Search Results - "Kapitonov, V"

Rolling-Circle Transposons in Eukaryotes by Kapitonov, V V, Jurka, J

“…All eukaryotic DNA transposons reported so far belong to a single category of elements transposed by the so-called "cut-and-paste" mechanism. Here, we report a…”
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RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons by Kapitonov, Vladimir V, Jurka, Jerzy

“…The V(D)J recombination reaction in jawed vertebrates is catalyzed by the RAG1 and RAG2 proteins, which are believed to have emerged approximately 500 million…”
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Self-Synthesizing DNA Transposons in Eukaryotes by Kapitonov, Vladimir V., Jurka, Jerzy

“…Eukaryotes contain numerous transposable or mobile elements capable of parasite-like proliferation in the host genome. All known transposable elements in…”
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Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon by Kapitonov, Vladimir V, Koonin, Eugene V

“…The RAG1 and RAG2 proteins are essential subunits of the V(D)J recombinase that is required for the generation of the enormous variability of antibodies and…”
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Nonlinear polaritons in a monolayer semiconductor coupled to optical bound states in the continuum by Kravtsov, Vasily, Khestanova, Ekaterina, Benimetskiy, Fedor A., Ivanova, Tatiana, Samusev, Anton K., Sinev, Ivan S., Pidgayko, Dmitry, Mozharov, Alexey M., Mukhin, Ivan S., Lozhkin, Maksim S., Kapitonov, Yuri V., Brichkin, Andrey S., Kulakovskii, Vladimir D., Shelykh, Ivan A., Tartakovskii, Alexander I., Walker, Paul M., Skolnick, Maurice S., Krizhanovskii, Dmitry N., Iorsh, Ivan V.

“…Optical bound states in the continuum (BICs) provide a way to engineer very narrow resonances in photonic crystals. The extended interaction time in these…”
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The amphioxus genome and the evolution of the chordate karyotype by Satoh, Nori, Rokhsar, Daniel S, Putnam, Nicholas H, Butts, Thomas, Ferrier, David E. K, Furlong, Rebecca F, Hellsten, Uffe, Kawashima, Takeshi, Robinson-Rechavi, Marc, Shoguchi, Eiichi, Terry, Astrid, Yu, Jr-Kai, Benito-Gutiérrez, E lia, Dubchak, Inna, Garcia-Fernàndez, Jordi, Gibson-Brown, Jeremy J, Grigoriev, Igor V, Horton, Amy C, de Jong, Pieter J, Jurka, Jerzy, Kapitonov, Vladimir V, Kohara, Yuji, Kuroki, Yoko, Lindquist, Erika, Lucas, Susan, Osoegawa, Kazutoyo, Pennacchio, Len A, Salamov, Asaf A, Satou, Yutaka, Sauka-Spengler, Tatjana, Schmutz, Jeremy, Shin-I, Tadasu, Toyoda, Atsushi, Bronner-Fraser, Marianne, Fujiyama, Asao, Holland, Linda Z, Holland, Peter W. H

“…Lancelets (‘amphioxus’) are the modern survivors of an ancient chordate lineage, with a fossil record dating back to the Cambrian period. Here we describe the…”
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Molecular Paleontology of Transposable Elements in the Drosophila melanogaster Genome by Kapitonov, Vladimir V., Jurka, Jerzy

“…We report here a superfamily of "cut and paste" DNA transposons called Transib. These transposons populate the Drosophila melanogaster and Anopheles gambiae…”
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A novel class of SINE elements derived from 5S rRNA by Kapitonov, Vladimir V, Jurka, Jerzy

“…Eukaryotic genomes are colonized by different retroposons, including short interspersed repetitive elements (SINEs). All currently known SINEs are derived from…”
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Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization by Putnam, Nicholas H, Srivastava, Mansi, Hellsten, Uffe, Dirks, Bill, Chapman, Jarrod, Salamov, Asaf, Terry, Astrid, Shapiro, Harris, Lindquist, Erika, Kapitonov, Vladimir V, Jurka, Jerzy, Genikhovich, Grigory, Grigoriev, Igor V, Lucas, Susan M, Steele, Robert E, Finnerty, John R, Technau, Ulrich, Martindale, Mark Q, Rokhsar, Daniel S

“…Sea anemones are seemingly primitive animals that, along with corals, jellyfish, and hydras, constitute the oldest eumetazoan phylum, the Cnidaria. Here, we…”
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Microstructural analysis and optical properties of the halide double perovskite Cs2BiAgBr6 single crystals by Lozhkina, O.A., Murashkina, A.A., Elizarov, M.S., Shilovskikh, V.V., Zolotarev, A.A., Kapitonov, Yu. V., Kevorkyants, R., Emeline, A.V., Miyasaka, T.

“…[Display omitted] •Cs2BiAgBr6 single crystals were grown by crystallization from solution.•Band structure of the Cs2BiAgBr6 was modeled in the framework of…”
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A universal classification of eukaryotic transposable elements implemented in Repbase by Kapitonov, Vladimir V, Jurka, Jerzy

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Repbase Update, a database of eukaryotic repetitive elements by Jurka, J, Kapitonov, V V, Pavlicek, A, Klonowski, P, Kohany, O, Walichiewicz, J

“…Repbase Update is a comprehensive database of repetitive elements from diverse eukaryotic organisms. Currently, it contains over 3600 annotated sequences…”
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Repetitive sequences in complex genomes: structure and evolution by Jurka, Jerzy, Kapitonov, Vladimir V, Kohany, Oleksiy, Jurka, Michael V

“…Eukaryotic genomes contain vast amounts of repetitive DNA derived from transposable elements (TEs). Large-scale sequencing of these genomes has produced an…”
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Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions by Merchant, Sabeeha S, Prochnik, Simon E, Vallon, Olivier, Harris, Elizabeth H, Karpowicz, Steven J, Witman, George B, Terry, Astrid, Fritz-Laylin, Lillian K, Maréchal-Drouard, Laurence, Marshall, Wallace F, Qu, Liang-Hu, Nelson, David R, Sanderfoot, Anton A, Spalding, Martin H, Kapitonov, Vladimir V, Ren, Qinghu, Ferris, Patrick, Shapiro, Harris, Lucas, Susan M, Grimwood, Jane, Cerutti, Heriberto, Chanfreau, Guillaume, Chen, Chun-Long, Cognat, Valérie, Croft, Martin T, Dent, Rachel, Dutcher, Susan, Fernández, Emilio, Fukuzawa, Hideya, González-Halphen, Diego, Hallmann, Armin, Hippler, Michael, Jabbari, Kamel, Kalanon, Ming, Kuras, Richard, Lefebvre, Paul A, Lemaire, Stéphane D, Lohr, Martin, Meier, Iris, Mets, Laurens, Mittag, Maria, Mittelmeier, Telsa, Moroney, James V, Moseley, Jeffrey, Nedelcu, Aurora M, Niyogi, Krishna, Novoselov, Sergey V, Paulsen, Ian T, Pazour, Greg, Purton, Saul, Ral, Jean-Philippe, Riaño-Pachón, Diego Mauricio, Riekhof, Wayne, Rymarquis, Linda, Schroda, Michael, Stern, David, Umen, James, Wilson, Nedra, Zimmer, Sara Lana, Allmer, Jens, Bisova, Katerina, Chen, Chong-Jian, Elias, Marek, Gendler, Karla, Lamb, Mary Rose, Long, Joanne C, Minagawa, Jun, Page, M. Dudley, Pan, Junmin, Roje, Sanja, Rose, Annkatrin, Stahlberg, Eric, Terauchi, Aimee M, Ball, Steven, Bowler, Chris, Dieckmann, Carol L, Gladyshev, Vadim N, Green, Pamela, Jorgensen, Richard, Mayfield, Stephen, Mueller-Roeber, Bernd, Rajamani, Sathish, Sayre, Richard T, Brokstein, Peter, Dubchak, Inna, Goodstein, David, Huang, Y. Wayne, Jhaveri, Jinal, Luo, Yigong, Martínez, Diego, Ngau, Wing Chi Abby, Otillar, Bobby, Poliakov, Alexander, Porter, Aaron, Szajkowski, Lukasz, Werner, Gregory, Zhou, Kemin, Grigoriev, Igor V, Rokhsar, Daniel S, Grossman, Arthur R

“…Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying…”
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Polarized Raman Study of Internal Vibrations of the Organic Cation in 3‑Cyanopyridinium Lead Tribromide Post-perovskite by Samsonova, Anna Yu, Krauklis, Irina V., Chizhov, Yuri V., Selivanov, Nikita I., Emeline, Alexei V., Kapitonov, Yury V.

“…In this work, we apply polarized Raman spectroscopy for study of internal vibrations of the 3-cyanopyridinium cation in the halide post-perovskite (3cp)­PbBr3…”
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Diffuse Reflectance Spectroscopy with Dilution: A Powerful Method for Halide Perovskites Study by Murzin, Aleksei O, Samsonova, Anna Yu, Stoumpos, Constantinos C, Selivanov, Nikita I, Emeline, Alexei V, Kapitonov, Yury V

“…Halide perovskites and their low-dimensional analogs are promising semiconductor materials for solar cells, LEDs, lasers, detectors and other applications in…”
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Polarimetry of photon echo on charged and neutral excitons in semiconductor quantum wells by Poltavtsev, S. V., Kapitonov, Yu. V., Yugova, I. A., Akimov, I. A., Yakovlev, D. R., Karczewski, G., Wiater, M., Wojtowicz, T., Bayer, M.

“…Coherent optical spectroscopy such as four-wave mixing and photon echo generation deliver rich information on the energy levels involved in optical transitions…”
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Simple and fast classification of non-LTR retrotransposons based on phylogeny of their RT domain protein sequences by Kapitonov, Vladimir V., Tempel, Sébastien, Jurka, Jerzy

“…Rapidly growing number of sequenced genomes requires fast and accurate computational tools for analysis of different transposable elements (TEs). In this paper…”
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Six-Vertex Model as a Grassmann Integral, One-Point Function, and the Arctic Ellipse by Kapitonov, V. S., Pronko, A. G.

“…We formulate the six-vertex model with domain wall boundary conditions in terms of an integral over Grassmann variables. Relying on this formulation, we…”
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Internal Vibrations of Pyridinium Cation in One-Dimensional Halide Perovskites and the Corresponding Halide Salts by Samsonova, Anna Yu, Mikheleva, Alena Yu, Bulanin, Kirill M, Selivanov, Nikita I, Mazur, Anton S, Tolstoy, Peter M, Stoumpos, Constantinos C, Kapitonov, Yury V

“…We investigate vibrations of the pyridinium cation PyH = C H NH in one-dimensional lead halide perovskites PyPbX and pyridinium halide salts PyHX (X = I , Br…”
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