmental cell (24-08-2015)“…The Piwi-piRNA pathway represents a germline-specific transposon-defense system. C. elegans Piwi, prg-1, is a non-essential gene and triggers a secondary RNAi…”
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5
How stress can affect your sex appeal
Published in Developmental cell (07-02-2022)“…In this issue of Developmental Cell, Toker et al. show that in C. elegans, stress-induced sperm defects lead to epigenetically heritable increased sexual…”
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6
Profiling of RNA modifications by multiplexed stable isotope labelling
Published in Chemical communications (Cambridge, England) (04-04-2014)“…The combination of (15)N/(13)C stable isotope labelling (SIL) and LC-MS/MS revealed a total of 52 modifications in RNA from E. coli and yeast, including 10…”
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Maternal and zygotic gene regulatory effects of endogenous RNAi pathways
Published in PLoS genetics (13-02-2019)“…Endogenous small RNAs (sRNAs) and Argonaute proteins are ubiquitous regulators of gene expression in germline and somatic tissues. sRNA-Argonaute complexes are…”
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8
Trimming it short: PNLDC1 is required for piRNA maturation during mouse spermatogenesis
Published in EMBO reports (01-03-2018)“…Transposon silencing within the germ line requires the proper processing of piRNA intermediates. However, the enzyme that is required for piRNA 3′ end…”
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Concepts and functions of small RNA pathways in C. elegans
Published in Current topics in developmental biology (2021)“…A diversity of gene regulatory mechanisms drives the changes in gene expression required for animal development. Here, we discuss the developmental roles of a…”
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Tupaia small RNAs provide insights into function and evolution of RNAi-based transposon defense in mammals
Published in RNA (Cambridge) (01-05-2015)“…Argonaute proteins comprising Piwi-like and Argonaute-like proteins and their guiding small RNAs combat mobile DNA on the transcriptional and…”
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11
Extensive nuclear gyration and pervasive non-genic transcription during primordial germ cell development in zebrafish
Published in Development (Cambridge) (20-01-2021)“…Primordial germ cells (PGCs) are the precursors of germ cells, which migrate to the genital ridge during early development. Relatively little is known about…”
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Bardet-Biedl syndrome proteins modulate the release of bioactive extracellular vesicles
Published in Nature communications (27-09-2021)“…Primary cilia are microtubule based sensory organelles important for receiving and processing cellular signals. Recent studies have shown that cilia also…”
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13
Substrate requirements for let-7 function in the developing zebrafish embryo
Published in Nucleic acids research (08-07-2016)Get full text
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14
piRNAs from Pig Testis Provide Evidence for a Conserved Role of the Piwi Pathway in Post-Transcriptional Gene Regulation in Mammals
Published in PloS one (07-05-2015)“…Piwi-interacting (pi-) RNAs guide germline-expressed Piwi proteins in order to suppress the activity of transposable elements (TEs). But notably, the majority…”
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MUT-14 and SMUT-1 DEAD Box RNA Helicases Have Overlapping Roles in Germline RNAi and Endogenous siRNA Formation
Published in Current biology (14-04-2014)“…More than 2,000 C. elegans genes are targeted for RNA silencing by the mutator complex, a specialized small interfering RNA (siRNA) amplification module which…”
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PIWI-interacting RNAs: from generation to transgenerational epigenetics
Published in Nature reviews. Genetics (01-08-2013)“…Key Points PIWI-interacting RNAs (piRNAs) are made from dedicated precursor transcripts that are transcribed from specialized loci. piRNA biogenesis from their…”
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17
A Dead End for MicroRNAs
Published in Cell (28-12-2007)“…Dead end (Dnd1) is an RNA-binding protein that mediates germ-cell viability and suppresses the formation of germ-cell tumors. Kedde et al. (2007) now provide…”
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Semiconserved Regulation of Mesendoderm Differentiation by microRNAs
Published in Developmental cell (01-04-2009)“…MicroRNAs are known to play important roles in many different processes. However, their roles in shaping the early steps in embryogenesis have remained largely…”
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RNAi genes pave their own way
Published in Genes & development (15-03-2011)“…Heterochromatin formation in fission yeast and the role of RNAi in this process have been intensively studied. So far, however, nothing is known about the…”
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Is This Mine? Small RNAs Help to Decide
Published in Developmental cell (23-12-2013)“…Genomes are constantly challenged by invaders, so determining what belongs is crucial. Small RNAs silence alien DNA, but Conine et al. (2013), Seth et al…”
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