Search Results - "KALINOWSKI, Jörn"

High quality genome sequences of thirteen Hypoxylaceae (Ascomycota) strengthen the phylogenetic family backbone and enable the discovery of new taxa by Wibberg, Daniel, Stadler, Marc, Lambert, Christopher, Bunk, Boyke, Spröer, Cathrin, Rückert, Christian, Kalinowski, Jörn, Cox, Russell J., Kuhnert, Eric

“…The Hypoxylaceae (Xylariales, Ascomycota) is a diverse family of mainly saprotrophic fungi, which commonly occur in angiosperm-dominated forests around the…”
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Exploring the molecular content of CHO exosomes during bioprocessing by Keysberg, Christoph, Hertel, Oliver, Schelletter, Louise, Busche, Tobias, Sochart, Chiara, Kalinowski, Jörn, Hoffrogge, Raimund, Otte, Kerstin, Noll, Thomas

“…In biopharmaceutical production, Chinese hamster ovary (CHO) cells derived from Cricetulus griseus remain the most commonly used host cell for recombinant…”
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Three previously unrecognised classes of biosynthetic enzymes revealed during the production of xenovulene A by Schor, Raissa, Schotte, Carsten, Wibberg, Daniel, Kalinowski, Jörn, Cox, Russell J.

“…Xenovulene A is a complex fungal meroterpenoid, produced by the organism hitherto known as Acremonium strictum IMI 501407, for which limited biosynthetic…”
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A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world by Berckx, Fede, Nguyen, Thanh Van, Bandong, Cyndi Mae, Lin, Hsiao-Han, Yamanaka, Takashi, Katayama, Sae, Wibberg, Daniel, Blom, Jochen, Kalinowski, Jörn, Tateno, Masaki, Simbahan, Jessica, Liu, Chi-Te, Brachmann, Andreas, Pawlowski, Katharina

“…It is currently assumed that around 100 million years ago, the common ancestor to the Fabales, Fagales, Rosales and Cucurbitales in Gondwana, developed a root…”
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Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species by Adamek, Martina, Alanjary, Mohammad, Sales-Ortells, Helena, Goodfellow, Michael, Bull, Alan T, Winkler, Anika, Wibberg, Daniel, Kalinowski, Jörn, Ziemert, Nadine

“…Genome mining tools have enabled us to predict biosynthetic gene clusters that might encode compounds with valuable functions for industrial and medical…”
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Intragenomic polymorphisms in the ITS region of high-quality genomes of the Hypoxylaceae (Xylariales, Ascomycota) by Stadler, Marc, Lambert, Christopher, Wibberg, Daniel, Kalinowski, Jörn, Cox, Russell J., Kolařík, Miroslav, Kuhnert, Eric

“…The internal transcribed spacer (ITS) region of the ribosomal DNA (rDNA) has been established (and is generally accepted) as a primary “universal” genetic…”
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Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum by Busche, Tobias, Silar, Radoslav, Pičmanová, Martina, Pátek, Miroslav, Kalinowski, Jörn

“…The expression of genes in Corynebacterium glutamicum, a Gram-positive non-pathogenic bacterium used mainly for the industrial production of amino acids, is…”
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Eliciting the silent lucensomycin biosynthetic pathway in Streptomyces cyanogenus S136 via manipulation of the global regulatory gene adpA by Yushchuk, Oleksandr, Ostash, Iryna, Mösker, Eva, Vlasiuk, Iryna, Deneka, Maksym, Rückert, Christian, Busche, Tobias, Fedorenko, Victor, Kalinowski, Jörn, Süssmuth, Roderich D., Ostash, Bohdan

“…Actinobacteria are among the most prolific sources of medically and agriculturally important compounds, derived from their biosynthetic gene clusters (BGCs)…”
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A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs by Gräwe, Alexander, Dreyer, Anna, Vornholt, Tobias, Barteczko, Ursela, Buchholz, Luzia, Drews, Gila, Ho, Uyen Linh, Jackowski, Marta Eva, Kracht, Melissa, Lüders, Janina, Bleckwehl, Tore, Rositzka, Lukas, Ruwe, Matthias, Wittchen, Manuel, Lutter, Petra, Müller, Kristian, Kalinowski, Jörn

“…Biosensors have emerged as a valuable tool with high specificity and sensitivity for fast and reliable detection of hazardous substances in drinking water…”
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Estimation of pathogenic potential of an environmental Pseudomonas aeruginosa isolate using comparative genomics by Berger, Carola, Rückert, Christian, Blom, Jochen, Rabaey, Korneel, Kalinowski, Jörn, Rosenbaum, Miriam A.

“…The isolation and sequencing of new strains of Pseudomonas aeruginosa created an extensive dataset of closed genomes. Many of the publicly available genomes…”
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A flavin-dependent halogenase from metagenomic analysis prefers bromination over chlorination by Neubauer, Pia R, Widmann, Christiane, Wibberg, Daniel, Schröder, Lea, Frese, Marcel, Kottke, Tilman, Kalinowski, Jörn, Niemann, Hartmut H, Sewald, Norbert

“…Flavin-dependent halogenases catalyse halogenation of aromatic compounds. In most cases, this reaction proceeds with high regioselectivity and requires only…”
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Construction of a Prophage-Free Variant of Corynebacterium glutamicum ATCC 13032 for Use as a Platform Strain for Basic Research and Industrial Biotechnology by BAUMGART, Meike, UNTHAN, Simon, RÜCKERT, Christian, SIVALINGAM, Jasintha, GRÜNBERGER, Alexander, KALINOWSKI, Jörn, BOTT, Michael, NOACK, Stephan, FRUNZKE, Julia

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Histone binding of ASF1 is required for fruiting body development but not for genome stability in the filamentous fungus Sordaria macrospora by Breuer, Jan, Busche, Tobias, Kalinowski, Jörn, Nowrousian, Minou

“…Histone chaperones are proteins that are involved in nucleosome assembly and disassembly and can therefore influence all DNA-dependent processes including…”
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New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp. MP131-18 by Paulus, Constanze, Rebets, Yuriy, Tokovenko, Bogdan, Nadmid, Suvd, Terekhova, Larisa P., Myronovskyi, Maksym, Zotchev, Sergey B., Rückert, Christian, Braig, Simone, Zahler, Stefan, Kalinowski, Jörn, Luzhetskyy, Andriy

“…Marine actinobacteria are drawing more and more attention as a promising source of new natural products. Here we report isolation, genome sequencing and…”
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Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia by Blifernez-Klassen, Olga, Klassen, Viktor, Wibberg, Daniel, Cebeci, Enis, Henke, Christian, Rückert, Christian, Chaudhari, Swapnil, Rupp, Oliver, Blom, Jochen, Winkler, Anika, Al-Dilaimi, Arwa, Goesmann, Alexander, Sczyrba, Alexander, Kalinowski, Jörn, Bräutigam, Andrea, Kruse, Olaf

“…Bacteria occupy all major ecosystems and maintain an intensive relationship to the eukaryotes, developing together into complex biomes (i.e., phycosphere and…”
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The sporothriolides. A new biosynthetic family of fungal secondary metabolites by Tian, Dong-Song, Kuhnert, Eric, Ouazzani, Jamal, Wibberg, Daniel, Kalinowski, Jörn, Cox, Russell J

“…The biosynthetic gene cluster of the antifungal metabolite sporothriolide 1 was identified from three producing ascomycetes: Hypomontagnella monticulosa MUCL…”
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Pseudomonas carnis sp. nov., isolated from meat by Lick, Sonja, Kröckel, Lothar, Wibberg, Daniel, Winkler, Annika, Blom, Jochen, Bantleon, Annegret, Goesmann, Alexander, Kalinowski, Jörn

“…During investigations of spoilage-associated meat microbiota, isolates were found in two different laboratories showing highest similarities to DSM 29167 , DSM…”
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Metabolic survey of Botryococcus braunii: Impact of the physiological state on product formation by Blifernez-Klassen, Olga, Chaudhari, Swapnil, Klassen, Viktor, Wördenweber, Robin, Steffens, Tim, Cholewa, Dominik, Niehaus, Karsten, Kalinowski, Jörn, Kruse, Olaf

“…The microalga Botryococcus braunii is widely regarded as a potential renewable and sustainable source for industrial applications because of its capability to…”
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Functional Characterization of a Small Alarmone Hydrolase in Corynebacterium glutamicum by Ruwe, Matthias, Rückert, Christian, Kalinowski, Jörn, Persicke, Marcus

“…The (pp)pGpp metabolism is an important component of bacterial physiology as it is involved in various stress responses and mechanisms of cell homeostasis,…”
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New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures by Liu, Ying, Brandt, David, Ishino, Sonoko, Ishino, Yoshizumi, Koonin, Eugene V., Kalinowski, Jörn, Krupovic, Mart, Prangishvili, David

“…Summary Viruses infecting hyperthermophilic archaea of the phylum Crenarchaeota display enormous morphological and genetic diversity, and are classified into…”
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