Search Results - "Jong, Victor L"

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    Meta-analysis approach as a gene selection method in class prediction: does it improve model performance? A case study in acute myeloid leukemia by Novianti, Putri W, Jong, Victor L, Roes, Kit C B, Eijkemans, Marinus J C

    Published in BMC bioinformatics (11-04-2017)
    “…Aggregating gene expression data across experiments via meta-analysis is expected to increase the precision of the effect estimates and to increase the…”
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    Journal Article
  3. 3

    Prenatal maternal distress and immune cell epigenetic profiles at 3‐months of age by Letourneau, Nicole, Ntanda, Henry, Jong, Victor L., Mahinpey, Newsha, Giesbrecht, Gerald, Ross, Kharah M.

    Published in Developmental psychobiology (01-07-2021)
    “…Background Prenatal maternal distress predicts altered offspring immune outcomes, potentially via altered epigenetics. The role of different kinds of prenatal…”
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  4. 4

    An Application of Sequential Meta-Analysis to Gene Expression Studies by Novianti, Putri W., Van Der Tweel, Ingeborg, Jong, Victor L., Roes, Kit C. B., Eijkemans, Marinus J. C.

    Published in Cancer informatics (01-01-2015)
    “…Most of the discoveries from gene expression data are driven by a study claiming an optimal subset of genes that play a key role in a specific disease…”
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    Journal Article
  5. 5

    Proinflammatory Cytokine Responses in Extra-Respiratory Tissues During Severe Influenza by Short, Kirsty R., Veeris, Rebecca, Leijten, Lonneke M., van den Brand, Judith M., Jong, Victor L., Stittelaar, Koert, Osterhaus, Ab D. M. E., Andeweg, Arno, van Riel, Debby

    Published in The Journal of infectious diseases (17-10-2017)
    “…Severe influenza is often associated with disease manifestations outside the respiratory tract. While proinflammatory cytokines can be detected in the lungs…”
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  6. 6

    Identification of differentially expressed peptides in high-throughput proteomics data by van Ooijen, Michiel P, Jong, Victor L, Eijkemans, Marinus J C, Heck, Albert J R, Andeweg, Arno C, Binai, Nadine A, van den Ham, Henk-Jan

    Published in Briefings in bioinformatics (28-09-2018)
    “…Abstract With the advent of high-throughput proteomics, the type and amount of data pose a significant challenge to statistical approaches used to validate…”
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  7. 7

    Factors affecting the accuracy of a class prediction model in gene expression data by Novianti, Putri W, Jong, Victor L, Roes, Kit C B, Eijkemans, Marinus J C

    Published in BMC bioinformatics (21-06-2015)
    “…Class prediction models have been shown to have varying performances in clinical gene expression datasets. Previous evaluation studies, mostly done in the…”
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  8. 8

    Selecting a classification function for class prediction with gene expression data by Jong, Victor L, Novianti, Putri W, Roes, Kit C B, Eijkemans, Marinus J C

    Published in Bioinformatics (15-06-2016)
    “…Class predicting with gene expression is widely used to generate diagnostic and/or prognostic models. The literature reveals that classification functions…”
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    Journal Article
  9. 9

    Host proteome correlates of vaccine-mediated enhanced disease in a mouse model of respiratory syncytial virus infection by van Diepen, Angela, Brand, H Kim, de Waal, Leon, Bijl, Maarten, Jong, Victor L, Kuiken, Thijs, van Amerongen, Geert, van den Ham, Henk-Jan, Eijkemans, Marinus J, Osterhaus, Albert D M E, Hermans, Peter W M, Andeweg, Arno C

    Published in Journal of virology (01-05-2015)
    “…Respiratory syncytial virus (RSV) is the leading cause of lower respiratory tract infections in infants. Despite over 50 years of research, to date no safe and…”
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    Journal Article
  10. 10

    Exploring homogeneity of correlation structures of gene expression datasets within and between etiological disease categories by Jong, Victor L, Novianti, Putri W, Roes, Kit C B, Eijkemans, Marinus J C

    “…The literature shows that classifiers perform differently across datasets and that correlations within datasets affect the performance of classifiers. The…”
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  11. 11

    An Application of Sequential Meta-Analysis to Gene Expression Studies by Putri W. Novianti, Ingeborg Van Der Tweel, Victor L. Jong, Kit C. B. Roes, Marinus J. C. Eijkemans

    Published in Cancer informatics (01-01-2015)
    “…Most of the discoveries from gene expression data are driven by a study claiming an optimal subset of genes that play a key role in a specific disease…”
    Get full text
    Journal Article