Search Results - "Karrer, Kathleen M."

A Developmentally Regulated Gene, ASI2, Is Required for Endocycling in the Macronuclear Anlagen of Tetrahymena by Yin, Lihui, Gater, Susan T, Karrer, Kathleen M

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Nuclear Dualism by Karrer, Kathleen M.

“…Nuclear dualism is a characteristic feature of the ciliated protozoa. Tetrahymena have two different nuclei in each cell. The larger, polyploid, somatic…”
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Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote by Eisen, Jonathan A, Coyne, Robert S, Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R, Badger, Jonathan H, Ren, Qinghu, Amedeo, Paolo, Jones, Kristie M, Tallon, Luke J, Delcher, Arthur L, Salzberg, Steven L, Silva, Joana C, Haas, Brian J, Majoros, William H, Farzad, Maryam, Carlton, Jane M, Smith, Jr, Roger K, Garg, Jyoti, Pearlman, Ronald E, Karrer, Kathleen M, Sun, Lei, Manning, Gerard, Elde, Nels C, Turkewitz, Aaron P, Asai, David J, Wilkes, David E, Wang, Yufeng, Cai, Hong, Collins, Kathleen, Stewart, B Andrew, Lee, Suzanne R, Wilamowska, Katarzyna, Weinberg, Zasha, Ruzzo, Walter L, Wloga, Dorota, Gaertig, Jacek, Frankel, Joseph, Tsao, Che-Chia, Gorovsky, Martin A, Keeling, Patrick J, Waller, Ross F, Patron, Nicola J, Cherry, J Michael, Stover, Nicholas A, Krieger, Cynthia J, del Toro, Christina, Ryder, Hilary F, Williamson, Sondra C, Barbeau, Rebecca A, Hamilton, Eileen P, Orias, Eduardo

“…The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma…”
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Homing Endonucleases Encoded by Germ Line-Limited Genes in Tetrahymena thermophila Have APETELA2 DNA Binding Domains by Wuitschick, Jeffrey D, Lindstrom, Paul R, Meyer, Alison E, Karrer, Kathleen M

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Elimination of Foreign DNA during Somatic Differentiation in Tetrahymena thermophila Shows Position Effect and Is Dosage Dependent by Liu, Yifan, Song, Xiaoyuan, Gorovsky, Martin A, Karrer, Kathleen M

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Diverse Sequences within Tlr Elements Target Programmed DNA Elimination in Tetrahymena thermophila by Wuitschick, Jeffrey D, Karrer, Kathleen M

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Progeny of germ line knockouts of ASI2, a gene encoding a putative signal transduction receptor in Tetrahymena thermophila, fail to make the transition from sexual reproduction to vegetative growth by Li, Shuqiang, Yin, Lihui, Cole, Eric S., Udani, Rupa A., Karrer, Kathleen M.

“…The ciliated protozoan Tetrahymena has two nuclei: a germ line micronucleus and a somatic macronucleus. The transcriptionally active macronucleus has about 50…”
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Two Distinct Gene Subfamilies within the Family of Cysteine Protease Genes by Karrer, Kathleen M., Peiffer, Stacia L., DiTomas, Michele E.

“…A cDNA clone for a physiologically regulated Tetrahymena cysteine protease gene was sequenced. The nucleotide sequence predicts that the clone encodes a…”
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Methylation of adenine in the nuclear DNA of Tetrahymena is internucleosomal and independent of histone H1 by Karrer, Kathleen M, VanNuland, Teresa A

“…There are about 50 copies of each chromosome in the somatic macronucleus of the ciliated protozoan TETRAHYMENA: Approximately 0.8% of the adenine residues in…”
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A novel family of mobile genetic elements is limited to the germline genome in Tetrahymena thermophila by Wuitschick, Jeffrey D., Gershan, Jill A., Lochowicz, Andrew J., Li, Shuqiang, Karrer, Kathleen M.

“…In the ciliated protozoan Tetrahymena thermophila, extensive DNA elimination is associated with differentiation of the somatic macronucleus from the germline…”
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Analysis of Genomic G + C Content, Codon Usage, Initiator Codon Context and Translation Termination Sites In Tetrahymena Thermophila by WUITSCHICK, JEFFREY D., KARRER, KATHLEEN M.

“…In recent years, the amount of molecular sequencing data from Tetrahymena thermophila has dramatically increased. We analyzed G + C content, codon usage,…”
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A developmentally regulated deletion element with long terminal repeats has cis-acting sequences in the flanking DNA by Patil, N S, Karrer, K M

“…Approximately 6000 specific DNA deletion events occur during development of the somatic macro-nucleus of the ciliate Tetrahymena. The eliminated Tlr1 element…”
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A family of developmentally excised DNA elements in Tetrahymena is under selective pressure to maintain an open reading frame encoding an integrase-like protein by Gershan, J A, Karrer, K M

“…Tlr1 is a member of a family of approximately 20-30 DNA elements that undergo developmentally regulated excision during formation of the macronucleus in the…”
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Nucleosome Positioning Is Independent of Histone H1in Vivo by Karrer, Kathleen M., VanNuland, Teresa A.

“…Nucleosome positioning in the somatic macronuclear genome of the ciliated protozoan Tetrahymena thermophila was analyzed by indirect end labeling. Nucleosomes…”
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Chapter 3 - Nuclear Dualism by Karrer, Kathleen M

“…Nuclear dualism is a characteristic feature of the ciliated protozoa. Tetrahymena have two different nuclei in each cell. The larger, polyploid, somatic…”
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Tetrahymena genetics: two nuclei are better than one by Karrer, K M

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Genomic Reorganization in Ciliated Protozoans by Blackburn, Elizabeth H, Karrer, Kathleen M

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ASI1, a gene encoding a novel leucine zipper protein, is induced during development of the macronucleus in Tetrahymena by Udani, Rupa A, Karrer, Kathleen M

“…Sexual reproduction in the ciliate Tetrahymena follows a complex developmental program involving the sequential regulation of dozens of genes. Genes that are…”
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Genetically mapping a Tetrahymena cloned and sequenced gene: ASI1 by BARBEAU, REBECCA A., ORIAS, EDUARDO, KARRER, KATHLEEN M., HAMILTON, EILEEN

“…The Tetrahymena thermophila ASI1 gene encodes a leucine zipper protein that is upregulated during post‐zygotic development (Udani and Karrer 2002). AT‐rich…”
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Nucleosome positioning is independent of histone H1 in vivo by Karrer, K M, VanNuland, T A

“…Nucleosome positioning in the somatic macronuclear genome of the ciliated protozoan Tetrahymena thermophila was analyzed by indirect end labeling. Nucleosomes…”
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