Search Results - "Jeremy R. H. Tame"

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    Molecular basis of hemoglobin adaptation in the high-flying bar-headed goose by Natarajan, Chandrasekhar, Jendroszek, Agnieszka, Kumar, Amit, Weber, Roy E, Tame, Jeremy R H, Fago, Angela, Storz, Jay F

    Published in PLoS genetics (02-04-2018)
    “…During the adaptive evolution of a particular trait, some selectively fixed mutations may be directly causative and others may be purely compensatory. The…”
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    Structural basis of CXC chemokine receptor 1 ligand binding and activation by Ishimoto, Naito, Park, Jae-Hyun, Kawakami, Kouki, Tajiri, Michiko, Mizutani, Kenji, Akashi, Satoko, Tame, Jeremy R. H., Inoue, Asuka, Park, Sam-Yong

    Published in Nature communications (11-07-2023)
    “…Neutrophil granulocytes play key roles in innate immunity and shaping adaptive immune responses. They are attracted by chemokines to sites of infection and…”
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    The structural basis for an essential subunit interaction in influenza virus RNA polymerase by Park, Sam-Yong, Kawaguchi, Atsushi, Yoshida, Hisashi, Obayashi, Eiji, Nagata, Kyosuke, Tame, Jeremy R. H, Shibayama, Naoya, Kawai, Fumihiro

    Published in Nature (28-08-2008)
    “…Influenza A virus is a major human and animal pathogen with the potential to cause catastrophic loss of life. The virus reproduces rapidly, mutates frequently…”
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    The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM by Takahashi, Katsuya, Lee, Yongchan, Fago, Angela, Bautista, Naim M., Storz, Jay F., Kawamoto, Akihiro, Kurisu, Genji, Nishizawa, Tomohiro, Tame, Jeremy R. H.

    Published in Nature communications (02-08-2024)
    “…The principal effect controlling the oxygen affinity of vertebrate haemoglobins (Hbs) is the allosteric switch between R and T forms with relatively high and…”
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    Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2 by Park, Jae-Hyun, Kawakami, Kouki, Ishimoto, Naito, Ikuta, Tatsuya, Ohki, Mio, Ekimoto, Toru, Ikeguchi, Mitsunori, Lee, Dong-Sun, Lee, Young-Ho, Tame, Jeremy R. H., Inoue, Asuka, Park, Sam-Yong

    Published in Nature communications (06-11-2023)
    “…Hydroxycarboxylic acid receptors (HCAR1, HCAR2, and HCAR3) transduce G i/o signaling upon biding to molecules such as lactic acid, butyric acid and…”
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    Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes by Senoo, Akinobu, Hoshino, Masato, Shiomi, Toshiki, Nakakido, Makoto, Nagatoishi, Satoru, Kuroda, Daisuke, Nakagawa, Ichiro, Tame, Jeremy R. H., Caaveiro, Jose M. M., Tsumoto, Kouhei

    Published in Scientific reports (05-03-2024)
    “…In Gram-positive bacteria, sophisticated machineries to acquire the heme group of hemoglobin (Hb) have evolved to extract the precious iron atom contained in…”
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    Capturing the Hemoglobin Allosteric Transition in a Single Crystal Form by Shibayama, Naoya, Sugiyama, Kanako, Tame, Jeremy R. H, Park, Sam-Yong

    Published in Journal of the American Chemical Society (02-04-2014)
    “…Allostery in many oligomeric proteins has been postulated to occur via a ligand-binding-driven conformational transition from the tense (T) to relaxed (R)…”
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    Structural Basis of Sequential and Concerted Cooperativity by Morea, Veronica, Angelucci, Francesco, Tame, Jeremy R H, Di Cera, Enrico, Bellelli, Andrea

    Published in Biomolecules (Basel, Switzerland) (07-11-2022)
    “…Allostery is a property of biological macromolecules featuring cooperative ligand binding and regulation of ligand affinity by effectors. The definition was…”
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    The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata by Kamata, Kenichi, Mizutani, Kenji, Takahashi, Katsuya, Marchetti, Roberta, Silipo, Alba, Addy, Christine, Park, Sam-Yong, Fujii, Yuki, Fujita, Hideaki, Konuma, Tsuyoshi, Ikegami, Takahisa, Ozeki, Yasuhiro, Tame, Jeremy R. H.

    Published in Scientific reports (16-12-2020)
    “…SeviL is a recently isolated lectin found to bind to the linear saccharides of the ganglioside GM1b (Neu5Ac α (2-3)Gal β (1-3)GalNAc β (1-4)Gal β (1-4)Glc) and…”
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    Using symmetry to drive new protein assemblies by Tame, Jeremy R. H.

    Published in Nature chemistry (01-12-2023)
    “…Recent improvements in de novo protein design are likely to support a broad range of applications, but larger complexes will be easier to create if a building…”
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    Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein by Voet, Arnout R. D., Noguchi, Hiroki, Addy, Christine, Zhang, Kam Y. J., Tame, Jeremy R. H.

    Published in Angewandte Chemie International Edition (17-08-2015)
    “…We have engineered a metal‐binding site into the novel artificial β‐propeller protein Pizza. This new Pizza variant carries two nearly identical domains per…”
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    Influence of structural symmetry on protein dynamics by Matsunaga, Yasuhiro, Koike, Ryotaro, Ota, Motonori, Tame, Jeremy R H, Kidera, Akinori

    Published in PloS one (26-11-2012)
    “…Structural symmetry in homooligomeric proteins has intrigued many researchers over the past several decades. However, the implication of protein symmetry is…”
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    Autotransporter passenger proteins: virulence factors with common structural themes by Nishimura, Kaoru, Tajima, Nami, Yoon, Young-Ho, Park, Sam-Yong, Tame, Jeremy R. H.

    “…Autotransporter proteins are virulence factors associated with a wide variety of diseases caused by pathogenic Gram-negative bacteria, and they play a variety…”
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    Limited tolerance towards folded elements during secretion of the autotransporter Hbp by Jong, Wouter S.P, ten Hagen-Jongman, Corinne M, den Blaauwen, Tanneke, Jan Slotboom, Dirk, Tame, Jeremy R.H, Wickström, David, de Gier, Jan-Willem, Otto, Ben R, Luirink, Joen

    Published in Molecular microbiology (01-03-2007)
    “…Many virulence factors secreted by pathogenic Gram-negative bacteria belong to the autotransporter (AT) family. ATs consist of a passenger domain, which is the…”
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    NMR-guided directed evolution by Bhattacharya, Sagar, Margheritis, Eleonora G., Takahashi, Katsuya, Kulesha, Alona, D’Souza, Areetha, Kim, Inhye, Yoon, Jennifer H., Tame, Jeremy R. H., Volkov, Alexander N., Makhlynets, Olga V., Korendovych, Ivan V.

    Published in Nature (London) (13-10-2022)
    “…Directed evolution is a powerful tool for improving existing properties and imparting completely new functionalities to proteins 1 – 4 . Nonetheless, its…”
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    Enzyme dynamics—a brief review by Tame, Jeremy R. H.

    Published in Biophysical reviews (01-06-2023)
    “…Debate has been simmering for some years regarding the importance of internal thermal motions of enzymes to catalysis. Recent developments in protein design…”
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