Search Results - "Jo, Toshiaki S."
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Correlation between the number of eDNA particles and species abundance is strengthened by warm temperature: simulation and meta-analysis
Published in Hydrobiologia (01-01-2023)“…Precise abundance estimation via environmental DNA (eDNA) analysis is challenging because of myriad effects of biotic/abiotic factors on eDNA persistence in…”
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Methodological considerations for aqueous environmental RNA collection, preservation, and extraction
Published in Analytical sciences (01-10-2023)“…Environmental RNA (eRNA) analysis is expected to infer species' physiological information (health status, developmental stage, and environmental stress…”
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Pooling of intra-site measurements inflates variability of the correlation between environmental DNA concentration and organism abundance
Published in Environmental monitoring and assessment (01-08-2023)“…Environmental DNA (eDNA) analysis can promote efficient ecosystem monitoring and resource management. However, limited knowledge of the factors affecting the…”
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A higher DNA damage rate in aqueous eDNA particles suggests intra‐cellular eDNA degradation in cellular environments
Published in Environmental DNA (Hoboken, N.J.) (01-03-2023)“…A higher DNA quality in an environmental DNA (eDNA) sample is crucial for the improved and precise assessment of biodiversity via eDNA analysis. However, the…”
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Utilizing the state of environmental DNA (eDNA) to incorporate time-scale information into eDNA analysis
Published in Proceedings of the Royal Society. B, Biological sciences (31-05-2023)“…Environmental DNA (eDNA) analysis allows cost-effective and non-destructive biomonitoring with a high detection sensitivity in terrestrial and aquatic…”
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Synthesizing the relationships between environmental DNA concentration and freshwater macrophyte abundance: a systematic review and meta-analysis
Published in Hydrobiologia (01-04-2024)“…Environmental DNA (eDNA) analysis can facilitate surveillance of invasive aquatic plant’s distribution. However, it is still questionable how accurately eDNA…”
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Validating post-enrichment steps in environmental RNA analysis for improving its availability from water samples
Published in Functional & integrative genomics (01-12-2023)“…Environmental RNA (eRNA) analysis is expected to inclusively provide the physiological information of a population and community without individual sampling,…”
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Evaluating the quantitative performance of environmental DNA metabarcoding for freshwater zooplankton community: a case study in Lake Biwa, Japan
Published in Environmental science and pollution research international (01-10-2024)“…Zooplankton monitoring is important for understanding their population dynamics and life history, ecosystem health, and environmental changes. Compared with…”
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Comparative evaluation for the performance of environmental DNA and RNA analyses targeting mitochondrial and nuclear genes from ayu (Plecoglossus altivelis)
Published in Environmental monitoring and assessment (01-04-2024)“…Environmental DNA and RNA (eDNA and eRNA; collectively eNA) analyses have the potential for non-invasive and cost-efficient biomonitoring compared with…”
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Methodological assessment for efficient collection of Schistosoma mansoni environmental DNA and improved schistosomiasis surveillance in tropical wetlands
Published in Acta tropica (01-12-2024)“…•Rapid surveillance of Schistosoma transmission risk areas is vital.•Laboratory experiments and field surveys were conducted.•Targeting >3 µm size fraction was…”
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Larger particle size distribution of environmental RNA compared to environmental DNA: a case study targeting the mitochondrial cytochrome b gene in zebrafish (Danio rerio) using experimental aquariums
Published in Die Naturwissenschaften (01-04-2024)“…Environmental RNA (eRNA) analysis is conventionally expected to infer physiological information about organisms within their ecosystems, whereas environmental…”
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Sensitive and efficient surveillance of Japanese giant salamander (Andrias japonicus) distribution in western Japan using multi-copy nuclear DNA marker
Published in Limnology (01-04-2024)“…Japanese giant salamander ( Andrias japonicus ) is one of the largest amphibian species in the world and an iconic species in Japan. However, as its…”
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Can nuclear aquatic environmental DNA be a genetic marker for the accurate estimation of species abundance?
Published in Die Naturwissenschaften (01-08-2022)“…Environmental DNA (eDNA) analysis is a promising tool for the sensitive and effective monitoring of species distribution and abundance. Traditional eDNA…”
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Factors affecting biphasic degradation of eDNA released by Japanese jack mackerel (Trachurus japonicus)
Published in Journal of experimental marine biology and ecology (01-11-2023)“…Understanding environmental DNA (eDNA) persistence and degradation processes is necessary for the precise assessment of species distribution and abundance in…”
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