Search Results - "Jansen, Jeroen J."

Birds exploit herbivore‐induced plant volatiles to locate herbivorous prey by Amo, Luisa, Jansen, Jeroen J, Dam, Nicole M, Dicke, Marcel, Visser, Marcel E, Turlings, Ted

“…Arthropod herbivory induces plant volatiles that can be used by natural enemies of the herbivores to find their prey. This has been studied mainly for…”
Get full text

Evaluation and comparison of unsupervised methods for the extraction of spatial patterns from mass spectrometry imaging data (MSI) by Prasad, Mridula, Postma, Geert, Franceschi, Pietro, Buydens, Lutgarde M. C., Jansen, Jeroen J.

“…For the extraction of spatially important regions from mass spectrometry imaging (MSI) data, different clustering methods have been proposed. These clustering…”
Get full text

Convolutional neural networks to predict brain tumor grades and Alzheimer’s disease with MR spectroscopic imaging data by Acquarelli, Jacopo, van Laarhoven, Twan, Postma, Geert J, Jansen, Jeroen J, Rijpma, Anne, van Asten, Sjaak, Heerschap, Arend, Buydens, Lutgarde M. C, Marchiori, Elena

“…Purpose To evaluate the value of convolutional neural network (CNN) in the diagnosis of human brain tumor or Alzheimer’s disease by MR spectroscopic imaging…”
Get full text

Water quality monitoring based on chemometric analysis of high-resolution phytoplankton data measured with flow cytometry by Tinnevelt, Gerjen H., Lushchikova, Olga, Augustijn, Dillen, Lochs, Mathijs, Geertsma, Rinze W., Rijkeboer, Machteld, Kools, Harrie, Dubelaar, George, Veen, Arnold, Buydens, Lutgarde M.C., Jansen, Jeroen J.

“…River water is an important source of Dutch drinking water. For this reason, continuous monitoring of river water quality is needed. However, comprehensive…”
Get full text

Systematic reduction of hyperspectral images for high-throughput plastic characterization by Ghaffari, Mahdiyeh, Lukkien, Mickey C. J., Omidikia, Nematollah, Tinnevelt, Gerjen H., van Eijk, Marcel C. P., Podchezertsev, Stanislav, Jansen, Jeroen J.

“…Hyperspectral Imaging (HSI) combines microscopy and spectroscopy to assess the spatial distribution of spectroscopically active compounds in objects, and has…”
Get full text

Chemometrics-assisted microfluidic paper-based analytical device for the determination of uric acid by silver nanoparticle plasmon resonance by Hamedpour, Vahid, Postma, Geert J., van den Heuvel, Edwin, Jansen, Jeroen J., Suzuki, Koji, Citterio, Daniel

“…This manuscript reports on the application of chemometric methods for the development of an optimized microfluidic paper-based analytical device (μPAD). As an…”
Get full text

Multi-dimensional flow cytometry analysis reveals increasing changes in the systemic neutrophil compartment during seven consecutive days of endurance exercise by van Staveren, Selma, Ten Haaf, Twan, Klöpping, Margot, Hilvering, Bart, Tinnevelt, Gerjen H, de Ruiter, Karin, Piacentini, Maria F, Roelands, Bart, Meeusen, Romain, de Koning, Jos J, Jansen, Jeroen J, Vrisekoop, Nienke, Koenderman, Leo

“…Endurance exercise is associated with a transient increase in neutrophil counts in the peripheral blood. Here we investigate the impact of intensified…”
Get full text

Plants know where it hurts: root and shoot jasmonic acid induction elicit differential responses in Brassica oleracea by Tytgat, Tom O G, Verhoeven, Koen J F, Jansen, Jeroen J, Raaijmakers, Ciska E, Bakx-Schotman, Tanja, McIntyre, Lauren M, van der Putten, Wim H, Biere, Arjen, van Dam, Nicole M

“…Plants respond to herbivore attack by rapidly inducing defenses that are mainly regulated by jasmonic acid (JA). Due to the systemic nature of induced…”
Get full text

Novel data analysis method for multicolour flow cytometry links variability of multiple markers on single cells to a clinical phenotype by Tinnevelt, Gerjen H., Kokla, Marietta, Hilvering, Bart, van Staveren, Selma, Folcarelli, Rita, Xue, Luzheng, Bloem, Andries C., Koenderman, Leo, Buydens, Lutgarde M. C., Jansen, Jeroen J.

“…Multicolour Flow Cytometry (MFC) produces multidimensional analytical data on the quantitative expression of multiple markers on single cells. This data…”
Get full text

Non-Invasive Monitoring of Inflammation in Inflammatory Bowel Disease Patients during Prolonged Exercise via Exhaled Breath Volatile Organic Compounds by Henderson, Ben, Meurs, Joris, Lamers, Carlijn R, Batista, Guilherme Lopes, Materić, Dušan, Bertinetto, Carlo G, Bongers, Coen C W G, Holzinger, Rupert, Harren, Frans J M, Jansen, Jeroen J, Hopman, Maria T E, Cristescu, Simona M

“…The aim of this study was to investigate volatile organic compounds (VOCs) in exhaled breath as possible non-invasive markers to monitor the inflammatory…”
Get full text

Metabolomic analysis of the interaction between plants and herbivores by Jansen, Jeroen J., Allwood, J. William, Marsden-Edwards, Emma, van der Putten, Wim H., Goodacre, Royston, van Dam, Nicole M.

“…Insect herbivores by necessity have to deal with a large arsenal of plant defence metabolites. The levels of defence compounds may be increased by insect…”
Get full text

Field parasitism rates of caterpillars on Brassica oleracea plants are reliably predicted by differential attraction of Cotesia parasitoids by Poelman, Erik H, Oduor, Ayub M.O, Broekgaarden, Colette, Hordijk, Cornelis A, Jansen, Jeroen J, Van Loon, Joop J.A, Van Dam, Nicole M, Vet, Louise E.M, Dicke, Marcel

“…1. Herbivore-induced plant volatiles (HIPVs) play an important role in host location of parasitoid wasps and may benefit the plant by top-down control of its…”
Get full text

ecogenomic analysis of herbivore‐induced plant volatiles in Brassica juncea by Mathur, Vartika, Tytgat, Tom O. G, Hordijk, Cornelis A, Harhangi, Harry R, Jansen, Jeroen J, Reddy, A. Sankara, Harvey, Jeffrey A, Vet, Louise E. M, Dam, Nicole M

“…Upon herbivore feeding, plants emit complex bouquets of induced volatiles that may repel insect herbivores as well as attract parasitoids or predators. Due to…”
Get full text

Breaking with trends in pre-processing? by Engel, Jasper, Gerretzen, Jan, Szymańska, Ewa, Jansen, Jeroen J., Downey, Gerard, Blanchet, Lionel, Buydens, Lutgarde M.C.

“…•Pre-processing can make or break data analysis.•Selection of appropriate pre-processing strategies is crucial.•Three types of selection approaches seem…”
Get full text

Exhaled Breath Reflects Prolonged Exercise and Statin Use during a Field Campaign by Henderson, Ben, Lopes Batista, Guilherme, Bertinetto, Carlo G, Meurs, Joris, Materić, Dušan, Bongers, Coen C W G, Allard, Neeltje A E, Eijsvogels, Thijs M H, Holzinger, Rupert, Harren, Frans J M, Jansen, Jeroen J, Hopman, Maria T E, Cristescu, Simona M

“…Volatile organic compounds (VOCs) in exhaled breath provide insights into various metabolic processes and can be used to monitor physiological response to…”
Get full text

Preanalytical Pitfalls in Untargeted Plasma Nuclear Magnetic Resonance Metabolomics of Endocrine Hypertension by Bliziotis, Nikolaos G, Kluijtmans, Leo A J, Tinnevelt, Gerjen H, Reel, Parminder, Reel, Smarti, Langton, Katharina, Robledo, Mercedes, Pamporaki, Christina, Pecori, Alessio, Van Kralingen, Josie, Tetti, Martina, Engelke, Udo F H, Erlic, Zoran, Engel, Jasper, Deutschbein, Timo, Nölting, Svenja, Prejbisz, Aleksander, Richter, Susan, Adamski, Jerzy, Januszewicz, Andrzej, Ceccato, Filippo, Scaroni, Carla, Dennedy, Michael C, Williams, Tracy A, Lenzini, Livia, Gimenez-Roqueplo, Anne-Paule, Davies, Eleanor, Fassnacht, Martin, Remde, Hanna, Eisenhofer, Graeme, Beuschlein, Felix, Kroiss, Matthias, Jefferson, Emily, Zennaro, Maria-Christina, Wevers, Ron A, Jansen, Jeroen J, Deinum, Jaap, Timmers, Henri J L M

“…Despite considerable morbidity and mortality, numerous cases of endocrine hypertension (EHT) forms, including primary aldosteronism (PA), pheochromocytoma and…”
Get full text

Variable Selection in Untargeted Metabolomics and the Danger of Sparsity by Tinnevelt, Gerjen H., Engelke, Udo F.H., Wevers, Ron A., Veenhuis, Stefanie, Willemsen, Michel A., Coene, Karlien L.M., Kulkarni, Purva, Jansen, Jeroen J.

“…The goal of metabolomics is to measure as many metabolites as possible in order to capture biomarkers that may indicate disease mechanisms. Variable selection…”
Get full text

Report of Path Modelling Workshop, Zaandam, The Netherlands, 25–26 April 2022 by Jansen, Jeroen J., Måge, Ingrid

Get full text

Cost-benefit analysis of calibration model maintenance strategies for process monitoring by Schoot, Mark, Kapper, Christiaan, van Kessel, Gijs, Postma, Geert, Buydens, Lutgarde MC, Jansen, Jeroen J.

“…The long-term prediction performance of spectroscopic calibration models is a critical factor to monitor or control many production processes. Over time, new…”
Get full text

Simple and Effective Way for Data Preprocessing Selection Based on Design of Experiments by Gerretzen, Jan, Szymańska, Ewa, Jansen, Jeroen J, Bart, Jacob, van Manen, Henk-Jan, van den Heuvel, Edwin R, Buydens, Lutgarde M. C

“…The selection of optimal preprocessing is among the main bottlenecks in chemometric data analysis. Preprocessing currently is a burden, since a multitude of…”
Get full text