Search Results - "Jang, Woo Dae"
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Genomic and metabolic analysis of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber
Published in Biotechnology and bioengineering (01-12-2019)“…Bacterial cellulose nanofiber (CNF) is a polymer with a wide range of potential industrial applications. Several Komagataeibacter species, including…”
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Drugs repurposed for COVID-19 by virtual screening of 6,218 drugs and cell-based assay
Published in Proceedings of the National Academy of Sciences - PNAS (27-07-2021)“…The COVID-19 pandemic caused by SARS-CoV-2 is an unprecedentedly significant health threat, prompting the need for rapidly developing antiviral drugs for the…”
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Systems Metabolic Engineering Strategies: Integrating Systems and Synthetic Biology with Metabolic Engineering
Published in Trends in biotechnology (Regular ed.) (01-08-2019)“…Metabolic engineering allows development of microbial strains efficiently producing chemicals and materials, but it requires much time, effort, and cost to…”
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An interactive metabolic map of bio-based chemicals
Published in Trends in biotechnology (Regular ed.) (01-01-2023)“…Metabolic engineering for the bio-based production of chemicals requires thorough understanding of metabolic reactions including enzymes, cofactors, reactants,…”
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A comprehensive metabolic map for production of bio-based chemicals
Published in Nature catalysis (01-01-2019)“…Production of industrial chemicals using renewable biomass feedstock is becoming increasingly important to address limited fossil resources, climate change and…”
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Microbial production of an aromatic homopolyester
Published in Trends in biotechnology (Regular ed.) (01-11-2024)“…A homo-aromatic polyester was produced from glucose for the first time.Aromatic polyhydroxyalkanoate (PHA) was produced to the highest titer yet achieved.3D…”
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PredAOT: a computational framework for prediction of acute oral toxicity based on multiple random forest models
Published in BMC bioinformatics (24-02-2023)“…Acute oral toxicity of drug candidates can lead to drug development failure; thus, predicting the acute oral toxicity of small compounds is important for…”
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Microbial production of multiple short-chain primary amines via retrobiosynthesis
Published in Nature communications (08-01-2021)“…Bio-based production of many chemicals is not yet possible due to the unknown biosynthetic pathways. Here, we report a strategy combining retrobiosynthesis and…”
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Bacterial cellulose as an example product for sustainable production and consumption
Published in Microbial biotechnology (01-09-2017)“…Life cycle of bacterial cellulose. Sustainable production and consumption of bio‐based products are showcased using bacterial cellulose as an example…”
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A deep learning approach to evaluate the feasibility of enzymatic reactions generated by retrobiosynthesis
Published in Biotechnology journal (01-05-2021)“…Retrobiosynthesis allows the designing of novel biosynthetic pathways for the production of chemicals and materials through metabolic engineering, but…”
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A safe and sustainable bacterial cellulose nanofiber separator for lithium rechargeable batteries
Published in Proceedings of the National Academy of Sciences - PNAS (24-09-2019)“…Bacterial cellulose nanofiber (BCNF) with high thermal stability produced by an ecofriendly process has emerged as a promising solution to realize safe and…”
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AnoChem: Prediction of chemical structural abnormalities based on machine learning models
Published in Computational and structural biotechnology journal (01-12-2024)“…De novo drug design aims to rationally discover novel and potent compounds while reducing experimental costs during the drug development stage. Despite the…”
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PredPS: Attention-based graph neural network for predicting stability of compounds in human plasma
Published in Computational and structural biotechnology journal (01-01-2023)“…Stability of compounds in the human plasma is crucial for maintaining sufficient systemic drug exposure and considered an essential factor in the early stages…”
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CDI Exerts Anti-Tumor Effects by Blocking the FoxM1-DNA Interaction
Published in Biomedicines (11-07-2022)“…The Forkhead box protein M1 (FoxM1) is an appealing target for anti-cancer therapeutics as this cell proliferation-associated transcription factor is…”
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Production of Carminic Acid by Metabolically Engineered Escherichia coli
Published in Journal of the American Chemical Society (14-04-2021)“…Carminic acid is an aromatic polyketide found in scale insects (i.e., Dactylopius coccus) and is a widely used natural red colorant. It has long been produced…”
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Applications of artificial intelligence to enzyme and pathway design for metabolic engineering
Published in Current opinion in biotechnology (01-02-2022)“…[Display omitted] •The recent applications of AI in enzyme and pathway design are described.•With AI-guided directed evolution, mutant libraries can be…”
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Design, synthesis and evaluation of 3-(2-(substituted benzyloxy)benzylidene) pyrrolidine-2,5-dione derivatives for novel ATX inhibitor
Published in Bioorganic & medicinal chemistry letters (01-12-2024)“…[Display omitted] •Novel ATX inhibitor KR-40795 targets allosteric tunnel and hydrophobic pocket of enzyme.•KR-40795 demonstrates potent ATX inhibition with…”
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NUAK2 Inhibitors, KHKI-01128 and KHKI-01215, Exhibit Potent Anticancer Activity Against SW480 Colorectal Cancer Cells
Published in Anticancer research (01-07-2024)“…NUAK family kinase 2 (NUAK2) is a promising target for cancer therapeutics due to its reported role in protein phosphorylation, a critical process in cancer…”
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Systematic and Comparative Evaluation of Software Programs for Template‐Based Modeling of Protein Structures
Published in Biotechnology journal (01-06-2020)“…Modeling protein structures is critical for understanding protein functions in various biological and biotechnological studies. Among representative protein…”
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Quantitative assessment of kinase selectivity based the water-ring network in protein binding sites using molecular dynamics simulations
Published in Journal of molecular liquids (01-09-2016)“…Protein kinases are implicated in a variety of diseases, such as cancer and inflammation, and are thus an important target for the pharmaceutical industry…”
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