Search Results - "Kelley, Jenny"

Genetic variations at loci involved in the immune response are risk factors for hepatocellular carcinoma by Clifford, Robert J., Zhang, Jinghui, Meerzaman, Daoud M., Lyu, Myung‐Soo, Hu, Ying, Cultraro, Constance M., Finney, Richard P., Kelley, Jenny M., Efroni, Sol, Greenblum, Sharon I., Nguyen, Cu V., Rowe, William L., Sharma, Sweta, Wu, Gang, Yan, Chunhua, Zhang, Hongen, Chung, Young‐Hwa, Kim, Jeong A., Park, Neung Hwa, Song, Il Han, Buetow, Kenneth H.

“…Primary liver cancer is the third most common cause of cancer‐related death worldwide, with a rising incidence in Western countries. Little is known about the…”
Get full text

High-throughput development and characterization of a genomewide collection of gene-based single nucleotide polymorphism markers by chip-based matrix-assisted laser desorption/ionization time-of-flight mass spectrometry by Buetow, Kenneth H., Edmonson, Michael, MacDonald, Richard, Clifford, Robert, Yip, Ping, Kelley, Jenny, Little, Daniel P., Strausberg, Robert, Koester, Hubert, Cantor, Charles R., Braun, Andreas

“…We describe here a system for the rapid identification, assay development, and characterization of gene-based single nucleotide polymorphisms (SNPs). This…”
Get full text

High-Throughput Development and Characterization of a Genomewide Collection of Gene-Based Single Nucleotide Polymorphism Markers by Chip-Based Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry by Buetow, Kenneth H., Edmonson, Michael, MacDonald, Richard, Clifford, Robert, Yip, Ping, Kelley, Jenny, Little, Daniel P., Strausberg, Robert, Koester, Hubert, Cantor, Charles R., Braun, Andreas

“…We describe here a system for the rapid identification, assay development, and characterization of gene-based single nucleotide polymorphisms (SNPs). This…”
Get full text

Whole-Genome Random Sequencing and Assembly of Haemophilus Influenzae Rd by Fleischmann, Robert D., Adams, Mark D., White, Owen, Clayton, Rebecca A., Kirkness, Ewen F., Kerlavage, Anthony R., Bult, Carol J., Tomb, Jean-Francois, Dougherty, Brian A., Merrick, Joseph M., McKenney, Keith, Sutton, Granger, FitzHugh, Will, Fields, Chris, Gocyne, Jeannie D., Scott, John, Shirley, Robert, Liu, Li-Ing, Glodek, Anna, Kelley, Jenny M., Weidman, Janice F., Phillips, Cheryl A., Spriggs, Tracy, Hedblom, Eva, Cotton, Matthew D., Utterback, Teresa R., Hanna, Michael C., Nguyen, David T., Saudek, Deborah M., Brandon, Rhonda C., Fine, Leah D., Fritchman, Janice L., Fuhrmann, Joyce L., Geoghagen, N. S. M., Gnehm, Cheryl L., McDonald, Lisa A., Small, Keith V., Fraser, Claire M., Smith, Hamilton O., Venter, J. Craig

“…An approach for genome analysis based on sequencing and assembly of unselected pieces of DNA from the whole chromosome has been applied to obtain the complete…”
Get full text

The Minimal Gene Complement of Mycoplasma genitalium by Fraser, Claire M., Gocayne, Jeannine D., White, Owen, Adams, Mark D., Clayton, Rebecca A., Fleischmann, Robert D., Bult, Carol J., Kerlavage, Anthony R., Sutton, Granger, Kelley, Jenny M., Fritchman, Janice L., Weidman, Janice F., Small, Keith V., Sandusky, Mina, Furhmann, Joyce, Nguyen, David, Utterback, Teresa R., Saudek, Deborah M., Phillips, Cheryl A., Merrick, Joseph M., Tomb, Jean-Francois, Dougherty, Brian A., Bott, Kenneth F., Hu, Ping-Chuan, Lucier, Thomas S., Peterson, Scott N., Smith, Hamilton O., Hutchison, Clyde A., Venter, J. Craig

“…The complete nucleotide sequence (580,070 base pairs) of the Mycoplasma genitalium genome, the smallest known genome of any free-living organism, has been…”
Get full text

Life sciences domain analysis model by Freimuth, Robert R, Freund, Elaine T, Schick, Lisa, Sharma, Mukesh K, Stafford, Grace A, Suzek, Baris E, Hernandez, Joyce, Hipp, Jason, Kelley, Jenny M, Rokicki, Konrad, Pan, Sue, Buckler, Andrew, Stokes, Todd H, Fernandez, Anna, Fore, Ian, Buetow, Kenneth H, Klemm, Juli D

“…Meaningful exchange of information is a fundamental challenge in collaborative biomedical research. To help address this, the authors developed the Life…”
Get full text

Genome-wide transcriptional sequencing identifies novel mutations in metabolic genes in human hepatocellular carcinoma by Meerzaman, Daoud M, Yan, Chunhua, Chen, Qing-Rong, Edmonson, Michael N, Schaefer, Carl F, Clifford, Robert J, Dunn, Barbara K, Dong, Li, Finney, Richard P, Cultraro, Constance M, Hu, Ying, Yang, Zhihui, Nguyen, Cu V, Kelley, Jenny M, Cai, Shuang, Zhang, Hongen, Zhang, Jinghui, Wilson, Rebecca, Messmer, Lauren, Chung, Young-Hwa, Kim, Jeong A, Park, Neung Hwa, Lyu, Myung-Soo, Song, Il Han, Komatsoulis, George, Buetow, Kenneth H

“…We report on next-generation transcriptome sequencing results of three human hepatocellular carcinoma tumor/tumor-adjacent pairs. This analysis robustly…”
Get full text

Complementary DNA Sequencing: Expressed Sequence Tags and Human Genome Project by Adams, Mark D., Kelley, Jenny M., Gocayne, Jeannine D., Dubnick, Mark, Polymeropoulos, Mihael H., Xiao, Hong, Merril, Carl R., Wu, Andrew, Olde, Bjorn, Moreno, Ruben F., Kerlavage, Anthony R., McCombie, W. Richard, Venter, J. Craig

“…Automated partial DNA sequencing was conducted on more than 600 randomly selected human brain complementary DNA (cDNA) clones to generate expressed sequence…”
Get full text

A high-resolution multistrain haplotype analysis of laboratory mouse genome reveals three distinctive genetic variation patterns by Zhang, Jinghui, Hunter, Kent W, Gandolph, Michael, Rowe, William L, Finney, Richard P, Kelley, Jenny M, Edmonson, Michael, Buetow, Kenneth H

“…Understanding of the structure and the origin of genetic variation patterns in the laboratory inbred mouse provides insight into the utility of the mouse model…”
Get full text

A genome scan of 18 families with chronic lymphocytic leukaemia by Goldin, Lynn R., Ishibe, Naoko, Sgambati, Maria, Marti, Gerald E., Fontaine, Laura, Lee, Maxwell P., Kelley, Jenny M., Scherpbier, Titia, Buetow, Kenneth H., Caporaso, Neil E.

“…Chronic lymphocytic leukaemia (CLL) accounts for about 30% of all leukaemias and is most prevalent in older individuals. Significant familial aggregation has…”
Get full text

Novel pathway analysis of genomic polymorphism-cancer risk interaction in the Breast Cancer Prevention Trial by Dunn, Barbara K, Greene, Mark H, Kelley, Jenny M, Costantino, Joseph P, Clifford, Robert J, Hu, Ying, Tang, Gong, Kazerouni, Neely, Rosenberg, Philip S, Meerzaman, Daoud M, Buetow, Kenneth H

“…Tamoxifen was approved for breast cancer risk reduction in high-risk women based on the National Surgical Adjuvant Breast and Bowel Project's Breast Cancer…”
Get full text

Analysis of genetic stability at the EP300 and CREBBP loci in a panel of cancer cell lines by Tillinghast, Guy W., Partee, Jason, Albert, Paul, Kelley, Jenny M., Burtow, Kenneth H., Kelly, Kathleen

“…EP300 (p300) and CREBBP (CBP) are highly related transcriptional co‐activators possessing histone acetyltransferase activity. These proteins have been…”
Get full text

Sequence identification of 2,375 human brain genes by Adams, Mark D, Dubnick, Mark, Kerlavage, Anthony R, Moreno, Ruben, Kelley, Jenny M, Utterback, Teresa R, Nagle, James W, Fields, Chris, Venter, J. Craig

Get full text

High throughput direct end sequencing of BAC clones by Kelley, Jenny M., Field, Casey E., Brook Craven, M., Rounsley, Steve D., Adams, Mark D., Bocskai, Diana, Kim, Ung-Jin

“…Libraries constructed in bacterial artificial chromosome (BAC) vectors have become the choice for clone sets in high throughput genomic sequencing projects…”
Get full text

The complete genome sequence of the gastric pathogen Helicobacter pylori by TOMB, J.-F, WHITE, O, NELSON, K, QUACKENBUSH, J, ZHOU, L, KIRKNESS, E. F, PETERSON, S, LOFTUS, B, RICHARDSON, D, DODSON, R, KHALAK, H. G, GLODEK, A, KERLAVAGE, A. R, MCKENNEY, K, FITZEGERALD, L. M, LEE, N, ADAMS, M. D, HICKEY, E. K, BERG, D. E, GOCAYNE, J. D, UTTERBACK, T. R, PETERSON, J. D, KELLEY, J. M, CLAYTON, R. A, COTTON, M. D, WELDMAN, J. M, FUJII, C, BOWMAN, C, WATTHEY, L, WALLIN, E, HAYES, W. S, BORODOVSKY, M, KARP, P. D, SMITH, H. O, SUTTON, G. G, FRASER, C. M, VENTER, J. C, FLEISCHMANN, R. D, KETCHUM, K. A, KLENK, H. P, GILL, S, DOUGHERTY, B. A

Get full text

Caenorhabditis elegans expressed sequence tags identify gene families and potential disease gene homologues by McCombie, W. Richard, Adams, Mark D, Kelley, Jenny M, FitzGerald, Michael G, Utterback, Teresa R, Khan, Mohammad, Dubnick, Mark, Kerlavage, Anthony R, Craig Venter, J, Fields, Chris

Get full text

A model for high-throughput automated DNA sequencing and analysis core facilities by Adams, Mark D, Kerlavage, Anthony R, Kelley, Jenny M, Gocayne, Jeannine D, Fields, Chris, Fraser, Claire M, Venter, J. Craig

“…Large-scale DNA sequencing and analysis is providing important molecular information on complex biological systems…”
Get full text

The complete genome sequence of the gastric pathogen Helicobacter pylori by Tomb, Jean-F, White, Owen, Kerlavage, Anthony R, Clayton, Rebecca A, Sutton, Granger G, Fleischmann, Robert D, Ketchum, Karen A, Klenk, Hans Peter, Gill, Steven, Dougherty, Brian A, Nelson, Karen, Quackenbush, John, Zhou, Lixin, Kirkness, Ewen F, Peterson, Scott, Loftus, Brendan, Richardson, Delwood, Dodson, Robert, Khalak, Hanif G, Glodek, Anna, McKenney, Keith, Fitzegerald, Lisa M, Lee, Norman, Adams, Mark D, Hickey, Erin K, Berg, Douglas E, Gocayne, Jeanine D, Utterback, Teresa R, Peterson, Jeremy D, Kelley, Jenny M, Cotton, Matthew D, Weidman, Janice M, Fujii, Claire, Bowman, Cheryl, Watthey, Larry, Wallin, Erik, Hayes, William S, Borodovsky, Mark, Karp, Peter D, Smith, Hamilton O, Fraser, Claire M, Venter, J. Craig

“…Helicobacter pylori, strain 26695, has a circular genome of 1,667,867 base pairs and 1,590 predicted coding sequences. Sequence analysis indicates that H…”
Get full text

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii by Bult, Carol J., White, Owen, Olsen, Gary J., Zhou, Lixin, Fleischmann, Robert D., Sutton, Granger G., Blake, Judith A., FitzGerald, Lisa M., Clayton, Rebecca A., Gocayne, Jeannine D., Kerlavage, Anthony R., Dougherty, Brian A., Tomb, Jean-Francois, Adams, Mark D., Reich, Claudia I., Overbeek, Ross, Kirkness, Ewen F., Weinstock, Keith G., Merrick, Joseph M., Glodek, Anna, Scott, John L., Neil S. M. Geoghagen, Weidman, Janice F., Fuhrmann, Joyce L., Nguyen, Dave, Utterback, Teresa R., Kelley, Jenny M., Peterson, Jeremy D., Sadow, Paul W., Hanna, Michael C., Cotton, Matthew D., Roberts, Kevin M., Hurst, Margaret A., Kaine, Brian P., Borodovsky, Mark, Klenk, Hans-Peter, Fraser, Claire M., Smith, Hamilton O., Woese, Carl R., Venter, J. Craig

“…The complete 1.66-megabase pair genome sequence of an autotrophic archaeon, Methanococcus jannaschii, and its 58- and 16-kilobase pair extrachromosomal…”
Get full text

Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence by Adams, M D, Kerlavage, A R, Fleischmann, R D, Fuldner, R A, Bult, C J, Lee, N H, Kirkness, E F, Weinstock, K G, Gocayne, J D, White, O

“…In an effort to identify new genes and analyse their expression patterns, 174,472 partial complementary DNA sequences (expressed sequence tags (ESTs)),…”
Get full text