Search Results - "K. Halgamuge, Saman"

A Recursive Decomposition Method for Large Scale Continuous Optimization by Sun, Yuan, Kirley, Michael, Halgamuge, Saman K.

“…Cooperative co-evolution (CC) is an evolutionary computation framework that can be used to solve high-dimensional optimization problems via a…”
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Algorithm selection for black-box continuous optimization problems: A survey on methods and challenges by Muñoz, Mario A., Sun, Yuan, Kirley, Michael, Halgamuge, Saman K.

“…Selecting the most appropriate algorithm to use when attempting to solve a black-box continuous optimization problem is a challenging task. Such problems…”
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A Survey of Algorithms for Distributed Charging Control of Electric Vehicles in Smart Grid by Nimalsiri, Nanduni I., Mediwaththe, Chathurika P., Ratnam, Elizabeth L., Shaw, Marnie, Smith, David B., Halgamuge, Saman K.

“…Electric vehicles (EVs) are an eco-friendly alternative to vehicles with internal combustion engines. Despite their environmental benefits, the massive…”
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Energy, environmental and economical saving potential of data centers with various economizers across Australia by Habibi Khalaj, Ali, Scherer, Thomas, K. Halgamuge, Saman

“…•Developed an energy, exergy, environment and economic model for data center’s cooling system.•Annual and monthly saving potential of economizers depend on…”
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CONTRA: copy number analysis for targeted resequencing by JASON LI, LUPAT, Richard, AMARASINGHE, Kaushalya C, THOMPSON, Ella R, DOYLE, Maria A, RYLAND, Georgina L, TOTHILL, Richard W, HALGAMUGE, Saman K, CAMPBELL, Ian G, GORRINGE, Kylie L

“…In light of the increasing adoption of targeted resequencing (TR) as a cost-effective strategy to identify disease-causing variants, a robust method for copy…”
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CoNVEX: copy number variation estimation in exome sequencing data using HMM by Amarasinghe, Kaushalya C, Li, Jason, Halgamuge, Saman K

“…One of the main types of genetic variations in cancer is Copy Number Variations (CNV). Whole exome sequencing (WES) is a popular alternative to whole genome…”
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ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing by Jayasundara, Duleepa, Saeed, I, Maheswararajah, Suhinthan, Chang, B C, Tang, S-L, Halgamuge, Saman K

“…The combined effect of a high replication rate and the low fidelity of the viral polymerase in most RNA viruses and some DNA viruses results in the formation…”
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Multiobjective Evolution of Fuzzy Rough Neural Network via Distributed Parallelism for Stock Prediction by Cao, Bin, Zhao, Jianwei, Lv, Zhihan, Gu, Yu, Yang, Peng, Halgamuge, Saman K.

“…Fuzzy rough theory can describe real-world situations in a mathematically effective and interpretable way, while evolutionary neural networks can be utilized…”
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A Review on efficient thermal management of air- and liquid-cooled data centers: From chip to the cooling system by Habibi Khalaj, Ali, Halgamuge, Saman K.

“…•Discussed thermal challenges of data centers.•Reviewed thermal management techniques of data centers from chip to the cooling system.•Compered various…”
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ENVirT: inference of ecological characteristics of viruses from metagenomic data by Jayasundara, Duleepa, Herath, Damayanthi, Senanayake, Damith, Saeed, Isaam, Yang, Cheng-Yu, Sun, Yuan, Chang, Bill C, Tang, Sen-Lin, Halgamuge, Saman K

“…Estimating the parameters that describe the ecology of viruses,particularly those that are novel, can be made possible using metagenomic approaches. However,…”
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Bioinformatics pipelines for targeted resequencing and whole-exome sequencing of human and mouse genomes: a virtual appliance approach for instant deployment by Li, Jason, Doyle, Maria A, Saeed, Isaam, Wong, Stephen Q, Mar, Victoria, Goode, David L, Caramia, Franco, Doig, Ken, Ryland, Georgina L, Thompson, Ella R, Hunter, Sally M, Halgamuge, Saman K, Ellul, Jason, Dobrovic, Alexander, Campbell, Ian G, Papenfuss, Anthony T, McArthur, Grant A, Tothill, Richard W

“…Targeted resequencing by massively parallel sequencing has become an effective and affordable way to survey small to large portions of the genome for genetic…”
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Binning sequences using very sparse labels within a metagenome by Chan, Chon-Kit Kenneth, Hsu, Arthur L, Halgamuge, Saman K, Tang, Sen-Lin

“…In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most…”
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The oligonucleotide frequency derived error gradient and its application to the binning of metagenome fragments by Saeed, Isaam, Halgamuge, Saman K

“…The characterisation, or binning, of metagenome fragments is an important first step to further downstream analysis of microbial consortia. Here, we propose a…”
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Exploratory Landscape Analysis of Continuous Space Optimization Problems Using Information Content by Munoz, Mario A., Kirley, Michael, Halgamuge, Saman K.

“…Data-driven analysis methods, such as the information content of a fitness sequence, characterize a discrete fitness landscape by quantifying its smoothness,…”
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Towards the stand-alone operation of data centers with free cooling and optimally sized hybrid renewable power generation and energy storage by Habibi Khalaj, Ali, Abdulla, Khalid, Halgamuge, Saman K.

“…Recent increases in the global demand for IT services have increased the power consumption, total ownership costs and environmental footprint of data centers…”
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Potential of air-side economizers for data center cooling: A case study for key Australian cities by Siriwardana, Jayantha, Jayasekara, Saliya, Halgamuge, Saman K.

“…► Provision of low cost cooling for data centers is highly sought with the increase of cost of electricity and heat dissipation volumes. ► Many Australian…”
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Coordinated Charge and Discharge Scheduling of Electric Vehicles for Load Curve Shaping by Nimalsiri, Nanduni I., Ratnam, Elizabeth L., Smith, David B., Mediwaththe, Chathurika P., Halgamuge, Saman K.

“…In this paper, we propose two decentralized Electric Vehicle (EV) charge scheduling schemes for shaping the load curve of residential communities connected to…”
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A combined effect absorption chiller for enhanced performance of combined cooling heating and power systems by Jayasekara, Saliya, Halgamuge, Saman K.

“…•Propose a method that enhances the COP compared to conventional methods.•A theoretical approach in fine tuning double and combined effect absorption…”
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Inferring copy number and genotype in tumour exome data by Amarasinghe, Kaushalya C, Li, Jason, Hunter, Sally M, Ryland, Georgina L, Cowin, Prue A, Campbell, Ian G, Halgamuge, Saman K

“…Using whole exome sequencing to predict aberrations in tumours is a cost effective alternative to whole genome sequencing, however is predominantly used for…”
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Musculoskeletal Static Workspace Analysis of the Human Shoulder as a Cable-Driven Robot by Lau, Darwin, Eden, Jonathan, Oetomo, Denny, Halgamuge, Saman K.

“…The workspace analysis of cable-driven parallel manipulators has been widely studied, where the cables have been considered as ideal force generators. Due to…”
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