Search Results - "KUNISAWA, Takashi"

Evolutionary relationships of completely sequenced Clostridia species and close relatives by Kunisawa, Takashi

“…The class Clostridia in the phylum Firmicutes includes a very heterogeneous assemblage of bacteria. Their evolutionary relationships are not well established;…”
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Bacteriophage T4 Genome by MILLER, Eric S, KUTTER, Elizabeth, MOSIG, Gisela, ARISAKA, Fumio, KUNISAWA, Takashi, RÜGER, Wolfgang

“…Article Usage Stats Services MMBR Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Functional Role of Mycobacteriophage Transfer RNAs by KUNISAWA, TAKASHI

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The phylogenetic placement of the non-phototrophic, Gram-positive thermophile 'Thermobaculum terrenum' and branching orders within the phylum 'Chloroflexi' inferred from gene order comparisons by KUNISAWA, Takashi

“…The phylogenetic position of an anaerobic, non-spore-forming thermophile 'Thermobaculum terrenum' was investigated on the basis of gene order data from…”
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Evaluation of the phylogenetic position of the sulfate-reducing bacterium Thermodesulfovibrio yellowstonii (phylum Nitrospirae) by means of gene order data from completely sequenced genomes by KUNISAWA, Takashi

“…The phylogenetic placement of Thermodesulfovibrio yellowstonii was investigated on the basis of gene order data from completely sequenced bacterial genomes. T…”
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Inference of the phylogenetic position of the phylum Deferribacteres from gene order comparison by Kunisawa, Takashi

“…The phylogenetic placement of the phylum Deferribacteres was investigated on the basis of gene order comparisons of completely sequenced bacterial genomes. Two…”
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Synonymous codon preferences in bacteriophage T4: a distinctive use of transfer RNAs from T4 and from its host Escherichia coli by Kunisawa, T

“…Codon usage data of bacteriophage T4 genes were compiled and synonymous codon preferences were investigated in comparison with tRNA availabilities in an…”
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Gene arrangements characteristic of the phylum Actinobacteria by Kunisawa, Takashi

“…The availability of genomic sequence data allows new challenges to various biological problems. One of such attempts is the extraction of phylogenetic…”
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Dichotomy of major bacterial phyla inferred from gene arrangement comparisons by Kunisawa, Takashi

“…A computer search for gene arrangements that are present in Gram-positive bacteria but are absent from Proteobacteria and vice versa was carried out. Four such…”
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Gene arrangements and branching orders of gram-positive bacteria by Kunisawa, Takashi

“…The availability of complete genomic sequence data allows one to develop new methods of reconstructing phylogenetic trees. A simple method of reconstructing…”
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Branching orders among α-proteobacteria and mitochondria inferred from gene transpositions by Kunisawa, Takashi

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Gene order breakpoint evidence in animal mitochondrial phylogeny by Blanchette, M, Kunisawa, T, Sankoff, D

“…Multiple genome rearrangement methodology facilitates the inference of animal phylogeny from gene orders on the mitochondrial genome. The breakpoint distance…”
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Gene Arrangements and Phylogeny in the Class Proteobacteria by KUNISAWA, TAKASHI

“…A simple method is presented for reconstructing phylogenetic trees on the basis of gene transposition. It is shown that differences in gene arrangements among…”
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Sense-Antisense Strand Similarity and its Interpretation in Evolutionary Processes by KUNISAWA, Takashi

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Identification of DNA sequence motifs in Escherichia coli genome by Kunisawa, Takashi, Nakamura, Masahiko

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Parametric genome rearrangement by Blanchette, Mathieu, Kunisawa, Takashi, Sankoff, David

“…Algorithms inspired by comparative genomics calculate an edit distance between two linear orders based on elementary edit operations such as inversion,…”
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Critical Slowing-Down near the Transition Region from the Resting to Time-Ordered States in Squid Giant Axons by Matsumoto, Gen, Kunisawa, Takashi

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Identification and chromosomal distribution of DNA sequence segments conserved since divergence of Escherichia coli and Bacillus subtilis by Kunisawa, T

“…DNA sequence segments conserved since divergence of Escherichia coli and Bacillus subtilis were identified, using the GenBank sequence database. Chromosomal…”
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Comparison of synonymous codon distribution patterns of bacteriophage and host genomes by Kunisawa, T, Kanaya, S, Kutter, E

“…Synonymous codon usage patterns of bacteriophage and host genomes were compared. Two indexes, G + C base composition of a gene (fgc) and fraction of…”
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Alteration in synonymous arginine codon preferences of bacillus subtilis during sporulation by Kunisawa, Takashi

“…How do cells of one type differentiate into dissimilar types of cells? Great progress has been made in elucidating the complex genetic program regulating spore…”
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