Search Results - "Kang, Xiongbin"

phasebook: haplotype-aware de novo assembly of diploid genomes from long reads by Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander

“…Haplotype-aware diploid genome assembly is crucial in genomics, precision medicine, and many other disciplines. Long-read sequencing technologies have greatly…”
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Strainline: full-length de novo viral haplotype reconstruction from noisy long reads by Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander

“…Haplotype-resolved de novo assembly of highly diverse virus genomes is critical in prevention, control and treatment of viral diseases. Current methods either…”
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VeChat: correcting errors in long reads using variation graphs by Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander

“…Error correction is the canonical first step in long-read sequencing data analysis. Current self-correction methods, however, are affected by consensus…”
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HyLight: Strain aware assembly of low coverage metagenomes by Kang, Xiongbin, Zhang, Wenhai, Li, Yichen, Luo, Xiao, Schönhuth, Alexander

“…Different strains of identical species can vary substantially in terms of their spectrum of biomedically relevant phenotypes. Reconstructing the genomes of…”
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Hybrid-hybrid correction of errors in long reads with HERO by Kang, Xiongbin, Xu, Jialu, Luo, Xiao, Schönhuth, Alexander

“…Although generally superior, hybrid approaches for correcting errors in third-generation sequencing (TGS) reads, using next-generation sequencing (NGS) reads,…”
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Enhancing Long-Read-Based Strain-Aware Metagenome Assembly by Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander

“…Microbial communities are usually highly diverse and often involve multiple strains from the participating species due to the rapid evolution of…”
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Reprocessing 16S rRNA Gene Amplicon Sequencing Studies: (Meta)Data Issues, Robustness, and Reproducibility by Kang, Xiongbin, Deng, Dong Mei, Crielaard, Wim, Brandt, Bernd W.

“…High-throughput sequencing technology provides an efficient method for evaluating microbial ecology. Different bioinformatics pipelines can be used to convert…”
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An Advanced Model to Precisely Estimate the Cell-Free Fetal DNA Concentration in Maternal Plasma by Kang, Xiongbin, Xia, Jun, Wang, Yicong, Xu, Huixin, Jiang, Haojun, Xie, Weiwei, Chen, Fang, Zeng, Peng, Li, Xuchao, Xie, Yifan, Liu, Hongtai, Huang, Guodong, Chen, Dayang, Liu, Ping, Jiang, Hui, Zhang, Xiuqing

“…With the speedy development of sequencing technologies, noninvasive prenatal testing (NIPT) has been widely applied in clinical practice for testing for fetal…”
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StrainXpress: strain aware metagenome assembly from short reads by Kang, Xiongbin, Luo, Xiao, Schönhuth, Alexander

“…Abstract Next-generation sequencing–based metagenomics has enabled to identify microorganisms in characteristic habitats without the need for lengthy…”
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Predicting the prevalence of complex genetic diseases from individual genotype profiles using capsule networks by Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander

“…Diseases that have a complex genetic architecture tend to suffer from considerable amounts of genetic variants that, although playing a role in the disease,…”
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Complete mitochondrial genome of the American flamingo, Phoenicopterus ruber (Phoenicopteriformes, Phoenicopteridae) by Luo, Xiao, Kang, Xiongbin, Zhang, Dongya

“…The American flamingo, Phoenicopterus ruber (P. ruber), is a large species of flamingo closely related to the greater flamingo and Chilean flamingo. In this…”
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Isolation and whole genome sequencing of fetal cells from maternal blood towards the ultimate non‐invasive prenatal testing by Chen, Fang, Liu, Ping, Gu, Ying, Zhu, Zhu, Nanisetti, Amulya, Lan, Zhangzhang, Huang, Zhiwei, Liu, Jia Sophie, Kang, Xiongbin, Deng, Yuqing, Luo, Liqiong, Jiang, Dan, Qiu, Yong, Pan, Jianchang, Xia, Jun, Xiong, Ken, Liu, Chao, Xie, Lin, Shi, Qianyu, Li, Jing, Zhang, Xiuqing, Wang, Wei, Drmanac, Snezana, Bolund, Lars, Jiang, Hui, Drmanac, Radoje, Xu, Xun

“…Objective The purpose of this study were to develop a methodology of isolating fetal cells from maternal blood and use deep sequence demonstrating the promise…”
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Complete mitochondrial genome of Drosophila albomicans by Kang, Xiongbin, Luo, Xiao, Zhang, Zhi, Zhang, Zhen, Yang, Junqing, Bi, Guiqi

“…Drosophila albomicans has been widely used as an important animal model for chromosome evolution. In this study, the mitochondrial genome sequence of this…”
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